RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 CSRNP3Q8WYN3 585 aa42.03■■■■■ 4.32
COL15A1-203ENST00000471477 FAM9AQ8IZU1 332 aaPredicted RBP42.02■■■■■ 4.32
COL15A1-203ENST00000471477 SHROOM2Q13796 1616 aa41.94■■■■■ 4.3
COL15A1-203ENST00000471477 KIAA0586Q9BVV6 1533 aa41.92■■■■■ 4.3
COL15A1-203ENST00000471477 JPH4Q96JJ6 628 aa41.79■■■■■ 4.28
COL15A1-203ENST00000471477 CTTNBP2Q8WZ74 1663 aa41.79■■■■■ 4.28
COL15A1-203ENST00000471477 IQGAP2Q13576 1575 aa41.79■■■■■ 4.28
COL15A1-203ENST00000471477 ERCC6L2Q5T890 1561 aa41.79■■■■■ 4.28
COL15A1-203ENST00000471477 KIF21BO75037 1637 aa41.76■■■■■ 4.28
COL15A1-203ENST00000471477 ARAP1Q96P48 1450 aa41.75■■■■■ 4.27
COL15A1-203ENST00000471477 PRG4Q92954 1404 aaPredicted RBP41.72■■■■■ 4.27
COL15A1-203ENST00000471477 CYB5RLQ6IPT4 315 aa41.61■■■■■ 4.25
COL15A1-203ENST00000471477 UGGT2Q9NYU1 1516 aa41.54■■■■■ 4.24
COL15A1-203ENST00000471477 GOLGA3Q08378 1498 aa41.49■■■■■ 4.23
COL15A1-203ENST00000471477 EHMT2Q96KQ7 1210 aa41.48■■■■■ 4.23
COL15A1-203ENST00000471477 CARMIL2Q6F5E8 1435 aa41.44■■■■■ 4.23
COL15A1-203ENST00000471477 DISP1Q96F81 1524 aa41.44■■■■■ 4.22
COL15A1-203ENST00000471477 KIAA0556O60303 1618 aa41.39■■■■■ 4.22
COL15A1-203ENST00000471477 UBTFP17480 764 aaKnown RBP41.33■■■■■ 4.21
COL15A1-203ENST00000471477 TNIKQ9UKE5 1360 aa41.3■■■■■ 4.2
COL15A1-203ENST00000471477 PTPRGP23470 1445 aa41.24■■■■■ 4.19
COL15A1-203ENST00000471477 TTBK1Q5TCY1 1321 aaPredicted RBP41.22■■■■■ 4.19
COL15A1-203ENST00000471477 SAMD9Q5K651 1589 aa41.22■■■■■ 4.19
COL15A1-203ENST00000471477 RANGAP1P46060 587 aaPredicted RBP41.18■■■■■ 4.18
COL15A1-203ENST00000471477 ADCY10Q96PN6 1610 aa41.1■■■■■ 4.17
COL15A1-203ENST00000471477 P3H3Q8IVL6 736 aa41.09■■■■■ 4.17
COL15A1-203ENST00000471477 EFCAB5A4FU69 1503 aa41.07■■■■■ 4.16
COL15A1-203ENST00000471477 UACAQ9BZF9 1416 aa40.99■■■■■ 4.15
COL15A1-203ENST00000471477 FHOD3Q2V2M9 1422 aa40.97■■■■■ 4.15
COL15A1-203ENST00000471477 ABCC2Q92887 1545 aa40.94■■■■■ 4.14
COL15A1-203ENST00000471477 UHRF1BP1LA0JNW5 1464 aa40.94■■■■■ 4.14
COL15A1-203ENST00000471477 PLB1Q6P1J6 1458 aa40.93■■■■■ 4.14
COL15A1-203ENST00000471477 ARHGAP35Q9NRY4 1499 aa40.91■■■■■ 4.14
COL15A1-203ENST00000471477 ABCA8O94911 1581 aa40.9■■■■■ 4.14
COL15A1-203ENST00000471477 LOC105371045A0A1W2PR82 267 aa40.85■■■■■ 4.13
COL15A1-203ENST00000471477 NPM1P06748 294 aaKnown RBP eCLIP40.84■■■■■ 4.13
COL15A1-203ENST00000471477 RAPGEF6Q8TEU7 1601 aa40.77■■■■■ 4.12
COL15A1-203ENST00000471477 TRHP20396 242 aaPredicted RBP40.77■■■■■ 4.12
COL15A1-203ENST00000471477 CLIP1P30622 1438 aa40.75■■■■■ 4.11
COL15A1-203ENST00000471477 MAPKBP1O60336 1514 aa40.75■■■■■ 4.11
COL15A1-203ENST00000471477 KDM5BQ9UGL1 1544 aa40.75■■■■■ 4.11
COL15A1-203ENST00000471477 ZCCHC11Q5TAX3 1644 aaKnown RBP40.74■■■■■ 4.11
COL15A1-203ENST00000471477 CEP162Q5TB80 1403 aa40.66■■■■■ 4.1
COL15A1-203ENST00000471477 FMN1Q68DA7 1419 aa40.65■■■■■ 4.1
COL15A1-203ENST00000471477 NUP153P49790 1475 aaKnown RBP40.59■■■■■ 4.09
COL15A1-203ENST00000471477 ASXL2Q76L83 1435 aa40.57■■■■■ 4.09
COL15A1-203ENST00000471477 ARID3CA6NKF2 412 aa40.56■■■■■ 4.08
COL15A1-203ENST00000471477 KIF13AQ9H1H9 1805 aa40.55■■■■■ 4.08
COL15A1-203ENST00000471477 ATP10BO94823 1461 aa40.53■■■■■ 4.08
COL15A1-203ENST00000471477 ABCC10Q5T3U5 1492 aa40.5■■■■■ 4.07
COL15A1-203ENST00000471477 DIP2BQ9P265 1576 aa40.5■■■■■ 4.07
COL15A1-203ENST00000471477 HECW1Q76N89 1606 aa40.49■■■■■ 4.07
COL15A1-203ENST00000471477 PCF11O94913 1555 aaKnown RBP40.45■■■■■ 4.07
COL15A1-203ENST00000471477 WDR7Q9Y4E6 1490 aa40.43■■■■■ 4.06
COL15A1-203ENST00000471477 ATP1B4Q9UN42 357 aaPredicted RBP40.4■■■■■ 4.06
COL15A1-203ENST00000471477 FAM69CQ0P6D2 419 aa40.38■■■■■ 4.05
COL15A1-203ENST00000471477 CDK13Q14004 1512 aaKnown RBP40.37■■■■■ 4.05
COL15A1-203ENST00000471477 CASKIN1Q8WXD9 1431 aa40.37■■■■■ 4.05
COL15A1-203ENST00000471477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.37■■■■■ 4.05
COL15A1-203ENST00000471477 HNRNPUL2Q1KMD3 747 aaKnown RBP40.37■■■■■ 4.05
COL15A1-203ENST00000471477 LRRIQ1Q96JM4 1722 aa40.37■■■■■ 4.05
COL15A1-203ENST00000471477 EPRSP07814 1512 aaKnown RBP40.34■■■■■ 4.05
COL15A1-203ENST00000471477 FYCO1Q9BQS8 1478 aa40.32■■■■■ 4.04
COL15A1-203ENST00000471477 GLI2P10070 1586 aa40.3■■■■■ 4.04
COL15A1-203ENST00000471477 KCNH8Q96L42 1107 aa40.22■■■■■ 4.03
COL15A1-203ENST00000471477 TSPOAP1O95153 1857 aa40.22■■■■■ 4.03
COL15A1-203ENST00000471477 CCDC18Q5T9S5 1454 aa40.2■■■■■ 4.03
COL15A1-203ENST00000471477 MAP3K4Q9Y6R4 1608 aa40.17■■■■■ 4.02
COL15A1-203ENST00000471477 PLEKHD1A6NEE1 506 aa40.16■■■■■ 4.02
COL15A1-203ENST00000471477 VPS8Q8N3P4 1428 aa40.14■■■■■ 4.02
COL15A1-203ENST00000471477 CFAP43Q8NDM7 1665 aa40.11■■■■■ 4.01
COL15A1-203ENST00000471477 PPRC1Q5VV67 1664 aaKnown RBP40.09■■■■■ 4.01
COL15A1-203ENST00000471477 CDK11AQ9UQ88 783 aaPredicted RBP40.07■■■■■ 4
COL15A1-203ENST00000471477 ABCA9Q8IUA7 1624 aa40.06■■■■■ 4
COL15A1-203ENST00000471477 TROQ12816 1431 aaPredicted RBP40■■■■□ 3.99
COL15A1-203ENST00000471477 CD109Q6YHK3 1445 aa40■■■■□ 3.99
COL15A1-203ENST00000471477 MAGI3Q5TCQ9 1506 aa39.99■■■■□ 3.99
COL15A1-203ENST00000471477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.96■■■■□ 3.99
COL15A1-203ENST00000471477 KIF14Q15058 1648 aa39.95■■■■□ 3.99
COL15A1-203ENST00000471477 TTC37Q6PGP7 1564 aa39.94■■■■□ 3.98
COL15A1-203ENST00000471477 TEX14Q8IWB6 1497 aa39.9■■■■□ 3.98
COL15A1-203ENST00000471477 TIAM1Q13009 1591 aa39.86■■■■□ 3.97
COL15A1-203ENST00000471477 MTUS2Q5JR59 1369 aa39.8■■■■□ 3.96
COL15A1-203ENST00000471477 EHBP1L1Q8N3D4 1523 aa39.78■■■■□ 3.96
COL15A1-203ENST00000471477 MYO5CQ9NQX4 1742 aa39.78■■■■□ 3.96
COL15A1-203ENST00000471477 KDM6BO15054 1643 aa39.77■■■■□ 3.96
COL15A1-203ENST00000471477 MAP3K1Q13233 1512 aa39.74■■■■□ 3.95
COL15A1-203ENST00000471477 PLCH2O75038 1416 aa39.68■■■■□ 3.94
COL15A1-203ENST00000471477 CFAP74Q9C0B2 1584 aa39.66■■■■□ 3.94
COL15A1-203ENST00000471477 LRRC9Q6ZRR7 1453 aa39.65■■■■□ 3.94
COL15A1-203ENST00000471477 NEO1Q92859 1461 aa39.65■■■■□ 3.94
COL15A1-203ENST00000471477 CDC42BPAQ5VT25 1732 aa39.65■■■■□ 3.94
COL15A1-203ENST00000471477 FANCAO15360 1455 aa39.65■■■■□ 3.94
COL15A1-203ENST00000471477 ARAP3Q8WWN8 1544 aa39.63■■■■□ 3.93
COL15A1-203ENST00000471477 PREX2Q70Z35 1606 aa39.63■■■■□ 3.93
COL15A1-203ENST00000471477 CDC42BPBQ9Y5S2 1711 aa39.63■■■■□ 3.93
COL15A1-203ENST00000471477 COL17A1Q9UMD9 1497 aaPredicted RBP39.62■■■■□ 3.93
COL15A1-203ENST00000471477 SUPT6HQ7KZ85 1726 aaKnown RBP39.61■■■■□ 3.93
COL15A1-203ENST00000471477 APLP2Q06481 763 aa39.61■■■■□ 3.93
COL15A1-203ENST00000471477 ARHGAP5Q13017 1502 aa39.58■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms