RNA–Protein interactions for RNA: ENST00000469488.6

SUPT20H-207, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 1,313 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-207ENST00000469488 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
SUPT20H-207ENST00000469488 WIZO95785 1651 aa14.24□□□□□ -0.13
SUPT20H-207ENST00000469488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
SUPT20H-207ENST00000469488 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
SUPT20H-207ENST00000469488 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
SUPT20H-207ENST00000469488 TOPBP1Q92547 1522 aa14.21□□□□□ -0.14
SUPT20H-207ENST00000469488 KIF13AQ9H1H9 1805 aa14.19□□□□□ -0.14
SUPT20H-207ENST00000469488 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
SUPT20H-207ENST00000469488 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
SUPT20H-207ENST00000469488 ERCC6L2Q5T890 1561 aa14.15□□□□□ -0.14
SUPT20H-207ENST00000469488 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
SUPT20H-207ENST00000469488 LMTK3Q96Q04 1460 aa14.14□□□□□ -0.15
SUPT20H-207ENST00000469488 HECW2Q9P2P5 1572 aa14.14□□□□□ -0.15
SUPT20H-207ENST00000469488 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
SUPT20H-207ENST00000469488 CHMP7Q8WUX9 453 aaPredicted RBP14.12□□□□□ -0.15
SUPT20H-207ENST00000469488 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
SUPT20H-207ENST00000469488 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
SUPT20H-207ENST00000469488 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
SUPT20H-207ENST00000469488 SOCS7O14512 581 aa14.06□□□□□ -0.16
SUPT20H-207ENST00000469488 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
SUPT20H-207ENST00000469488 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
SUPT20H-207ENST00000469488 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
SUPT20H-207ENST00000469488 KDM6BO15054 1643 aa14.03□□□□□ -0.16
SUPT20H-207ENST00000469488 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
SUPT20H-207ENST00000469488 FAM69CQ0P6D2 419 aa14.02□□□□□ -0.17
SUPT20H-207ENST00000469488 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.17
SUPT20H-207ENST00000469488 ADGRL1O94910 1474 aa14□□□□□ -0.17
SUPT20H-207ENST00000469488 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
SUPT20H-207ENST00000469488 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
SUPT20H-207ENST00000469488 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.18
SUPT20H-207ENST00000469488 POLA2Q14181 598 aa13.93□□□□□ -0.18
SUPT20H-207ENST00000469488 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
SUPT20H-207ENST00000469488 SOGA1O94964 1423 aa13.92□□□□□ -0.18
SUPT20H-207ENST00000469488 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
SUPT20H-207ENST00000469488 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
SUPT20H-207ENST00000469488 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
SUPT20H-207ENST00000469488 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
SUPT20H-207ENST00000469488 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
SUPT20H-207ENST00000469488 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
SUPT20H-207ENST00000469488 DIP2BQ9P265 1576 aa13.88□□□□□ -0.19
SUPT20H-207ENST00000469488 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
SUPT20H-207ENST00000469488 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
SUPT20H-207ENST00000469488 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
SUPT20H-207ENST00000469488 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
SUPT20H-207ENST00000469488 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
SUPT20H-207ENST00000469488 MAPKBP1O60336 1514 aa13.78□□□□□ -0.2
SUPT20H-207ENST00000469488 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
SUPT20H-207ENST00000469488 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.2
SUPT20H-207ENST00000469488 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
SUPT20H-207ENST00000469488 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
SUPT20H-207ENST00000469488 NUP160Q12769 1436 aa13.7□□□□□ -0.22
SUPT20H-207ENST00000469488 PRG4Q92954 1404 aaPredicted RBP13.69□□□□□ -0.22
SUPT20H-207ENST00000469488 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
SUPT20H-207ENST00000469488 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
SUPT20H-207ENST00000469488 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
SUPT20H-207ENST00000469488 PPRC1Q5VV67 1664 aaKnown RBP13.65□□□□□ -0.22
SUPT20H-207ENST00000469488 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
SUPT20H-207ENST00000469488 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
SUPT20H-207ENST00000469488 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
SUPT20H-207ENST00000469488 CUX1P39880 1505 aa13.61□□□□□ -0.23
SUPT20H-207ENST00000469488 ABCA5Q8WWZ7 1642 aa13.6□□□□□ -0.23
SUPT20H-207ENST00000469488 SP7Q8TDD2 431 aaPredicted RBP13.6□□□□□ -0.23
SUPT20H-207ENST00000469488 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
SUPT20H-207ENST00000469488 ADAMTS12P58397 1594 aa13.58□□□□□ -0.24
SUPT20H-207ENST00000469488 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
SUPT20H-207ENST00000469488 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-207ENST00000469488 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
SUPT20H-207ENST00000469488 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.25
SUPT20H-207ENST00000469488 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
SUPT20H-207ENST00000469488 FKBP8Q14318 412 aa13.49□□□□□ -0.25
SUPT20H-207ENST00000469488 GLI2P10070 1586 aa13.48□□□□□ -0.25
SUPT20H-207ENST00000469488 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
SUPT20H-207ENST00000469488 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
SUPT20H-207ENST00000469488 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
SUPT20H-207ENST00000469488 PTPRMP28827 1452 aa13.46□□□□□ -0.25
SUPT20H-207ENST00000469488 ASXL2Q76L83 1435 aa13.45□□□□□ -0.26
SUPT20H-207ENST00000469488 KIF21BO75037 1637 aa13.45□□□□□ -0.26
SUPT20H-207ENST00000469488 HSPA2P54652 639 aa13.43□□□□□ -0.26
SUPT20H-207ENST00000469488 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
SUPT20H-207ENST00000469488 MAP3K4Q9Y6R4 1608 aa13.41□□□□□ -0.26
SUPT20H-207ENST00000469488 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
SUPT20H-207ENST00000469488 TTBK1Q5TCY1 1321 aaPredicted RBP13.41□□□□□ -0.26
SUPT20H-207ENST00000469488 TEX14Q8IWB6 1497 aa13.4□□□□□ -0.26
SUPT20H-207ENST00000469488 HAX1O00165 279 aa13.39□□□□□ -0.27
SUPT20H-207ENST00000469488 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
SUPT20H-207ENST00000469488 CUL7Q14999 1698 aa13.37□□□□□ -0.27
SUPT20H-207ENST00000469488 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
SUPT20H-207ENST00000469488 ADAMTSL3P82987 1691 aa13.36□□□□□ -0.27
SUPT20H-207ENST00000469488 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
SUPT20H-207ENST00000469488 EPRSP07814 1512 aaKnown RBP13.36□□□□□ -0.27
SUPT20H-207ENST00000469488 PTPRGP23470 1445 aa13.33□□□□□ -0.28
SUPT20H-207ENST00000469488 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
SUPT20H-207ENST00000469488 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
SUPT20H-207ENST00000469488 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
SUPT20H-207ENST00000469488 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.29
SUPT20H-207ENST00000469488 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
SUPT20H-207ENST00000469488 BCORL1Q5H9F3 1711 aa13.22□□□□□ -0.29
SUPT20H-207ENST00000469488 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.3
SUPT20H-207ENST00000469488 EVX2Q03828 476 aa13.2□□□□□ -0.3
SUPT20H-207ENST00000469488 UHRF1BP1LA0JNW5 1464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms