RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 FBLN2P98095 1184 aa37.53■■■■□ 3.6
MTA1-209ENST00000469140 RANGAP1P46060 587 aaPredicted RBP37.48■■■■□ 3.59
MTA1-209ENST00000469140 NUP160Q12769 1436 aa37.4■■■■□ 3.58
MTA1-209ENST00000469140 KIAA0586Q9BVV6 1533 aa37.4■■■■□ 3.58
MTA1-209ENST00000469140 IQGAP2Q13576 1575 aa37.37■■■■□ 3.57
MTA1-209ENST00000469140 CEP170Q5SW79 1584 aa37.35■■■■□ 3.57
MTA1-209ENST00000469140 ARHGAP35Q9NRY4 1499 aa37.35■■■■□ 3.57
MTA1-209ENST00000469140 CHD1O14646 1710 aa37.33■■■■□ 3.57
MTA1-209ENST00000469140 EFCAB5A4FU69 1503 aa37.3■■■■□ 3.56
MTA1-209ENST00000469140 ARAP1Q96P48 1450 aa37.25■■■■□ 3.55
MTA1-209ENST00000469140 UGGT2Q9NYU1 1516 aa37.21■■■■□ 3.55
MTA1-209ENST00000469140 VPS8Q8N3P4 1428 aa37.21■■■■□ 3.55
MTA1-209ENST00000469140 SAMD9Q5K651 1589 aa37.19■■■■□ 3.54
MTA1-209ENST00000469140 P3H3Q8IVL6 736 aa37.12■■■■□ 3.53
MTA1-209ENST00000469140 JPH4Q96JJ6 628 aa37.09■■■■□ 3.53
MTA1-209ENST00000469140 FHOD3Q2V2M9 1422 aa37.08■■■■□ 3.53
MTA1-209ENST00000469140 DISP1Q96F81 1524 aa37.02■■■■□ 3.52
MTA1-209ENST00000469140 FMN1Q68DA7 1419 aa36.98■■■■□ 3.51
MTA1-209ENST00000469140 KIAA0556O60303 1618 aa36.98■■■■□ 3.51
MTA1-209ENST00000469140 CLASP1Q7Z460 1538 aa36.98■■■■□ 3.51
MTA1-209ENST00000469140 CARMIL2Q6F5E8 1435 aa36.97■■■■□ 3.51
MTA1-209ENST00000469140 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
MTA1-209ENST00000469140 OSCARQ8IYS5 282 aa36.9■■■■□ 3.5
MTA1-209ENST00000469140 PRG4Q92954 1404 aaPredicted RBP36.87■■■■□ 3.49
MTA1-209ENST00000469140 APLP2Q06481 763 aa36.86■■■■□ 3.49
MTA1-209ENST00000469140 CASKIN1Q8WXD9 1431 aa36.83■■■■□ 3.49
MTA1-209ENST00000469140 FYCO1Q9BQS8 1478 aa36.81■■■■□ 3.48
MTA1-209ENST00000469140 PCF11O94913 1555 aaKnown RBP36.79■■■■□ 3.48
MTA1-209ENST00000469140 MAP3K1Q13233 1512 aa36.7■■■■□ 3.46
MTA1-209ENST00000469140 ATP1B4Q9UN42 357 aaPredicted RBP36.67■■■■□ 3.46
MTA1-209ENST00000469140 PPARGC1BQ86YN6 1023 aaKnown RBP36.65■■■■□ 3.46
MTA1-209ENST00000469140 TTBK1Q5TCY1 1321 aaPredicted RBP36.65■■■■□ 3.46
MTA1-209ENST00000469140 PTPRGP23470 1445 aa36.62■■■■□ 3.45
MTA1-209ENST00000469140 ERCC6L2Q5T890 1561 aa36.61■■■■□ 3.45
MTA1-209ENST00000469140 HECW1Q76N89 1606 aa36.6■■■■□ 3.45
MTA1-209ENST00000469140 TIAM1Q13009 1591 aa36.6■■■■□ 3.45
MTA1-209ENST00000469140 RAPGEF6Q8TEU7 1601 aa36.56■■■■□ 3.44
MTA1-209ENST00000469140 CFAP43Q8NDM7 1665 aa36.53■■■■□ 3.44
MTA1-209ENST00000469140 CCDC18Q5T9S5 1454 aa36.52■■■■□ 3.44
MTA1-209ENST00000469140 PLB1Q6P1J6 1458 aa36.52■■■■□ 3.44
MTA1-209ENST00000469140 KANK4Q5T7N3 995 aaPredicted RBP36.51■■■■□ 3.43
MTA1-209ENST00000469140 ABCA8O94911 1581 aa36.5■■■■□ 3.43
MTA1-209ENST00000469140 EPRSP07814 1512 aaKnown RBP36.47■■■■□ 3.43
MTA1-209ENST00000469140 NUP153P49790 1475 aaKnown RBP36.47■■■■□ 3.43
MTA1-209ENST00000469140 LRRIQ1Q96JM4 1722 aa36.46■■■■□ 3.43
MTA1-209ENST00000469140 LRRC9Q6ZRR7 1453 aa36.45■■■■□ 3.42
MTA1-209ENST00000469140 TRIM26Q12899 539 aaPredicted RBP36.43■■■■□ 3.42
MTA1-209ENST00000469140 UACAQ9BZF9 1416 aa36.41■■■■□ 3.42
MTA1-209ENST00000469140 CDK13Q14004 1512 aaKnown RBP36.35■■■■□ 3.41
MTA1-209ENST00000469140 MTUS2Q5JR59 1369 aa36.32■■■■□ 3.4
MTA1-209ENST00000469140 ARID3CA6NKF2 412 aa36.3■■■■□ 3.4
MTA1-209ENST00000469140 ABCC2Q92887 1545 aa36.29■■■■□ 3.4
MTA1-209ENST00000469140 CDK11AQ9UQ88 783 aaPredicted RBP36.28■■■■□ 3.4
MTA1-209ENST00000469140 UHRF1BP1LA0JNW5 1464 aa36.27■■■■□ 3.4
MTA1-209ENST00000469140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.26■■■■□ 3.39
MTA1-209ENST00000469140 HNRNPUL2Q1KMD3 747 aaKnown RBP36.26■■■■□ 3.39
MTA1-209ENST00000469140 EHBP1L1Q8N3D4 1523 aa36.25■■■■□ 3.39
MTA1-209ENST00000469140 ATP10BO94823 1461 aa36.25■■■■□ 3.39
MTA1-209ENST00000469140 ARHGEF11O15085 1522 aa36.22■■■■□ 3.39
MTA1-209ENST00000469140 MAGI3Q5TCQ9 1506 aa36.21■■■■□ 3.39
MTA1-209ENST00000469140 PCGF6Q9BYE7 350 aa36.2■■■■□ 3.39
MTA1-209ENST00000469140 SUPT6HQ7KZ85 1726 aaKnown RBP36.11■■■■□ 3.37
MTA1-209ENST00000469140 PLEKHD1A6NEE1 506 aa36.1■■■■□ 3.37
MTA1-209ENST00000469140 TROQ12816 1431 aaPredicted RBP36.1■■■■□ 3.37
MTA1-209ENST00000469140 KDM5BQ9UGL1 1544 aa36.1■■■■□ 3.37
MTA1-209ENST00000469140 ADCY10Q96PN6 1610 aa36.08■■■■□ 3.37
MTA1-209ENST00000469140 NCOA2Q15596 1464 aa36.08■■■■□ 3.37
MTA1-209ENST00000469140 PHLDB1Q86UU1 1377 aa36.06■■■■□ 3.36
MTA1-209ENST00000469140 RIMBP3CA6NJZ7 1639 aa36.06■■■■□ 3.36
MTA1-209ENST00000469140 RIMBP3BA6NNM3 1639 aa36.06■■■■□ 3.36
MTA1-209ENST00000469140 RIMBP3Q9UFD9 1639 aa36.06■■■■□ 3.36
MTA1-209ENST00000469140 RRBP1Q9P2E9 1410 aaKnown RBP36.02■■■■□ 3.36
MTA1-209ENST00000469140 ZCCHC11Q5TAX3 1644 aaKnown RBP36■■■■□ 3.35
MTA1-209ENST00000469140 CCNB3Q8WWL7 1395 aa35.94■■■■□ 3.34
MTA1-209ENST00000469140 MYOM3Q5VTT5 1437 aa35.93■■■■□ 3.34
MTA1-209ENST00000469140 NPM1P06748 294 aaKnown RBP eCLIP35.89■■■■□ 3.34
MTA1-209ENST00000469140 CYB5RLQ6IPT4 315 aa35.89■■■■□ 3.34
MTA1-209ENST00000469140 KIF14Q15058 1648 aa35.89■■■■□ 3.34
MTA1-209ENST00000469140 FGD6Q6ZV73 1430 aa35.87■■■■□ 3.33
MTA1-209ENST00000469140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.81■■■■□ 3.321e-11■■■□□ 17.8
MTA1-209ENST00000469140 MIA2Q96PC5 1412 aa35.8■■■■□ 3.32
MTA1-209ENST00000469140 ABCC10Q5T3U5 1492 aa35.79■■■■□ 3.32
MTA1-209ENST00000469140 WDR7Q9Y4E6 1490 aa35.77■■■■□ 3.32
MTA1-209ENST00000469140 GPATCH8Q9UKJ3 1502 aaKnown RBP35.74■■■■□ 3.31
MTA1-209ENST00000469140 FAM50AQ14320 339 aaKnown RBP35.74■■■■□ 3.31
MTA1-209ENST00000469140 ASXL2Q76L83 1435 aa35.74■■■■□ 3.31
MTA1-209ENST00000469140 KCNH8Q96L42 1107 aa35.72■■■■□ 3.31
MTA1-209ENST00000469140 ITSN2Q9NZM3 1697 aa35.72■■■■□ 3.31
MTA1-209ENST00000469140 PTPN23Q9H3S7 1636 aa35.69■■■■□ 3.3
MTA1-209ENST00000469140 TCOF1Q13428 1488 aaKnown RBP35.69■■■■□ 3.3
MTA1-209ENST00000469140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.68■■■■□ 3.38e-8■■■□□ 14.8
MTA1-209ENST00000469140 CFDP1Q9UEE9 299 aaPredicted RBP35.66■■■■□ 3.3
MTA1-209ENST00000469140 CDC42BPAQ5VT25 1732 aa35.63■■■■□ 3.29
MTA1-209ENST00000469140 TTC37Q6PGP7 1564 aa35.61■■■■□ 3.29
MTA1-209ENST00000469140 MAPKBP1O60336 1514 aa35.59■■■■□ 3.29
MTA1-209ENST00000469140 PREX2Q70Z35 1606 aa35.55■■■■□ 3.28
MTA1-209ENST00000469140 ITGAEP38570 1179 aa35.55■■■■□ 3.28
MTA1-209ENST00000469140 MYO5CQ9NQX4 1742 aa35.51■■■■□ 3.28
MTA1-209ENST00000469140 PLCH2O75038 1416 aa35.51■■■■□ 3.28
MTA1-209ENST00000469140 ABCA9Q8IUA7 1624 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms