RNA–Protein interactions for RNA: ENST00000470306.5

SEMA4A-212, Transcript of semaphorin 4A, humanhuman

TSL 2

Gene SEMA4A, Length 2,405 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-212ENST00000470306 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
SEMA4A-212ENST00000470306 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
SEMA4A-212ENST00000470306 MYT1Q01538 1121 aa20.77■□□□□ 0.92
SEMA4A-212ENST00000470306 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
SEMA4A-212ENST00000470306 PRKCSHP14314 528 aaPredicted RBP19.52■□□□□ 0.72
SEMA4A-212ENST00000470306 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
SEMA4A-212ENST00000470306 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
SEMA4A-212ENST00000470306 APLP2Q06481 763 aa19.2■□□□□ 0.66
SEMA4A-212ENST00000470306 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
SEMA4A-212ENST00000470306 HRCP23327 699 aa18.96■□□□□ 0.63
SEMA4A-212ENST00000470306 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
SEMA4A-212ENST00000470306 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SEMA4A-212ENST00000470306 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
SEMA4A-212ENST00000470306 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
SEMA4A-212ENST00000470306 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
SEMA4A-212ENST00000470306 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
SEMA4A-212ENST00000470306 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
SEMA4A-212ENST00000470306 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
SEMA4A-212ENST00000470306 CENPBP07199 599 aaPredicted RBP18.22■□□□□ 0.51
SEMA4A-212ENST00000470306 DCAF1Q9Y4B6 1507 aa18.2■□□□□ 0.5
SEMA4A-212ENST00000470306 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
SEMA4A-212ENST00000470306 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.47
SEMA4A-212ENST00000470306 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
SEMA4A-212ENST00000470306 ANP32EQ9BTT0 268 aa17.82■□□□□ 0.44
SEMA4A-212ENST00000470306 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
SEMA4A-212ENST00000470306 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
SEMA4A-212ENST00000470306 ABCC9O60706 1549 aa17.68■□□□□ 0.42
SEMA4A-212ENST00000470306 SCRIBQ14160 1630 aa17.64■□□□□ 0.42
SEMA4A-212ENST00000470306 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
SEMA4A-212ENST00000470306 UBE2Q2Q8WVN8 375 aa17.63■□□□□ 0.41
SEMA4A-212ENST00000470306 NACADO15069 1562 aa17.6■□□□□ 0.41
SEMA4A-212ENST00000470306 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
SEMA4A-212ENST00000470306 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
SEMA4A-212ENST00000470306 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
SEMA4A-212ENST00000470306 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
SEMA4A-212ENST00000470306 ANO8Q9HCE9 1232 aaPredicted RBP17.45■□□□□ 0.38
SEMA4A-212ENST00000470306 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
SEMA4A-212ENST00000470306 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
SEMA4A-212ENST00000470306 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
SEMA4A-212ENST00000470306 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
SEMA4A-212ENST00000470306 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
SEMA4A-212ENST00000470306 PKNOX2Q96KN3 472 aa17.19■□□□□ 0.34
SEMA4A-212ENST00000470306 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
SEMA4A-212ENST00000470306 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
SEMA4A-212ENST00000470306 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.33
SEMA4A-212ENST00000470306 WIZO95785 1651 aa17.03■□□□□ 0.32
SEMA4A-212ENST00000470306 BAZ1AQ9NRL2 1556 aaPredicted RBP17.01■□□□□ 0.31
SEMA4A-212ENST00000470306 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
SEMA4A-212ENST00000470306 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
SEMA4A-212ENST00000470306 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
SEMA4A-212ENST00000470306 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
SEMA4A-212ENST00000470306 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
SEMA4A-212ENST00000470306 CCDC136Q96JN2 1154 aa16.87■□□□□ 0.29
SEMA4A-212ENST00000470306 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
SEMA4A-212ENST00000470306 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
SEMA4A-212ENST00000470306 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
SEMA4A-212ENST00000470306 ARXQ96QS3 562 aa16.85■□□□□ 0.29
SEMA4A-212ENST00000470306 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
SEMA4A-212ENST00000470306 NEFLP07196 543 aa16.81■□□□□ 0.28
SEMA4A-212ENST00000470306 PABPN1Q86U42 306 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEMA4A-212ENST00000470306 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
SEMA4A-212ENST00000470306 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
SEMA4A-212ENST00000470306 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
SEMA4A-212ENST00000470306 PDIA4P13667 645 aaKnown RBP16.72■□□□□ 0.27
SEMA4A-212ENST00000470306 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
SEMA4A-212ENST00000470306 PDE4CQ08493 712 aa16.7■□□□□ 0.26
SEMA4A-212ENST00000470306 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
SEMA4A-212ENST00000470306 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
SEMA4A-212ENST00000470306 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
SEMA4A-212ENST00000470306 PEG3Q9GZU2 1588 aa16.62■□□□□ 0.25
SEMA4A-212ENST00000470306 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
SEMA4A-212ENST00000470306 DEKP35659 375 aaKnown RBP16.57■□□□□ 0.24
SEMA4A-212ENST00000470306 FGD1P98174 961 aa16.55■□□□□ 0.24
SEMA4A-212ENST00000470306 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
SEMA4A-212ENST00000470306 ABCC8Q09428 1581 aa16.52■□□□□ 0.23
SEMA4A-212ENST00000470306 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
SEMA4A-212ENST00000470306 ATAD2BQ9ULI0 1458 aa16.51■□□□□ 0.23
SEMA4A-212ENST00000470306 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
SEMA4A-212ENST00000470306 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
SEMA4A-212ENST00000470306 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
SEMA4A-212ENST00000470306 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
SEMA4A-212ENST00000470306 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
SEMA4A-212ENST00000470306 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
SEMA4A-212ENST00000470306 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
SEMA4A-212ENST00000470306 AAMPQ13685 434 aa16.37■□□□□ 0.21
SEMA4A-212ENST00000470306 MSH5O43196 834 aa16.35■□□□□ 0.21
SEMA4A-212ENST00000470306 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
SEMA4A-212ENST00000470306 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
SEMA4A-212ENST00000470306 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
SEMA4A-212ENST00000470306 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
SEMA4A-212ENST00000470306 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
SEMA4A-212ENST00000470306 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
SEMA4A-212ENST00000470306 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
SEMA4A-212ENST00000470306 SOGA1O94964 1423 aa16.3■□□□□ 0.2
SEMA4A-212ENST00000470306 EEA1Q15075 1411 aa16.27■□□□□ 0.2
SEMA4A-212ENST00000470306 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.19
SEMA4A-212ENST00000470306 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
SEMA4A-212ENST00000470306 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
SEMA4A-212ENST00000470306 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
SEMA4A-212ENST00000470306 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms