RNA–Protein interactions for RNA: ENST00000469190.1

PLXNB3-205, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-205ENST00000469190 CLIP1P30622 1438 aa22.74■■□□□ 1.23
PLXNB3-205ENST00000469190 CTTNBP2Q8WZ74 1663 aa22.72■■□□□ 1.23
PLXNB3-205ENST00000469190 CHD1O14646 1710 aa22.62■■□□□ 1.21
PLXNB3-205ENST00000469190 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
PLXNB3-205ENST00000469190 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
PLXNB3-205ENST00000469190 KIAA0586Q9BVV6 1533 aa22.6■■□□□ 1.21
PLXNB3-205ENST00000469190 NUP160Q12769 1436 aa22.59■■□□□ 1.21
PLXNB3-205ENST00000469190 ARHGAP35Q9NRY4 1499 aa22.57■■□□□ 1.2
PLXNB3-205ENST00000469190 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
PLXNB3-205ENST00000469190 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
PLXNB3-205ENST00000469190 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
PLXNB3-205ENST00000469190 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
PLXNB3-205ENST00000469190 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
PLXNB3-205ENST00000469190 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
PLXNB3-205ENST00000469190 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
PLXNB3-205ENST00000469190 JPH4Q96JJ6 628 aa22.43■■□□□ 1.18
PLXNB3-205ENST00000469190 KIAA0556O60303 1618 aa22.37■■□□□ 1.17
PLXNB3-205ENST00000469190 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
PLXNB3-205ENST00000469190 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
PLXNB3-205ENST00000469190 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
PLXNB3-205ENST00000469190 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
PLXNB3-205ENST00000469190 APLP2Q06481 763 aa22.33■■□□□ 1.17
PLXNB3-205ENST00000469190 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
PLXNB3-205ENST00000469190 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
PLXNB3-205ENST00000469190 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
PLXNB3-205ENST00000469190 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
PLXNB3-205ENST00000469190 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
PLXNB3-205ENST00000469190 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
PLXNB3-205ENST00000469190 PPARGC1BQ86YN6 1023 aaKnown RBP22.25■■□□□ 1.15
PLXNB3-205ENST00000469190 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
PLXNB3-205ENST00000469190 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
PLXNB3-205ENST00000469190 ERCC6L2Q5T890 1561 aa22.17■■□□□ 1.14
PLXNB3-205ENST00000469190 PTPRGP23470 1445 aa22.16■■□□□ 1.14
PLXNB3-205ENST00000469190 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
PLXNB3-205ENST00000469190 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
PLXNB3-205ENST00000469190 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
PLXNB3-205ENST00000469190 MAP3K1Q13233 1512 aa22.11■■□□□ 1.13
PLXNB3-205ENST00000469190 PLB1Q6P1J6 1458 aa22.1■■□□□ 1.13
PLXNB3-205ENST00000469190 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
PLXNB3-205ENST00000469190 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.12
PLXNB3-205ENST00000469190 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
PLXNB3-205ENST00000469190 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
PLXNB3-205ENST00000469190 ABCA8O94911 1581 aa22.06■■□□□ 1.12
PLXNB3-205ENST00000469190 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
PLXNB3-205ENST00000469190 NUP153P49790 1475 aaKnown RBP22.04■■□□□ 1.12
PLXNB3-205ENST00000469190 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
PLXNB3-205ENST00000469190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
PLXNB3-205ENST00000469190 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
PLXNB3-205ENST00000469190 UACAQ9BZF9 1416 aa22.02■■□□□ 1.12
PLXNB3-205ENST00000469190 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
PLXNB3-205ENST00000469190 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
PLXNB3-205ENST00000469190 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
PLXNB3-205ENST00000469190 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
PLXNB3-205ENST00000469190 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
PLXNB3-205ENST00000469190 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
PLXNB3-205ENST00000469190 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
PLXNB3-205ENST00000469190 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
PLXNB3-205ENST00000469190 UHRF1BP1LA0JNW5 1464 aa21.9■■□□□ 1.1
PLXNB3-205ENST00000469190 ATP10BO94823 1461 aa21.9■■□□□ 1.1
PLXNB3-205ENST00000469190 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
PLXNB3-205ENST00000469190 MAGI3Q5TCQ9 1506 aa21.88■■□□□ 1.09
PLXNB3-205ENST00000469190 PLEKHD1A6NEE1 506 aa21.85■■□□□ 1.09
PLXNB3-205ENST00000469190 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
PLXNB3-205ENST00000469190 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
PLXNB3-205ENST00000469190 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
PLXNB3-205ENST00000469190 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
PLXNB3-205ENST00000469190 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.09
PLXNB3-205ENST00000469190 ADCY10Q96PN6 1610 aa21.83■■□□□ 1.08
PLXNB3-205ENST00000469190 NCOA2Q15596 1464 aa21.81■■□□□ 1.08
PLXNB3-205ENST00000469190 KDM5BQ9UGL1 1544 aa21.8■■□□□ 1.08
PLXNB3-205ENST00000469190 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
PLXNB3-205ENST00000469190 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
PLXNB3-205ENST00000469190 NPM1P06748 294 aaKnown RBP eCLIP21.77■■□□□ 1.08
PLXNB3-205ENST00000469190 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
PLXNB3-205ENST00000469190 KIF14Q15058 1648 aa21.73■■□□□ 1.07
PLXNB3-205ENST00000469190 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
PLXNB3-205ENST00000469190 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
PLXNB3-205ENST00000469190 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
PLXNB3-205ENST00000469190 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
PLXNB3-205ENST00000469190 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
PLXNB3-205ENST00000469190 KCNH8Q96L42 1107 aa21.67■■□□□ 1.06
PLXNB3-205ENST00000469190 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.06
PLXNB3-205ENST00000469190 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
PLXNB3-205ENST00000469190 ABCC10Q5T3U5 1492 aa21.62■■□□□ 1.05
PLXNB3-205ENST00000469190 MIA2Q96PC5 1412 aa21.61■■□□□ 1.05
PLXNB3-205ENST00000469190 ITSN2Q9NZM3 1697 aa21.6■■□□□ 1.05
PLXNB3-205ENST00000469190 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
PLXNB3-205ENST00000469190 ITGAEP38570 1179 aa21.59■■□□□ 1.05
PLXNB3-205ENST00000469190 CFDP1Q9UEE9 299 aaPredicted RBP21.59■■□□□ 1.05
PLXNB3-205ENST00000469190 PTPN23Q9H3S7 1636 aa21.58■■□□□ 1.05
PLXNB3-205ENST00000469190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.57■■□□□ 1.04
PLXNB3-205ENST00000469190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
PLXNB3-205ENST00000469190 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
PLXNB3-205ENST00000469190 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
PLXNB3-205ENST00000469190 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
PLXNB3-205ENST00000469190 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
PLXNB3-205ENST00000469190 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
PLXNB3-205ENST00000469190 PREX2Q70Z35 1606 aa21.5■■□□□ 1.03
PLXNB3-205ENST00000469190 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
PLXNB3-205ENST00000469190 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms