RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 CHD1O14646 1710 aa15.7■□□□□ 0.1
SEMA4D-215ENST00000469653 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
SEMA4D-215ENST00000469653 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
SEMA4D-215ENST00000469653 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
SEMA4D-215ENST00000469653 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
SEMA4D-215ENST00000469653 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
SEMA4D-215ENST00000469653 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
SEMA4D-215ENST00000469653 APLP2Q06481 763 aa15.63■□□□□ 0.09
SEMA4D-215ENST00000469653 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SEMA4D-215ENST00000469653 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
SEMA4D-215ENST00000469653 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
SEMA4D-215ENST00000469653 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
SEMA4D-215ENST00000469653 NUP160Q12769 1436 aa15.54■□□□□ 0.08
SEMA4D-215ENST00000469653 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
SEMA4D-215ENST00000469653 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
SEMA4D-215ENST00000469653 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
SEMA4D-215ENST00000469653 KIAA0586Q9BVV6 1533 aa15.48■□□□□ 0.07
SEMA4D-215ENST00000469653 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
SEMA4D-215ENST00000469653 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-215ENST00000469653 ZEB1P37275 1124 aaPredicted RBP15.41■□□□□ 0.06
SEMA4D-215ENST00000469653 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
SEMA4D-215ENST00000469653 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
SEMA4D-215ENST00000469653 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
SEMA4D-215ENST00000469653 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
SEMA4D-215ENST00000469653 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-215ENST00000469653 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
SEMA4D-215ENST00000469653 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
SEMA4D-215ENST00000469653 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
SEMA4D-215ENST00000469653 DISP1Q96F81 1524 aa15.32■□□□□ 0.04
SEMA4D-215ENST00000469653 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
SEMA4D-215ENST00000469653 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
SEMA4D-215ENST00000469653 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
SEMA4D-215ENST00000469653 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
SEMA4D-215ENST00000469653 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
SEMA4D-215ENST00000469653 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
SEMA4D-215ENST00000469653 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
SEMA4D-215ENST00000469653 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
SEMA4D-215ENST00000469653 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
SEMA4D-215ENST00000469653 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
SEMA4D-215ENST00000469653 CLIP1P30622 1438 aa15.28■□□□□ 0.04
SEMA4D-215ENST00000469653 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
SEMA4D-215ENST00000469653 EFCAB5A4FU69 1503 aa15.28■□□□□ 0.04
SEMA4D-215ENST00000469653 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.03
SEMA4D-215ENST00000469653 FHOD3Q2V2M9 1422 aa15.24■□□□□ 0.03
SEMA4D-215ENST00000469653 PTPRGP23470 1445 aa15.21■□□□□ 0.02
SEMA4D-215ENST00000469653 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
SEMA4D-215ENST00000469653 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
SEMA4D-215ENST00000469653 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
SEMA4D-215ENST00000469653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
SEMA4D-215ENST00000469653 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
SEMA4D-215ENST00000469653 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
SEMA4D-215ENST00000469653 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
SEMA4D-215ENST00000469653 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
SEMA4D-215ENST00000469653 ABCA8O94911 1581 aa15.11■□□□□ 0.01
SEMA4D-215ENST00000469653 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
SEMA4D-215ENST00000469653 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
SEMA4D-215ENST00000469653 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0.01
SEMA4D-215ENST00000469653 ABCC2Q92887 1545 aa15.08■□□□□ 0
SEMA4D-215ENST00000469653 PCF11O94913 1555 aaKnown RBP15.08■□□□□ 0
SEMA4D-215ENST00000469653 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
SEMA4D-215ENST00000469653 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
SEMA4D-215ENST00000469653 BCL11AQ9H165 835 aa15.06■□□□□ 0
SEMA4D-215ENST00000469653 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
SEMA4D-215ENST00000469653 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
SEMA4D-215ENST00000469653 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ 0
SEMA4D-215ENST00000469653 ARID3CA6NKF2 412 aa15.05■□□□□ -0
SEMA4D-215ENST00000469653 NEUROD1Q13562 356 aa15.05■□□□□ -0
SEMA4D-215ENST00000469653 HECW1Q76N89 1606 aa15.04■□□□□ -0
SEMA4D-215ENST00000469653 NUP153P49790 1475 aaKnown RBP15.04■□□□□ -0
SEMA4D-215ENST00000469653 CCER1Q8TC90 406 aaPredicted RBP15.04■□□□□ -0
SEMA4D-215ENST00000469653 FYCO1Q9BQS8 1478 aa15.04■□□□□ -0
SEMA4D-215ENST00000469653 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
SEMA4D-215ENST00000469653 ZCCHC11Q5TAX3 1644 aaKnown RBP15.01□□□□□ -0.01
SEMA4D-215ENST00000469653 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
SEMA4D-215ENST00000469653 KDM5BQ9UGL1 1544 aa15□□□□□ -0.01
SEMA4D-215ENST00000469653 ATP10BO94823 1461 aa15□□□□□ -0.01
SEMA4D-215ENST00000469653 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-215ENST00000469653 EPRSP07814 1512 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-215ENST00000469653 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
SEMA4D-215ENST00000469653 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
SEMA4D-215ENST00000469653 TIMELESSQ9UNS1 1208 aa14.95□□□□□ -0.02
SEMA4D-215ENST00000469653 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
SEMA4D-215ENST00000469653 CFAP43Q8NDM7 1665 aa14.92□□□□□ -0.02
SEMA4D-215ENST00000469653 TIAM1Q13009 1591 aa14.92□□□□□ -0.02
SEMA4D-215ENST00000469653 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
SEMA4D-215ENST00000469653 MAPKBP1O60336 1514 aa14.91□□□□□ -0.02
SEMA4D-215ENST00000469653 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
SEMA4D-215ENST00000469653 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
SEMA4D-215ENST00000469653 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-215ENST00000469653 CDK11AQ9UQ88 783 aaPredicted RBP14.9□□□□□ -0.02
SEMA4D-215ENST00000469653 MAP3K1Q13233 1512 aa14.88□□□□□ -0.03
SEMA4D-215ENST00000469653 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
SEMA4D-215ENST00000469653 WDR7Q9Y4E6 1490 aa14.88□□□□□ -0.03
SEMA4D-215ENST00000469653 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
SEMA4D-215ENST00000469653 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-215ENST00000469653 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
SEMA4D-215ENST00000469653 TROQ12816 1431 aaPredicted RBP14.84□□□□□ -0.03
SEMA4D-215ENST00000469653 LRRC9Q6ZRR7 1453 aa14.84□□□□□ -0.03
SEMA4D-215ENST00000469653 EHBP1L1Q8N3D4 1523 aa14.82□□□□□ -0.04
SEMA4D-215ENST00000469653 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms