RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
COMMD6-208ENST00000471682 JPH4Q96JJ6 628 aa25.09■■□□□ 1.61
COMMD6-208ENST00000471682 GOLGA3Q08378 1498 aa25.08■■□□□ 1.6
COMMD6-208ENST00000471682 IQGAP2Q13576 1575 aa25.07■■□□□ 1.6
COMMD6-208ENST00000471682 CTTNBP2Q8WZ74 1663 aa25.05■■□□□ 1.6
COMMD6-208ENST00000471682 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
COMMD6-208ENST00000471682 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
COMMD6-208ENST00000471682 UGGT2Q9NYU1 1516 aa24.99■■□□□ 1.59
COMMD6-208ENST00000471682 RIMBP3CA6NJZ7 1639 aa24.98■■□□□ 1.59
COMMD6-208ENST00000471682 RIMBP3BA6NNM3 1639 aa24.98■■□□□ 1.59
COMMD6-208ENST00000471682 RIMBP3Q9UFD9 1639 aa24.98■■□□□ 1.59
COMMD6-208ENST00000471682 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
COMMD6-208ENST00000471682 CARMIL2Q6F5E8 1435 aa24.93■■□□□ 1.58
COMMD6-208ENST00000471682 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
COMMD6-208ENST00000471682 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
COMMD6-208ENST00000471682 ARAP1Q96P48 1450 aa24.86■■□□□ 1.57
COMMD6-208ENST00000471682 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
COMMD6-208ENST00000471682 KIAA0556O60303 1618 aa24.83■■□□□ 1.56
COMMD6-208ENST00000471682 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
COMMD6-208ENST00000471682 SAMD9Q5K651 1589 aa24.79■■□□□ 1.56
COMMD6-208ENST00000471682 EFCAB5A4FU69 1503 aa24.78■■□□□ 1.56
COMMD6-208ENST00000471682 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
COMMD6-208ENST00000471682 PTPRGP23470 1445 aa24.76■■□□□ 1.55
COMMD6-208ENST00000471682 LOC105371045A0A1W2PR82 267 aa24.69■■□□□ 1.54
COMMD6-208ENST00000471682 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
COMMD6-208ENST00000471682 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
COMMD6-208ENST00000471682 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
COMMD6-208ENST00000471682 CLIP1P30622 1438 aa24.61■■□□□ 1.53
COMMD6-208ENST00000471682 UACAQ9BZF9 1416 aa24.61■■□□□ 1.53
COMMD6-208ENST00000471682 UHRF1BP1LA0JNW5 1464 aa24.61■■□□□ 1.53
COMMD6-208ENST00000471682 FHOD3Q2V2M9 1422 aa24.6■■□□□ 1.53
COMMD6-208ENST00000471682 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
COMMD6-208ENST00000471682 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
COMMD6-208ENST00000471682 ABCC2Q92887 1545 aa24.56■■□□□ 1.52
COMMD6-208ENST00000471682 ABCA8O94911 1581 aa24.55■■□□□ 1.52
COMMD6-208ENST00000471682 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
COMMD6-208ENST00000471682 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
COMMD6-208ENST00000471682 PLB1Q6P1J6 1458 aa24.52■■□□□ 1.52
COMMD6-208ENST00000471682 NPM1P06748 294 aaKnown RBP eCLIP24.48■■□□□ 1.51
COMMD6-208ENST00000471682 RAPGEF6Q8TEU7 1601 aa24.46■■□□□ 1.51
COMMD6-208ENST00000471682 KDM5BQ9UGL1 1544 aa24.46■■□□□ 1.51
COMMD6-208ENST00000471682 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
COMMD6-208ENST00000471682 NUP153P49790 1475 aaKnown RBP24.38■■□□□ 1.49
COMMD6-208ENST00000471682 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
COMMD6-208ENST00000471682 ATP10BO94823 1461 aa24.35■■□□□ 1.49
COMMD6-208ENST00000471682 ZCCHC11Q5TAX3 1644 aaKnown RBP24.35■■□□□ 1.49
COMMD6-208ENST00000471682 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
COMMD6-208ENST00000471682 FYCO1Q9BQS8 1478 aa24.33■■□□□ 1.49
COMMD6-208ENST00000471682 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
COMMD6-208ENST00000471682 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
COMMD6-208ENST00000471682 ASXL2Q76L83 1435 aa24.28■■□□□ 1.48
COMMD6-208ENST00000471682 EPRSP07814 1512 aaKnown RBP24.28■■□□□ 1.48
COMMD6-208ENST00000471682 CCDC18Q5T9S5 1454 aa24.26■■□□□ 1.47
COMMD6-208ENST00000471682 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
COMMD6-208ENST00000471682 ATP1B4Q9UN42 357 aaPredicted RBP24.23■■□□□ 1.47
COMMD6-208ENST00000471682 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
COMMD6-208ENST00000471682 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
COMMD6-208ENST00000471682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.21■■□□□ 1.47
COMMD6-208ENST00000471682 HNRNPUL2Q1KMD3 747 aaKnown RBP24.21■■□□□ 1.47
COMMD6-208ENST00000471682 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
COMMD6-208ENST00000471682 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
COMMD6-208ENST00000471682 CDK13Q14004 1512 aaKnown RBP24.19■■□□□ 1.46
COMMD6-208ENST00000471682 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
COMMD6-208ENST00000471682 GLI2P10070 1586 aa24.16■■□□□ 1.46
COMMD6-208ENST00000471682 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
COMMD6-208ENST00000471682 TRHP20396 242 aaPredicted RBP24.13■■□□□ 1.45
COMMD6-208ENST00000471682 MAP3K1Q13233 1512 aa24.11■■□□□ 1.45
COMMD6-208ENST00000471682 FAM69CQ0P6D2 419 aa24.11■■□□□ 1.45
COMMD6-208ENST00000471682 KIF13AQ9H1H9 1805 aa24.1■■□□□ 1.45
COMMD6-208ENST00000471682 TROQ12816 1431 aaPredicted RBP24.1■■□□□ 1.45
COMMD6-208ENST00000471682 KCNH8Q96L42 1107 aa24.06■■□□□ 1.44
COMMD6-208ENST00000471682 TIAM1Q13009 1591 aa24.03■■□□□ 1.44
COMMD6-208ENST00000471682 CFAP43Q8NDM7 1665 aa24.03■■□□□ 1.44
COMMD6-208ENST00000471682 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
COMMD6-208ENST00000471682 APLP2Q06481 763 aa24.01■■□□□ 1.43
COMMD6-208ENST00000471682 MAP3K4Q9Y6R4 1608 aa24.01■■□□□ 1.43
COMMD6-208ENST00000471682 MAGI3Q5TCQ9 1506 aa24■■□□□ 1.43
COMMD6-208ENST00000471682 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
COMMD6-208ENST00000471682 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
COMMD6-208ENST00000471682 KIF14Q15058 1648 aa23.98■■□□□ 1.43
COMMD6-208ENST00000471682 CD109Q6YHK3 1445 aa23.97■■□□□ 1.43
COMMD6-208ENST00000471682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.43
COMMD6-208ENST00000471682 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
COMMD6-208ENST00000471682 TEX14Q8IWB6 1497 aa23.92■■□□□ 1.42
COMMD6-208ENST00000471682 TTC37Q6PGP7 1564 aa23.9■■□□□ 1.42
COMMD6-208ENST00000471682 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
COMMD6-208ENST00000471682 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
COMMD6-208ENST00000471682 PLCH2O75038 1416 aa23.87■■□□□ 1.41
COMMD6-208ENST00000471682 PHLDB1Q86UU1 1377 aa23.87■■□□□ 1.41
COMMD6-208ENST00000471682 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
COMMD6-208ENST00000471682 SUPT6HQ7KZ85 1726 aaKnown RBP23.85■■□□□ 1.41
COMMD6-208ENST00000471682 TSPOAP1O95153 1857 aa23.85■■□□□ 1.41
COMMD6-208ENST00000471682 MYO5CQ9NQX4 1742 aa23.83■■□□□ 1.41
COMMD6-208ENST00000471682 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
COMMD6-208ENST00000471682 NEO1Q92859 1461 aa23.82■■□□□ 1.4
COMMD6-208ENST00000471682 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
COMMD6-208ENST00000471682 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
COMMD6-208ENST00000471682 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
COMMD6-208ENST00000471682 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
COMMD6-208ENST00000471682 EFCAB2Q5VUJ9 269 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms