RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	PHF23	Q9BUL5	403 aa	Predicted RBP	13.95	□□□□□ -0.18
HDLBP-233	ENST00000470710	CLIP1	P30622	1438 aa		13.92	□□□□□ -0.18
HDLBP-233	ENST00000470710	NUP160	Q12769	1436 aa		13.9	□□□□□ -0.18
HDLBP-233	ENST00000470710	FBLN2	P98095	1184 aa		13.89	□□□□□ -0.19
HDLBP-233	ENST00000470710	KIAA0586	Q9BVV6	1533 aa		13.88	□□□□□ -0.19
HDLBP-233	ENST00000470710	CTTNBP2	Q8WZ74	1663 aa		13.86	□□□□□ -0.19
HDLBP-233	ENST00000470710	IQGAP2	Q13576	1575 aa		13.84	□□□□□ -0.19
HDLBP-233	ENST00000470710	CEP170	Q5SW79	1584 aa		13.84	□□□□□ -0.19
HDLBP-233	ENST00000470710	ARHGAP35	Q9NRY4	1499 aa		13.83	□□□□□ -0.2
HDLBP-233	ENST00000470710	EFCAB5	A4FU69	1503 aa		13.83	□□□□□ -0.2
HDLBP-233	ENST00000470710	RANGAP1	P46060	587 aa	Predicted RBP	13.82	□□□□□ -0.2
HDLBP-233	ENST00000470710	UGGT2	Q9NYU1	1516 aa		13.81	□□□□□ -0.2
HDLBP-233	ENST00000470710	CHD1	O14646	1710 aa		13.8	□□□□□ -0.2
HDLBP-233	ENST00000470710	ARAP1	Q96P48	1450 aa		13.8	□□□□□ -0.2
HDLBP-233	ENST00000470710	VPS8	Q8N3P4	1428 aa		13.78	□□□□□ -0.2
HDLBP-233	ENST00000470710	SAMD9	Q5K651	1589 aa		13.78	□□□□□ -0.2
HDLBP-233	ENST00000470710	JPH4	Q96JJ6	628 aa		13.76	□□□□□ -0.21
HDLBP-233	ENST00000470710	CLASP1	Q7Z460	1538 aa		13.74	□□□□□ -0.21
HDLBP-233	ENST00000470710	FHOD3	Q2V2M9	1422 aa		13.73	□□□□□ -0.21
HDLBP-233	ENST00000470710	DISP1	Q96F81	1524 aa		13.73	□□□□□ -0.21
HDLBP-233	ENST00000470710	CARMIL2	Q6F5E8	1435 aa		13.72	□□□□□ -0.21
HDLBP-233	ENST00000470710	P3H3	Q8IVL6	736 aa		13.71	□□□□□ -0.21
HDLBP-233	ENST00000470710	FMN1	Q68DA7	1419 aa		13.71	□□□□□ -0.22
HDLBP-233	ENST00000470710	OSCAR	Q8IYS5	282 aa		13.7	□□□□□ -0.22
HDLBP-233	ENST00000470710	KIAA0556	O60303	1618 aa		13.7	□□□□□ -0.22
HDLBP-233	ENST00000470710	SHROOM2	Q13796	1616 aa		13.69	□□□□□ -0.22
HDLBP-233	ENST00000470710	PRG4	Q92954	1404 aa	Predicted RBP	13.68	□□□□□ -0.22
HDLBP-233	ENST00000470710	CASKIN1	Q8WXD9	1431 aa		13.65	□□□□□ -0.22
HDLBP-233	ENST00000470710	FYCO1	Q9BQS8	1478 aa		13.64	□□□□□ -0.23
HDLBP-233	ENST00000470710	APLP2	Q06481	763 aa		13.61	□□□□□ -0.23
HDLBP-233	ENST00000470710	PCF11	O94913	1555 aa	Known RBP	13.61	□□□□□ -0.23
HDLBP-233	ENST00000470710	MAP3K1	Q13233	1512 aa		13.59	□□□□□ -0.23
HDLBP-233	ENST00000470710	PTPRG	P23470	1445 aa		13.59	□□□□□ -0.23
HDLBP-233	ENST00000470710	ERCC6L2	Q5T890	1561 aa		13.57	□□□□□ -0.24
HDLBP-233	ENST00000470710	HECW1	Q76N89	1606 aa		13.54	□□□□□ -0.24
HDLBP-233	ENST00000470710	CCDC18	Q5T9S5	1454 aa		13.54	□□□□□ -0.24
HDLBP-233	ENST00000470710	PLB1	Q6P1J6	1458 aa		13.54	□□□□□ -0.24
HDLBP-233	ENST00000470710	ABCA8	O94911	1581 aa		13.54	□□□□□ -0.24
HDLBP-233	ENST00000470710	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-233	ENST00000470710	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.53	□□□□□ -0.24
HDLBP-233	ENST00000470710	NUP153	P49790	1475 aa	Known RBP	13.53	□□□□□ -0.24
HDLBP-233	ENST00000470710	TIAM1	Q13009	1591 aa		13.53	□□□□□ -0.24
HDLBP-233	ENST00000470710	RAPGEF6	Q8TEU7	1601 aa		13.53	□□□□□ -0.24
HDLBP-233	ENST00000470710	EPRS	P07814	1512 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-233	ENST00000470710	UACA	Q9BZF9	1416 aa		13.51	□□□□□ -0.25
HDLBP-233	ENST00000470710	KANK4	Q5T7N3	995 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-233	ENST00000470710	CFAP43	Q8NDM7	1665 aa		13.5	□□□□□ -0.25
HDLBP-233	ENST00000470710	LRRC9	Q6ZRR7	1453 aa		13.49	□□□□□ -0.25
HDLBP-233	ENST00000470710	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-233	ENST00000470710	UHRF1BP1L	A0JNW5	1464 aa		13.48	□□□□□ -0.25
HDLBP-233	ENST00000470710	ABCC2	Q92887	1545 aa		13.47	□□□□□ -0.25
HDLBP-233	ENST00000470710	ARHGEF11	O15085	1522 aa		13.45	□□□□□ -0.26
HDLBP-233	ENST00000470710	CDK13	Q14004	1512 aa	Known RBP	13.45	□□□□□ -0.26
HDLBP-233	ENST00000470710	MTUS2	Q5JR59	1369 aa		13.45	□□□□□ -0.26
HDLBP-233	ENST00000470710	ATP10B	O94823	1461 aa		13.44	□□□□□ -0.26
HDLBP-233	ENST00000470710	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.44	□□□□□ -0.26
HDLBP-233	ENST00000470710	LRRIQ1	Q96JM4	1722 aa		13.44	□□□□□ -0.26
HDLBP-233	ENST00000470710	TRIM26	Q12899	539 aa	Predicted RBP	13.43	□□□□□ -0.26
HDLBP-233	ENST00000470710	EHBP1L1	Q8N3D4	1523 aa		13.43	□□□□□ -0.26
HDLBP-233	ENST00000470710	ARID3C	A6NKF2	412 aa		13.42	□□□□□ -0.26
HDLBP-233	ENST00000470710	MAGI3	Q5TCQ9	1506 aa		13.4	□□□□□ -0.26
HDLBP-233	ENST00000470710	KDM5B	Q9UGL1	1544 aa		13.4	□□□□□ -0.26
HDLBP-233	ENST00000470710	TRO	Q12816	1431 aa	Predicted RBP	13.39	□□□□□ -0.27
HDLBP-233	ENST00000470710	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.39	□□□□□ -0.27
HDLBP-233	ENST00000470710	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.39	□□□□□ -0.27
HDLBP-233	ENST00000470710	PLEKHD1	A6NEE1	506 aa		13.37	□□□□□ -0.27
HDLBP-233	ENST00000470710	RIMBP3C	A6NJZ7	1639 aa		13.37	□□□□□ -0.27
HDLBP-233	ENST00000470710	RIMBP3B	A6NNM3	1639 aa		13.37	□□□□□ -0.27
HDLBP-233	ENST00000470710	ADCY10	Q96PN6	1610 aa		13.37	□□□□□ -0.27
HDLBP-233	ENST00000470710	RIMBP3	Q9UFD9	1639 aa		13.37	□□□□□ -0.27
HDLBP-233	ENST00000470710	NCOA2	Q15596	1464 aa		13.36	□□□□□ -0.27
HDLBP-233	ENST00000470710	PHLDB1	Q86UU1	1377 aa		13.35	□□□□□ -0.27
HDLBP-233	ENST00000470710	RRBP1	Q9P2E9	1410 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-233	ENST00000470710	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.33	□□□□□ -0.27
HDLBP-233	ENST00000470710	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.32	□□□□□ -0.28
HDLBP-233	ENST00000470710	CYB5RL	Q6IPT4	315 aa		13.31	□□□□□ -0.28
HDLBP-233	ENST00000470710	PCGF6	Q9BYE7	350 aa		13.31	□□□□□ -0.28
HDLBP-233	ENST00000470710	CCNB3	Q8WWL7	1395 aa		13.31	□□□□□ -0.28
HDLBP-233	ENST00000470710	MYOM3	Q5VTT5	1437 aa		13.3	□□□□□ -0.28
HDLBP-233	ENST00000470710	NPM1	P06748	294 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
HDLBP-233	ENST00000470710	FGD6	Q6ZV73	1430 aa		13.29	□□□□□ -0.28
HDLBP-233	ENST00000470710	ABCC10	Q5T3U5	1492 aa		13.29	□□□□□ -0.28
HDLBP-233	ENST00000470710	KIF14	Q15058	1648 aa		13.28	□□□□□ -0.28
HDLBP-233	ENST00000470710	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
HDLBP-233	ENST00000470710	WDR7	Q9Y4E6	1490 aa		13.28	□□□□□ -0.28
HDLBP-233	ENST00000470710	MIA2	Q96PC5	1412 aa		13.27	□□□□□ -0.29
HDLBP-233	ENST00000470710	ASXL2	Q76L83	1435 aa		13.26	□□□□□ -0.29
HDLBP-233	ENST00000470710	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-233	ENST00000470710	MAPKBP1	O60336	1514 aa		13.23	□□□□□ -0.29
HDLBP-233	ENST00000470710	TCOF1	Q13428	1488 aa	Known RBP	13.23	□□□□□ -0.29
HDLBP-233	ENST00000470710	KCNH8	Q96L42	1107 aa		13.21	□□□□□ -0.29
HDLBP-233	ENST00000470710	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
HDLBP-233	ENST00000470710	FAM50A	Q14320	339 aa	Known RBP	13.2	□□□□□ -0.3
HDLBP-233	ENST00000470710	FOXD1	Q16676	465 aa		13.2	□□□□□ -0.3
HDLBP-233	ENST00000470710	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.2	□□□□□ -0.3
HDLBP-233	ENST00000470710	DNAJC5	Q9H3Z4	198 aa		13.19	□□□□□ -0.3
HDLBP-233	ENST00000470710	PTPN23	Q9H3S7	1636 aa		13.19	□□□□□ -0.3
HDLBP-233	ENST00000470710	TTC37	Q6PGP7	1564 aa		13.19	□□□□□ -0.3
HDLBP-233	ENST00000470710	ITSN2	Q9NZM3	1697 aa		13.18	□□□□□ -0.3
HDLBP-233	ENST00000470710	PLCH2	O75038	1416 aa		13.17	□□□□□ -0.3

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