RNA–Protein interactions for RNA: ENST00000470306.5

SEMA4A-212, Transcript of semaphorin 4A, humanhuman

TSL 2

Gene SEMA4A, Length 2,405 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-212ENST00000470306 HOMEZQ8IX15 550 aa16.21■□□□□ 0.19
SEMA4A-212ENST00000470306 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
SEMA4A-212ENST00000470306 FANCIQ9NVI1 1328 aa16.19■□□□□ 0.18
SEMA4A-212ENST00000470306 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
SEMA4A-212ENST00000470306 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
SEMA4A-212ENST00000470306 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
SEMA4A-212ENST00000470306 CEP162Q5TB80 1403 aa16.12■□□□□ 0.17
SEMA4A-212ENST00000470306 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
SEMA4A-212ENST00000470306 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SEMA4A-212ENST00000470306 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
SEMA4A-212ENST00000470306 UBTFP17480 764 aaKnown RBP16.08■□□□□ 0.17
SEMA4A-212ENST00000470306 BIVM-ERCC5R4GMW8 1640 aa16.07■□□□□ 0.16
SEMA4A-212ENST00000470306 KIF21BO75037 1637 aa16.06■□□□□ 0.16
SEMA4A-212ENST00000470306 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
SEMA4A-212ENST00000470306 CFTRP13569 1480 aa16.04■□□□□ 0.16
SEMA4A-212ENST00000470306 BRD2P25440 801 aaKnown RBP16■□□□□ 0.15
SEMA4A-212ENST00000470306 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
SEMA4A-212ENST00000470306 RSPH4AQ5TD94 716 aa15.99■□□□□ 0.15
SEMA4A-212ENST00000470306 MIER1Q8N108 512 aa15.99■□□□□ 0.15
SEMA4A-212ENST00000470306 CUX1P39880 1505 aa15.98■□□□□ 0.15
SEMA4A-212ENST00000470306 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
SEMA4A-212ENST00000470306 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
SEMA4A-212ENST00000470306 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
SEMA4A-212ENST00000470306 DHX37Q8IY37 1157 aaKnown RBP15.95■□□□□ 0.14
SEMA4A-212ENST00000470306 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
SEMA4A-212ENST00000470306 RAPGEF2Q9Y4G8 1499 aa15.93■□□□□ 0.14
SEMA4A-212ENST00000470306 PAXIP1Q6ZW49 1069 aaPredicted RBP15.93■□□□□ 0.14
SEMA4A-212ENST00000470306 C11orf95C9JLR9 678 aaPredicted RBP15.9■□□□□ 0.14
SEMA4A-212ENST00000470306 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
SEMA4A-212ENST00000470306 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
SEMA4A-212ENST00000470306 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
SEMA4A-212ENST00000470306 CLIP1P30622 1438 aa15.89■□□□□ 0.13
SEMA4A-212ENST00000470306 PRXQ9BXM0 1461 aa15.85■□□□□ 0.13
SEMA4A-212ENST00000470306 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
SEMA4A-212ENST00000470306 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
SEMA4A-212ENST00000470306 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
SEMA4A-212ENST00000470306 NAP1L5Q96NT1 182 aaPredicted RBP15.83■□□□□ 0.12
SEMA4A-212ENST00000470306 NAP1L2Q9ULW6 460 aaPredicted RBP15.8■□□□□ 0.12
SEMA4A-212ENST00000470306 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
SEMA4A-212ENST00000470306 NBR1Q14596 966 aa15.75■□□□□ 0.11
SEMA4A-212ENST00000470306 RTL5Q5HYW3 569 aaPredicted RBP15.75■□□□□ 0.11
SEMA4A-212ENST00000470306 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
SEMA4A-212ENST00000470306 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
SEMA4A-212ENST00000470306 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
SEMA4A-212ENST00000470306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.73■□□□□ 0.11
SEMA4A-212ENST00000470306 CUX2O14529 1486 aa15.73■□□□□ 0.11
SEMA4A-212ENST00000470306 BCANQ96GW7 911 aa15.72■□□□□ 0.11
SEMA4A-212ENST00000470306 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
SEMA4A-212ENST00000470306 RRP9O43818 475 aaKnown RBP15.7■□□□□ 0.1
SEMA4A-212ENST00000470306 IGF1RP08069 1367 aa15.68■□□□□ 0.1
SEMA4A-212ENST00000470306 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
SEMA4A-212ENST00000470306 AMER1Q5JTC6 1135 aaPredicted RBP15.68■□□□□ 0.1
SEMA4A-212ENST00000470306 NESP48681 1621 aa15.68■□□□□ 0.1
SEMA4A-212ENST00000470306 NOP58Q9Y2X3 529 aaKnown RBP15.67■□□□□ 0.1
SEMA4A-212ENST00000470306 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
SEMA4A-212ENST00000470306 IPO4Q8TEX9 1081 aaKnown RBP15.67■□□□□ 0.1
SEMA4A-212ENST00000470306 HSP90AA2PQ14568 343 aaPredicted RBP15.66■□□□□ 0.1
SEMA4A-212ENST00000470306 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
SEMA4A-212ENST00000470306 FKBP8Q14318 412 aa15.65■□□□□ 0.1
SEMA4A-212ENST00000470306 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
SEMA4A-212ENST00000470306 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
SEMA4A-212ENST00000470306 WASHC2AQ641Q2 1341 aa15.64■□□□□ 0.09
SEMA4A-212ENST00000470306 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
SEMA4A-212ENST00000470306 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
SEMA4A-212ENST00000470306 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
SEMA4A-212ENST00000470306 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEMA4A-212ENST00000470306 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
SEMA4A-212ENST00000470306 PRDM4Q9UKN5 801 aa15.59■□□□□ 0.09
SEMA4A-212ENST00000470306 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.09
SEMA4A-212ENST00000470306 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
SEMA4A-212ENST00000470306 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
SEMA4A-212ENST00000470306 RAD54L2Q9Y4B4 1467 aa15.58■□□□□ 0.08
SEMA4A-212ENST00000470306 FAM43AQ8N2R8 423 aa15.57■□□□□ 0.08
SEMA4A-212ENST00000470306 CDK11AQ9UQ88 783 aaPredicted RBP15.57■□□□□ 0.08
SEMA4A-212ENST00000470306 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SEMA4A-212ENST00000470306 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
SEMA4A-212ENST00000470306 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
SEMA4A-212ENST00000470306 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
SEMA4A-212ENST00000470306 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
SEMA4A-212ENST00000470306 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
SEMA4A-212ENST00000470306 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
SEMA4A-212ENST00000470306 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
SEMA4A-212ENST00000470306 CALD1Q05682 793 aaKnown RBP15.53■□□□□ 0.08
SEMA4A-212ENST00000470306 HSP90B1P14625 803 aaKnown RBP15.51■□□□□ 0.07
SEMA4A-212ENST00000470306 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
SEMA4A-212ENST00000470306 CHRM1P11229 460 aaPredicted RBP15.51■□□□□ 0.07
SEMA4A-212ENST00000470306 ITGAEP38570 1179 aa15.5■□□□□ 0.07
SEMA4A-212ENST00000470306 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
SEMA4A-212ENST00000470306 TEX2Q8IWB9 1127 aa15.5■□□□□ 0.07
SEMA4A-212ENST00000470306 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
SEMA4A-212ENST00000470306 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
SEMA4A-212ENST00000470306 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
SEMA4A-212ENST00000470306 USP35Q9P2H5 1018 aa15.48■□□□□ 0.07
SEMA4A-212ENST00000470306 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
SEMA4A-212ENST00000470306 CUL7Q14999 1698 aa15.47■□□□□ 0.07
SEMA4A-212ENST00000470306 CDK11BP21127 795 aaKnown RBP15.47■□□□□ 0.07
SEMA4A-212ENST00000470306 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
SEMA4A-212ENST00000470306 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
SEMA4A-212ENST00000470306 HSP90AA1P07900 732 aaKnown RBP15.44■□□□□ 0.06
SEMA4A-212ENST00000470306 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms