RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
CBWD3-205ENST00000469687 ITGAEP38570 1179 aa21.77■■□□□ 1.08
CBWD3-205ENST00000469687 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
CBWD3-205ENST00000469687 LRRC9Q6ZRR7 1453 aa21.76■■□□□ 1.07
CBWD3-205ENST00000469687 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
CBWD3-205ENST00000469687 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
CBWD3-205ENST00000469687 FHAD1B1AJZ9 1412 aa21.75■■□□□ 1.07
CBWD3-205ENST00000469687 CFAP43Q8NDM7 1665 aa21.74■■□□□ 1.07
CBWD3-205ENST00000469687 TDRD9Q8NDG6 1382 aaKnown RBP21.73■■□□□ 1.07
CBWD3-205ENST00000469687 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
CBWD3-205ENST00000469687 PHLDB1Q86UU1 1377 aa21.7■■□□□ 1.07
CBWD3-205ENST00000469687 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
CBWD3-205ENST00000469687 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
CBWD3-205ENST00000469687 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
CBWD3-205ENST00000469687 NEUROD1Q13562 356 aa21.68■■□□□ 1.06
CBWD3-205ENST00000469687 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
CBWD3-205ENST00000469687 ACIN1Q9UKV3 1341 aaKnown RBP21.66■■□□□ 1.06
CBWD3-205ENST00000469687 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
CBWD3-205ENST00000469687 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
CBWD3-205ENST00000469687 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
CBWD3-205ENST00000469687 CASKIN1Q8WXD9 1431 aa21.61■■□□□ 1.05
CBWD3-205ENST00000469687 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.05
CBWD3-205ENST00000469687 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
CBWD3-205ENST00000469687 MIER1Q8N108 512 aa21.58■■□□□ 1.04
CBWD3-205ENST00000469687 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
CBWD3-205ENST00000469687 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
CBWD3-205ENST00000469687 SAMD9Q5K651 1589 aa21.55■■□□□ 1.04
CBWD3-205ENST00000469687 LRRIQ1Q96JM4 1722 aa21.54■■□□□ 1.04
CBWD3-205ENST00000469687 FMN1Q68DA7 1419 aa21.53■■□□□ 1.04
CBWD3-205ENST00000469687 MAPKBP1O60336 1514 aa21.53■■□□□ 1.04
CBWD3-205ENST00000469687 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.04
CBWD3-205ENST00000469687 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
CBWD3-205ENST00000469687 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
CBWD3-205ENST00000469687 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
CBWD3-205ENST00000469687 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
CBWD3-205ENST00000469687 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
CBWD3-205ENST00000469687 GTF3C3Q9Y5Q9 886 aa21.41■■□□□ 1.02
CBWD3-205ENST00000469687 FGD6Q6ZV73 1430 aa21.4■■□□□ 1.02
CBWD3-205ENST00000469687 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
CBWD3-205ENST00000469687 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
CBWD3-205ENST00000469687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.37■■□□□ 1.01
CBWD3-205ENST00000469687 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
CBWD3-205ENST00000469687 NCOA2Q15596 1464 aa21.34■■□□□ 1.01
CBWD3-205ENST00000469687 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
CBWD3-205ENST00000469687 IQGAP2Q13576 1575 aa21.33■■□□□ 1.01
CBWD3-205ENST00000469687 PTPRKQ15262 1439 aa21.33■■□□□ 1
CBWD3-205ENST00000469687 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
CBWD3-205ENST00000469687 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
CBWD3-205ENST00000469687 SUPT6HQ7KZ85 1726 aaKnown RBP21.31■■□□□ 1
CBWD3-205ENST00000469687 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
CBWD3-205ENST00000469687 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
CBWD3-205ENST00000469687 WDR62O43379 1518 aa21.26■□□□□ 0.99
CBWD3-205ENST00000469687 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
CBWD3-205ENST00000469687 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
CBWD3-205ENST00000469687 HECW1Q76N89 1606 aa21.24■□□□□ 0.99
CBWD3-205ENST00000469687 CCDC18Q5T9S5 1454 aa21.23■□□□□ 0.99
CBWD3-205ENST00000469687 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
CBWD3-205ENST00000469687 PTPN23Q9H3S7 1636 aa21.23■□□□□ 0.99
CBWD3-205ENST00000469687 CDK13Q14004 1512 aaKnown RBP21.22■□□□□ 0.99
CBWD3-205ENST00000469687 HFM1A2PYH4 1435 aa21.22■□□□□ 0.99
CBWD3-205ENST00000469687 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
CBWD3-205ENST00000469687 EPRSP07814 1512 aaKnown RBP21.2■□□□□ 0.98
CBWD3-205ENST00000469687 NAIPQ13075 1403 aa21.18■□□□□ 0.98
CBWD3-205ENST00000469687 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
CBWD3-205ENST00000469687 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
CBWD3-205ENST00000469687 DISP1Q96F81 1524 aa21.12■□□□□ 0.97
CBWD3-205ENST00000469687 KIAA0556O60303 1618 aa21.12■□□□□ 0.97
CBWD3-205ENST00000469687 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
CBWD3-205ENST00000469687 KIAA0586Q9BVV6 1533 aa21.1■□□□□ 0.97
CBWD3-205ENST00000469687 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
CBWD3-205ENST00000469687 GRIN2AQ12879 1464 aa21.1■□□□□ 0.97
CBWD3-205ENST00000469687 CHIC2Q9UKJ5 165 aa21.1■□□□□ 0.97
CBWD3-205ENST00000469687 PPP1R15AO75807 674 aaPredicted RBP21.09■□□□□ 0.97
CBWD3-205ENST00000469687 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
CBWD3-205ENST00000469687 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
CBWD3-205ENST00000469687 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
CBWD3-205ENST00000469687 GCC2Q8IWJ2 1684 aa21.05■□□□□ 0.96
CBWD3-205ENST00000469687 KDM6BO15054 1643 aa21.05■□□□□ 0.96
CBWD3-205ENST00000469687 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
CBWD3-205ENST00000469687 NUP153P49790 1475 aaKnown RBP21.03■□□□□ 0.96
CBWD3-205ENST00000469687 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.96
CBWD3-205ENST00000469687 KCNH8Q96L42 1107 aa21.02■□□□□ 0.95
CBWD3-205ENST00000469687 RAPGEF6Q8TEU7 1601 aa21.01■□□□□ 0.95
CBWD3-205ENST00000469687 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
CBWD3-205ENST00000469687 CEP170Q5SW79 1584 aa21■□□□□ 0.95
CBWD3-205ENST00000469687 DENND4BO75064 1496 aaPredicted RBP20.99■□□□□ 0.95
CBWD3-205ENST00000469687 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
CBWD3-205ENST00000469687 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
CBWD3-205ENST00000469687 KDM5BQ9UGL1 1544 aa20.95■□□□□ 0.94
CBWD3-205ENST00000469687 FBLN2P98095 1184 aa20.95■□□□□ 0.94
CBWD3-205ENST00000469687 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
CBWD3-205ENST00000469687 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
CBWD3-205ENST00000469687 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
CBWD3-205ENST00000469687 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
CBWD3-205ENST00000469687 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
CBWD3-205ENST00000469687 DAPK1P53355 1430 aa20.91■□□□□ 0.94
CBWD3-205ENST00000469687 PELP1Q8IZL8 1130 aaKnown RBP20.9■□□□□ 0.94
CBWD3-205ENST00000469687 PRG4Q92954 1404 aaPredicted RBP20.9■□□□□ 0.94
CBWD3-205ENST00000469687 DNMT1P26358 1616 aaKnown RBP20.89■□□□□ 0.93
CBWD3-205ENST00000469687 ABCC5O15440 1437 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms