RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 TNIKQ9UKE5 1360 aa18.92■□□□□ 0.62
FN1-217ENST00000471193 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
FN1-217ENST00000471193 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
FN1-217ENST00000471193 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
FN1-217ENST00000471193 IQGAP2Q13576 1575 aa18.89■□□□□ 0.61
FN1-217ENST00000471193 SHROOM2Q13796 1616 aa18.8■□□□□ 0.6
FN1-217ENST00000471193 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
FN1-217ENST00000471193 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
FN1-217ENST00000471193 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
FN1-217ENST00000471193 EFCAB5A4FU69 1503 aa18.76■□□□□ 0.59
FN1-217ENST00000471193 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
FN1-217ENST00000471193 CLIP1P30622 1438 aa18.74■□□□□ 0.59
FN1-217ENST00000471193 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
FN1-217ENST00000471193 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
FN1-217ENST00000471193 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
FN1-217ENST00000471193 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
FN1-217ENST00000471193 PRG4Q92954 1404 aaPredicted RBP18.66■□□□□ 0.58
FN1-217ENST00000471193 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
FN1-217ENST00000471193 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
FN1-217ENST00000471193 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
FN1-217ENST00000471193 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.58
FN1-217ENST00000471193 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
FN1-217ENST00000471193 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
FN1-217ENST00000471193 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
FN1-217ENST00000471193 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
FN1-217ENST00000471193 VPS8Q8N3P4 1428 aa18.53■□□□□ 0.56
FN1-217ENST00000471193 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.55
FN1-217ENST00000471193 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.55
FN1-217ENST00000471193 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.55
FN1-217ENST00000471193 PCF11O94913 1555 aaKnown RBP18.51■□□□□ 0.55
FN1-217ENST00000471193 PTPRGP23470 1445 aa18.49■□□□□ 0.55
FN1-217ENST00000471193 ABCA8O94911 1581 aa18.47■□□□□ 0.55
FN1-217ENST00000471193 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
FN1-217ENST00000471193 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
FN1-217ENST00000471193 CASKIN1Q8WXD9 1431 aa18.45■□□□□ 0.54
FN1-217ENST00000471193 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
FN1-217ENST00000471193 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
FN1-217ENST00000471193 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
FN1-217ENST00000471193 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
FN1-217ENST00000471193 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
FN1-217ENST00000471193 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.54
FN1-217ENST00000471193 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.54
FN1-217ENST00000471193 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
FN1-217ENST00000471193 LRRIQ1Q96JM4 1722 aa18.37■□□□□ 0.53
FN1-217ENST00000471193 CFAP43Q8NDM7 1665 aa18.35■□□□□ 0.53
FN1-217ENST00000471193 CCDC18Q5T9S5 1454 aa18.34■□□□□ 0.53
FN1-217ENST00000471193 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.53
FN1-217ENST00000471193 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
FN1-217ENST00000471193 TIAM1Q13009 1591 aa18.32■□□□□ 0.52
FN1-217ENST00000471193 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
FN1-217ENST00000471193 CDK13Q14004 1512 aaKnown RBP18.31■□□□□ 0.52
FN1-217ENST00000471193 KDM5BQ9UGL1 1544 aa18.3■□□□□ 0.52
FN1-217ENST00000471193 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
FN1-217ENST00000471193 ATP10BO94823 1461 aa18.27■□□□□ 0.52
FN1-217ENST00000471193 ATP1B4Q9UN42 357 aaPredicted RBP18.27■□□□□ 0.52
FN1-217ENST00000471193 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
FN1-217ENST00000471193 ARID3CA6NKF2 412 aa18.22■□□□□ 0.51
FN1-217ENST00000471193 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
FN1-217ENST00000471193 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
FN1-217ENST00000471193 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
FN1-217ENST00000471193 APLP2Q06481 763 aa18.2■□□□□ 0.5
FN1-217ENST00000471193 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
FN1-217ENST00000471193 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
FN1-217ENST00000471193 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
FN1-217ENST00000471193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
FN1-217ENST00000471193 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
FN1-217ENST00000471193 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
FN1-217ENST00000471193 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
FN1-217ENST00000471193 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
FN1-217ENST00000471193 NPM1P06748 294 aaKnown RBP eCLIP18.12■□□□□ 0.49
FN1-217ENST00000471193 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
FN1-217ENST00000471193 KIF14Q15058 1648 aa18.12■□□□□ 0.49
FN1-217ENST00000471193 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
FN1-217ENST00000471193 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
FN1-217ENST00000471193 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
FN1-217ENST00000471193 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
FN1-217ENST00000471193 ABCC10Q5T3U5 1492 aa18.05■□□□□ 0.48
FN1-217ENST00000471193 TTC37Q6PGP7 1564 aa18.04■□□□□ 0.48
FN1-217ENST00000471193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
FN1-217ENST00000471193 ABCA9Q8IUA7 1624 aa18.01■□□□□ 0.47
FN1-217ENST00000471193 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
FN1-217ENST00000471193 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
FN1-217ENST00000471193 GLI2P10070 1586 aa17.99■□□□□ 0.47
FN1-217ENST00000471193 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
FN1-217ENST00000471193 PREX2Q70Z35 1606 aa17.97■□□□□ 0.47
FN1-217ENST00000471193 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
FN1-217ENST00000471193 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
FN1-217ENST00000471193 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
FN1-217ENST00000471193 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
FN1-217ENST00000471193 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
FN1-217ENST00000471193 KCNH8Q96L42 1107 aa17.95■□□□□ 0.46
FN1-217ENST00000471193 MAP3K4Q9Y6R4 1608 aa17.94■□□□□ 0.46
FN1-217ENST00000471193 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
FN1-217ENST00000471193 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
FN1-217ENST00000471193 KIF13AQ9H1H9 1805 aa17.92■□□□□ 0.46
FN1-217ENST00000471193 CDC42BPBQ9Y5S2 1711 aa17.91■□□□□ 0.46
FN1-217ENST00000471193 MIA2Q96PC5 1412 aa17.9■□□□□ 0.46
FN1-217ENST00000471193 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
FN1-217ENST00000471193 PLCH2O75038 1416 aa17.89■□□□□ 0.46
FN1-217ENST00000471193 TCOF1Q13428 1488 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms