RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 FBLN2P98095 1184 aa18.48■□□□□ 0.55
MSH5-214ENST00000468602 SHROOM2Q13796 1616 aa18.46■□□□□ 0.55
MSH5-214ENST00000468602 CTTNBP2Q8WZ74 1663 aa18.46■□□□□ 0.55
MSH5-214ENST00000468602 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
MSH5-214ENST00000468602 IQGAP2Q13576 1575 aa18.43■□□□□ 0.54
MSH5-214ENST00000468602 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
MSH5-214ENST00000468602 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
MSH5-214ENST00000468602 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
MSH5-214ENST00000468602 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
MSH5-214ENST00000468602 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
MSH5-214ENST00000468602 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
MSH5-214ENST00000468602 DISP1Q96F81 1524 aa18.3■□□□□ 0.52
MSH5-214ENST00000468602 CARMIL2Q6F5E8 1435 aa18.27■□□□□ 0.52
MSH5-214ENST00000468602 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
MSH5-214ENST00000468602 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
MSH5-214ENST00000468602 KIAA0556O60303 1618 aa18.26■□□□□ 0.51
MSH5-214ENST00000468602 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
MSH5-214ENST00000468602 ARHGAP35Q9NRY4 1499 aa18.22■□□□□ 0.51
MSH5-214ENST00000468602 CLIP1P30622 1438 aa18.2■□□□□ 0.5
MSH5-214ENST00000468602 CEP162Q5TB80 1403 aa18.2■□□□□ 0.5
MSH5-214ENST00000468602 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
MSH5-214ENST00000468602 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
MSH5-214ENST00000468602 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
MSH5-214ENST00000468602 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
MSH5-214ENST00000468602 PTPRGP23470 1445 aa18.12■□□□□ 0.49
MSH5-214ENST00000468602 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
MSH5-214ENST00000468602 FMN1Q68DA7 1419 aa18.11■□□□□ 0.49
MSH5-214ENST00000468602 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
MSH5-214ENST00000468602 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
MSH5-214ENST00000468602 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
MSH5-214ENST00000468602 FHOD3Q2V2M9 1422 aa18.08■□□□□ 0.49
MSH5-214ENST00000468602 ABCA8O94911 1581 aa18.07■□□□□ 0.48
MSH5-214ENST00000468602 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
MSH5-214ENST00000468602 ABCC2Q92887 1545 aa18.02■□□□□ 0.47
MSH5-214ENST00000468602 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
MSH5-214ENST00000468602 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
MSH5-214ENST00000468602 RAPGEF6Q8TEU7 1601 aa17.99■□□□□ 0.47
MSH5-214ENST00000468602 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
MSH5-214ENST00000468602 PLB1Q6P1J6 1458 aa17.98■□□□□ 0.47
MSH5-214ENST00000468602 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
MSH5-214ENST00000468602 KDM5BQ9UGL1 1544 aa17.98■□□□□ 0.47
MSH5-214ENST00000468602 ADCY10Q96PN6 1610 aa17.97■□□□□ 0.47
MSH5-214ENST00000468602 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
MSH5-214ENST00000468602 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
MSH5-214ENST00000468602 NUP153P49790 1475 aaKnown RBP17.95■□□□□ 0.46
MSH5-214ENST00000468602 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
MSH5-214ENST00000468602 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
MSH5-214ENST00000468602 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
MSH5-214ENST00000468602 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
MSH5-214ENST00000468602 EPRSP07814 1512 aaKnown RBP17.89■□□□□ 0.45
MSH5-214ENST00000468602 ATP10BO94823 1461 aa17.88■□□□□ 0.45
MSH5-214ENST00000468602 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
MSH5-214ENST00000468602 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
MSH5-214ENST00000468602 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
MSH5-214ENST00000468602 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
MSH5-214ENST00000468602 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
MSH5-214ENST00000468602 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
MSH5-214ENST00000468602 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
MSH5-214ENST00000468602 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
MSH5-214ENST00000468602 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.44
MSH5-214ENST00000468602 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
MSH5-214ENST00000468602 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
MSH5-214ENST00000468602 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
MSH5-214ENST00000468602 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
MSH5-214ENST00000468602 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
MSH5-214ENST00000468602 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
MSH5-214ENST00000468602 GLI2P10070 1586 aa17.71■□□□□ 0.43
MSH5-214ENST00000468602 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
MSH5-214ENST00000468602 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
MSH5-214ENST00000468602 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
MSH5-214ENST00000468602 APLP2Q06481 763 aa17.66■□□□□ 0.42
MSH5-214ENST00000468602 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
MSH5-214ENST00000468602 DIP2BQ9P265 1576 aa17.65■□□□□ 0.42
MSH5-214ENST00000468602 MTUS2Q5JR59 1369 aa17.65■□□□□ 0.42
MSH5-214ENST00000468602 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
MSH5-214ENST00000468602 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
MSH5-214ENST00000468602 KIF14Q15058 1648 aa17.62■□□□□ 0.41
MSH5-214ENST00000468602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
MSH5-214ENST00000468602 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
MSH5-214ENST00000468602 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
MSH5-214ENST00000468602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.61■□□□□ 0.41
MSH5-214ENST00000468602 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
MSH5-214ENST00000468602 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
MSH5-214ENST00000468602 KIF13AQ9H1H9 1805 aa17.59■□□□□ 0.41
MSH5-214ENST00000468602 MAP3K4Q9Y6R4 1608 aa17.59■□□□□ 0.41
MSH5-214ENST00000468602 NCOA2Q15596 1464 aa17.57■□□□□ 0.4
MSH5-214ENST00000468602 PLCH2O75038 1416 aa17.55■□□□□ 0.4
MSH5-214ENST00000468602 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
MSH5-214ENST00000468602 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
MSH5-214ENST00000468602 MIA2Q96PC5 1412 aa17.52■□□□□ 0.4
MSH5-214ENST00000468602 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
MSH5-214ENST00000468602 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
MSH5-214ENST00000468602 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
MSH5-214ENST00000468602 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
MSH5-214ENST00000468602 KCNH8Q96L42 1107 aa17.51■□□□□ 0.39
MSH5-214ENST00000468602 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
MSH5-214ENST00000468602 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
MSH5-214ENST00000468602 MYOM3Q5VTT5 1437 aa17.5■□□□□ 0.39
MSH5-214ENST00000468602 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
MSH5-214ENST00000468602 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms