RNA–Protein interactions for RNA: ENST00000471703.5

STRC-209, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 3,364 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-209ENST00000471703 CCNB3Q8WWL7 1395 aa12.28□□□□□ -0.44
STRC-209ENST00000471703 CNGB1Q14028 1251 aaPredicted RBP12.27□□□□□ -0.44
STRC-209ENST00000471703 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
STRC-209ENST00000471703 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
STRC-209ENST00000471703 MIER1Q8N108 512 aa12.25□□□□□ -0.45
STRC-209ENST00000471703 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
STRC-209ENST00000471703 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
STRC-209ENST00000471703 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
STRC-209ENST00000471703 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
STRC-209ENST00000471703 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
STRC-209ENST00000471703 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
STRC-209ENST00000471703 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
STRC-209ENST00000471703 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
STRC-209ENST00000471703 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
STRC-209ENST00000471703 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
STRC-209ENST00000471703 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
STRC-209ENST00000471703 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
STRC-209ENST00000471703 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
STRC-209ENST00000471703 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
STRC-209ENST00000471703 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
STRC-209ENST00000471703 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
STRC-209ENST00000471703 FHAD1B1AJZ9 1412 aa12.16□□□□□ -0.46
STRC-209ENST00000471703 PCF11O94913 1555 aaKnown RBP12.16□□□□□ -0.46
STRC-209ENST00000471703 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
STRC-209ENST00000471703 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
STRC-209ENST00000471703 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
STRC-209ENST00000471703 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
STRC-209ENST00000471703 RRP7BPQ9NSQ0 103 aa12.13□□□□□ -0.47
STRC-209ENST00000471703 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
STRC-209ENST00000471703 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
STRC-209ENST00000471703 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
STRC-209ENST00000471703 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
STRC-209ENST00000471703 CASKIN1Q8WXD9 1431 aa12.08□□□□□ -0.48
STRC-209ENST00000471703 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
STRC-209ENST00000471703 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
STRC-209ENST00000471703 FMN1Q68DA7 1419 aa12.06□□□□□ -0.48
STRC-209ENST00000471703 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
STRC-209ENST00000471703 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
STRC-209ENST00000471703 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
STRC-209ENST00000471703 CUL7Q14999 1698 aa12.04□□□□□ -0.48
STRC-209ENST00000471703 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
STRC-209ENST00000471703 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
STRC-209ENST00000471703 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
STRC-209ENST00000471703 ABCA5Q8WWZ7 1642 aa12.03□□□□□ -0.48
STRC-209ENST00000471703 EFCAB5A4FU69 1503 aa12.02□□□□□ -0.49
STRC-209ENST00000471703 MAPKBP1O60336 1514 aa12.02□□□□□ -0.49
STRC-209ENST00000471703 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
STRC-209ENST00000471703 PTPRKQ15262 1439 aa12□□□□□ -0.49
STRC-209ENST00000471703 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
STRC-209ENST00000471703 WDR97A6NE52 1622 aa12□□□□□ -0.49
STRC-209ENST00000471703 CTTNBP2Q8WZ74 1663 aa11.99□□□□□ -0.49
STRC-209ENST00000471703 FOXD1Q16676 465 aa11.99□□□□□ -0.49
STRC-209ENST00000471703 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
STRC-209ENST00000471703 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
STRC-209ENST00000471703 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
STRC-209ENST00000471703 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
STRC-209ENST00000471703 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
STRC-209ENST00000471703 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
STRC-209ENST00000471703 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
STRC-209ENST00000471703 MAGI3Q5TCQ9 1506 aa11.94□□□□□ -0.5
STRC-209ENST00000471703 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
STRC-209ENST00000471703 ZNF644Q9H582 1327 aaPredicted RBP11.93□□□□□ -0.5
STRC-209ENST00000471703 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
STRC-209ENST00000471703 BCANQ96GW7 911 aa11.92□□□□□ -0.5
STRC-209ENST00000471703 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
STRC-209ENST00000471703 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
STRC-209ENST00000471703 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
STRC-209ENST00000471703 CDK11AQ9UQ88 783 aaPredicted RBP11.91□□□□□ -0.5
STRC-209ENST00000471703 LRRIQ1Q96JM4 1722 aa11.9□□□□□ -0.5
STRC-209ENST00000471703 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.51
STRC-209ENST00000471703 IQGAP2Q13576 1575 aa11.89□□□□□ -0.51
STRC-209ENST00000471703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
STRC-209ENST00000471703 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
STRC-209ENST00000471703 ADAMTS12P58397 1594 aa11.88□□□□□ -0.51
STRC-209ENST00000471703 NAIPQ13075 1403 aa11.88□□□□□ -0.51
STRC-209ENST00000471703 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
STRC-209ENST00000471703 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
STRC-209ENST00000471703 CFDP1Q9UEE9 299 aaPredicted RBP11.87□□□□□ -0.51
STRC-209ENST00000471703 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
STRC-209ENST00000471703 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
STRC-209ENST00000471703 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
STRC-209ENST00000471703 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
STRC-209ENST00000471703 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
STRC-209ENST00000471703 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
STRC-209ENST00000471703 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
STRC-209ENST00000471703 UGGT2Q9NYU1 1516 aa11.83□□□□□ -0.52
STRC-209ENST00000471703 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
STRC-209ENST00000471703 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
STRC-209ENST00000471703 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
STRC-209ENST00000471703 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
STRC-209ENST00000471703 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
STRC-209ENST00000471703 ANP32CO43423 234 aa11.82□□□□□ -0.52
STRC-209ENST00000471703 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
STRC-209ENST00000471703 GRIN2AQ12879 1464 aa11.82□□□□□ -0.52
STRC-209ENST00000471703 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
STRC-209ENST00000471703 PRG4Q92954 1404 aaPredicted RBP11.81□□□□□ -0.52
STRC-209ENST00000471703 WDR62O43379 1518 aa11.81□□□□□ -0.52
STRC-209ENST00000471703 KIAA0586Q9BVV6 1533 aa11.81□□□□□ -0.52
STRC-209ENST00000471703 MPHOSPH9Q99550 1183 aa11.81□□□□□ -0.52
STRC-209ENST00000471703 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms