RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 KIAA0586Q9BVV6 1533 aa36.09■■■■□ 3.37
SREBF1-210ENST00000471445 CARMIL1Q5VZK9 1371 aa36.08■■■■□ 3.37
SREBF1-210ENST00000471445 JPH4Q96JJ6 628 aa36.08■■■■□ 3.37
SREBF1-210ENST00000471445 TRHP20396 242 aaPredicted RBP36.01■■■■□ 3.36
SREBF1-210ENST00000471445 IQGAP2Q13576 1575 aa35.87■■■■□ 3.33
SREBF1-210ENST00000471445 RAPGEF2Q9Y4G8 1499 aa35.86■■■■□ 3.33
SREBF1-210ENST00000471445 ADCY10Q96PN6 1610 aa35.76■■■■□ 3.32
SREBF1-210ENST00000471445 CTTNBP2Q8WZ74 1663 aa35.7■■■■□ 3.31
SREBF1-210ENST00000471445 CARMIL2Q6F5E8 1435 aa35.68■■■■□ 3.3
SREBF1-210ENST00000471445 KIF13AQ9H1H9 1805 aa35.67■■■■□ 3.3
SREBF1-210ENST00000471445 UGGT2Q9NYU1 1516 aa35.66■■■■□ 3.3
SREBF1-210ENST00000471445 MAPKBP1O60336 1514 aa35.64■■■■□ 3.3
SREBF1-210ENST00000471445 DISP1Q96F81 1524 aa35.64■■■■□ 3.3
SREBF1-210ENST00000471445 PRXQ9BXM0 1461 aa35.64■■■■□ 3.3
SREBF1-210ENST00000471445 TNIKQ9UKE5 1360 aa35.62■■■■□ 3.29
SREBF1-210ENST00000471445 PTPRGP23470 1445 aa35.6■■■■□ 3.29
SREBF1-210ENST00000471445 KIAA0556O60303 1618 aa35.57■■■■□ 3.29
SREBF1-210ENST00000471445 NPM1P06748 294 aaKnown RBP eCLIP35.49■■■■□ 3.27
SREBF1-210ENST00000471445 DIP2BQ9P265 1576 aa35.49■■■■□ 3.27
SREBF1-210ENST00000471445 ABCC10Q5T3U5 1492 aa35.48■■■■□ 3.27
SREBF1-210ENST00000471445 ABCC2Q92887 1545 aa35.44■■■■□ 3.26
SREBF1-210ENST00000471445 UHRF1BP1LA0JNW5 1464 aa35.44■■■■□ 3.26
SREBF1-210ENST00000471445 EEA1Q15075 1411 aa35.41■■■■□ 3.26
SREBF1-210ENST00000471445 TTBK1Q5TCY1 1321 aaPredicted RBP35.4■■■■□ 3.26
SREBF1-210ENST00000471445 UACAQ9BZF9 1416 aa35.4■■■■□ 3.26
SREBF1-210ENST00000471445 GOLGA3Q08378 1498 aa35.36■■■■□ 3.25
SREBF1-210ENST00000471445 CSRNP3Q8WYN3 585 aa35.34■■■■□ 3.25
SREBF1-210ENST00000471445 FAM69CQ0P6D2 419 aa35.3■■■■□ 3.24
SREBF1-210ENST00000471445 KDM5BQ9UGL1 1544 aa35.28■■■■□ 3.24
SREBF1-210ENST00000471445 ZCCHC11Q5TAX3 1644 aaKnown RBP35.25■■■■□ 3.23
SREBF1-210ENST00000471445 ASXL2Q76L83 1435 aa35.23■■■■□ 3.23
SREBF1-210ENST00000471445 PLB1Q6P1J6 1458 aa35.22■■■■□ 3.23
SREBF1-210ENST00000471445 ABCA8O94911 1581 aa35.2■■■■□ 3.23
SREBF1-210ENST00000471445 TSPOAP1O95153 1857 aa35.18■■■■□ 3.22
SREBF1-210ENST00000471445 KIF21BO75037 1637 aa35.17■■■■□ 3.22
SREBF1-210ENST00000471445 GLI2P10070 1586 aa35.17■■■■□ 3.22
SREBF1-210ENST00000471445 SAMD9Q5K651 1589 aa35.17■■■■□ 3.22
SREBF1-210ENST00000471445 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
SREBF1-210ENST00000471445 PPRC1Q5VV67 1664 aaKnown RBP35.08■■■■□ 3.21
SREBF1-210ENST00000471445 EPRSP07814 1512 aaKnown RBP35.06■■■■□ 3.2
SREBF1-210ENST00000471445 AEBP2Q6ZN18 517 aaPredicted RBP35.05■■■■□ 3.2
SREBF1-210ENST00000471445 FAM9AQ8IZU1 332 aaPredicted RBP35.04■■■■□ 3.2
SREBF1-210ENST00000471445 KDM6BO15054 1643 aa35.03■■■■□ 3.2
SREBF1-210ENST00000471445 MAP3K4Q9Y6R4 1608 aa35.02■■■■□ 3.2
SREBF1-210ENST00000471445 WDR7Q9Y4E6 1490 aa35.01■■■■□ 3.19
SREBF1-210ENST00000471445 P3H3Q8IVL6 736 aa34.92■■■■□ 3.18
SREBF1-210ENST00000471445 RAPGEF6Q8TEU7 1601 aa34.92■■■■□ 3.18
SREBF1-210ENST00000471445 EFCAB5A4FU69 1503 aa34.89■■■■□ 3.18
SREBF1-210ENST00000471445 CFAP43Q8NDM7 1665 aa34.85■■■■□ 3.17
SREBF1-210ENST00000471445 FHOD3Q2V2M9 1422 aa34.84■■■■□ 3.17
SREBF1-210ENST00000471445 ATP10BO94823 1461 aa34.82■■■■□ 3.16
SREBF1-210ENST00000471445 TEX14Q8IWB6 1497 aa34.81■■■■□ 3.16
SREBF1-210ENST00000471445 NUP153P49790 1475 aaKnown RBP34.74■■■■□ 3.15
SREBF1-210ENST00000471445 RANGAP1P46060 587 aaPredicted RBP34.74■■■■□ 3.15
SREBF1-210ENST00000471445 MAGI3Q5TCQ9 1506 aa34.71■■■■□ 3.15
SREBF1-210ENST00000471445 ARID3CA6NKF2 412 aa34.69■■■■□ 3.14
SREBF1-210ENST00000471445 COL17A1Q9UMD9 1497 aaPredicted RBP34.67■■■■□ 3.14
SREBF1-210ENST00000471445 CD109Q6YHK3 1445 aa34.67■■■■□ 3.14
SREBF1-210ENST00000471445 ABCA9Q8IUA7 1624 aa34.65■■■■□ 3.14
SREBF1-210ENST00000471445 UBTFP17480 764 aaKnown RBP34.63■■■■□ 3.13
SREBF1-210ENST00000471445 KCNH8Q96L42 1107 aa34.63■■■■□ 3.13
SREBF1-210ENST00000471445 EHMT2Q96KQ7 1210 aa34.6■■■■□ 3.13
SREBF1-210ENST00000471445 ARHGAP35Q9NRY4 1499 aa34.59■■■■□ 3.13
SREBF1-210ENST00000471445 FMN1Q68DA7 1419 aa34.49■■■■□ 3.11
SREBF1-210ENST00000471445 HECW1Q76N89 1606 aa34.48■■■■□ 3.11
SREBF1-210ENST00000471445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.48■■■■□ 3.11
SREBF1-210ENST00000471445 HNRNPUL2Q1KMD3 747 aaKnown RBP34.48■■■■□ 3.11
SREBF1-210ENST00000471445 CDK13Q14004 1512 aaKnown RBP34.45■■■■□ 3.1
SREBF1-210ENST00000471445 ARAP3Q8WWN8 1544 aa34.41■■■■□ 3.1
SREBF1-210ENST00000471445 NEO1Q92859 1461 aa34.36■■■■□ 3.09
SREBF1-210ENST00000471445 PLEKHD1A6NEE1 506 aa34.36■■■■□ 3.09
SREBF1-210ENST00000471445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.35■■■■□ 3.09
SREBF1-210ENST00000471445 TTC37Q6PGP7 1564 aa34.34■■■■□ 3.09
SREBF1-210ENST00000471445 PHLDB1Q86UU1 1377 aa34.34■■■■□ 3.09
SREBF1-210ENST00000471445 LRRIQ1Q96JM4 1722 aa34.33■■■■□ 3.09
SREBF1-210ENST00000471445 KDM4FA0A1W2PPD8 638 aa34.33■■■■□ 3.09
SREBF1-210ENST00000471445 ADGRL1O94910 1474 aa34.27■■■■□ 3.08
SREBF1-210ENST00000471445 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
SREBF1-210ENST00000471445 CFAP74Q9C0B2 1584 aa34.27■■■■□ 3.08
SREBF1-210ENST00000471445 FRMPD1Q5SYB0 1578 aa34.24■■■■□ 3.07
SREBF1-210ENST00000471445 CASKIN1Q8WXD9 1431 aa34.18■■■■□ 3.06
SREBF1-210ENST00000471445 FANCAO15360 1455 aa34.18■■■■□ 3.06
SREBF1-210ENST00000471445 ATP1B4Q9UN42 357 aaPredicted RBP34.17■■■■□ 3.06
SREBF1-210ENST00000471445 RICTORQ6R327 1708 aa34.16■■■■□ 3.06
SREBF1-210ENST00000471445 KIF14Q15058 1648 aa34.16■■■■□ 3.06
SREBF1-210ENST00000471445 CLIP1P30622 1438 aa34.16■■■■□ 3.06
SREBF1-210ENST00000471445 MYO5CQ9NQX4 1742 aa34.16■■■■□ 3.06
SREBF1-210ENST00000471445 TROQ12816 1431 aaPredicted RBP34.13■■■■□ 3.05
SREBF1-210ENST00000471445 CCDC18Q5T9S5 1454 aa34.13■■■■□ 3.05
SREBF1-210ENST00000471445 AKNAQ7Z591 1439 aa34.12■■■■□ 3.05
SREBF1-210ENST00000471445 FYCO1Q9BQS8 1478 aa34.11■■■■□ 3.05
SREBF1-210ENST00000471445 CDK11AQ9UQ88 783 aaPredicted RBP34.1■■■■□ 3.05
SREBF1-210ENST00000471445 PLCH2O75038 1416 aa34.08■■■■□ 3.05
SREBF1-210ENST00000471445 RAPGEF3O95398 923 aa34.08■■■■□ 3.05
SREBF1-210ENST00000471445 DENND4BO75064 1496 aaPredicted RBP34.07■■■■□ 3.05
SREBF1-210ENST00000471445 ARHGEF40Q8TER5 1519 aa34.04■■■■□ 3.04
SREBF1-210ENST00000471445 ZMYM4Q5VZL5 1548 aa34.03■■■■□ 3.04
SREBF1-210ENST00000471445 CDC42BPBQ9Y5S2 1711 aa33.94■■■■□ 3.02
SREBF1-210ENST00000471445 PREX2Q70Z35 1606 aa33.93■■■■□ 3.02
SREBF1-210ENST00000471445 POGZQ7Z3K3 1410 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms