RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 KIF27Q86VH2 1401 aa6.18□□□□□ -1.42
COMMD3-207ENST00000468469 CUL7Q14999 1698 aa6.17□□□□□ -1.42
COMMD3-207ENST00000468469 FHAD1B1AJZ9 1412 aa6.16□□□□□ -1.42
COMMD3-207ENST00000468469 FBLN2P98095 1184 aa6.16□□□□□ -1.42
COMMD3-207ENST00000468469 TRIM41Q8WV44 630 aa6.16□□□□□ -1.42
COMMD3-207ENST00000468469 GRIN2AQ12879 1464 aa6.15□□□□□ -1.42
COMMD3-207ENST00000468469 CLASP1Q7Z460 1538 aa6.15□□□□□ -1.42
COMMD3-207ENST00000468469 OSCARQ8IYS5 282 aa6.15□□□□□ -1.42
COMMD3-207ENST00000468469 DNAJC5Q9H3Z4 198 aa6.15□□□□□ -1.42
COMMD3-207ENST00000468469 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
COMMD3-207ENST00000468469 CEP170Q5SW79 1584 aa6.14□□□□□ -1.43
COMMD3-207ENST00000468469 NUP160Q12769 1436 aa6.13□□□□□ -1.43
COMMD3-207ENST00000468469 RUSC2Q8N2Y8 1516 aa6.13□□□□□ -1.43
COMMD3-207ENST00000468469 IGF1RP08069 1367 aa6.12□□□□□ -1.43
COMMD3-207ENST00000468469 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
COMMD3-207ENST00000468469 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
COMMD3-207ENST00000468469 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
COMMD3-207ENST00000468469 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
COMMD3-207ENST00000468469 EEA1Q15075 1411 aa6.1□□□□□ -1.43
COMMD3-207ENST00000468469 CARMIL1Q5VZK9 1371 aa6.1□□□□□ -1.43
COMMD3-207ENST00000468469 RAPGEF2Q9Y4G8 1499 aa6.09□□□□□ -1.43
COMMD3-207ENST00000468469 SHROOM2Q13796 1616 aa6.08□□□□□ -1.44
COMMD3-207ENST00000468469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.08□□□□□ -1.44
COMMD3-207ENST00000468469 PRXQ9BXM0 1461 aa6.08□□□□□ -1.44
COMMD3-207ENST00000468469 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
COMMD3-207ENST00000468469 KIAA0586Q9BVV6 1533 aa6.06□□□□□ -1.44
COMMD3-207ENST00000468469 ARAP1Q96P48 1450 aa6.06□□□□□ -1.44
COMMD3-207ENST00000468469 CTTNBP2Q8WZ74 1663 aa6.06□□□□□ -1.44
COMMD3-207ENST00000468469 KIF21BO75037 1637 aa6.06□□□□□ -1.44
COMMD3-207ENST00000468469 ERCC6L2Q5T890 1561 aa6.05□□□□□ -1.44
COMMD3-207ENST00000468469 PRG4Q92954 1404 aaPredicted RBP6.03□□□□□ -1.44
COMMD3-207ENST00000468469 FAM9AQ8IZU1 332 aaPredicted RBP6.03□□□□□ -1.44
COMMD3-207ENST00000468469 CSRNP3Q8WYN3 585 aa6.03□□□□□ -1.44
COMMD3-207ENST00000468469 UGGT2Q9NYU1 1516 aa6.02□□□□□ -1.45
COMMD3-207ENST00000468469 KIAA0556O60303 1618 aa6.02□□□□□ -1.45
COMMD3-207ENST00000468469 GOLGA3Q08378 1498 aa6.02□□□□□ -1.45
COMMD3-207ENST00000468469 DSG3P32926 999 aa6.01□□□□□ -1.45
COMMD3-207ENST00000468469 JPH4Q96JJ6 628 aa6.01□□□□□ -1.45
COMMD3-207ENST00000468469 CARMIL2Q6F5E8 1435 aa6□□□□□ -1.45
COMMD3-207ENST00000468469 DISP1Q96F81 1524 aa5.99□□□□□ -1.45
COMMD3-207ENST00000468469 CYB5RLQ6IPT4 315 aa5.99□□□□□ -1.45
COMMD3-207ENST00000468469 SAMD9Q5K651 1589 aa5.97□□□□□ -1.45
COMMD3-207ENST00000468469 TNIKQ9UKE5 1360 aa5.97□□□□□ -1.45
COMMD3-207ENST00000468469 SPINK5Q9NQ38 1064 aaPredicted RBP5.97□□□□□ -1.45
COMMD3-207ENST00000468469 EFCAB5A4FU69 1503 aa5.97□□□□□ -1.45
COMMD3-207ENST00000468469 ADCY10Q96PN6 1610 aa5.96□□□□□ -1.45
COMMD3-207ENST00000468469 EHMT2Q96KQ7 1210 aa5.96□□□□□ -1.46
COMMD3-207ENST00000468469 CAPN15O75808 1086 aa5.95□□□□□ -1.46
COMMD3-207ENST00000468469 PTPRGP23470 1445 aa5.95□□□□□ -1.46
COMMD3-207ENST00000468469 ABCC2Q92887 1545 aa5.94□□□□□ -1.46
COMMD3-207ENST00000468469 UACAQ9BZF9 1416 aa5.94□□□□□ -1.46
COMMD3-207ENST00000468469 UBTFP17480 764 aaKnown RBP5.94□□□□□ -1.46
COMMD3-207ENST00000468469 U3KPZ7 1027 aaPredicted RBP5.94□□□□□ -1.46
COMMD3-207ENST00000468469 TTBK1Q5TCY1 1321 aaPredicted RBP5.94□□□□□ -1.46
COMMD3-207ENST00000468469 FHOD3Q2V2M9 1422 aa5.93□□□□□ -1.46
COMMD3-207ENST00000468469 RANGAP1P46060 587 aaPredicted RBP5.93□□□□□ -1.46
COMMD3-207ENST00000468469 UHRF1BP1LA0JNW5 1464 aa5.93□□□□□ -1.46
COMMD3-207ENST00000468469 MAPKBP1O60336 1514 aa5.93□□□□□ -1.46
COMMD3-207ENST00000468469 ABCA8O94911 1581 aa5.93□□□□□ -1.46
COMMD3-207ENST00000468469 PLB1Q6P1J6 1458 aa5.92□□□□□ -1.46
COMMD3-207ENST00000468469 ARHGAP35Q9NRY4 1499 aa5.91□□□□□ -1.46
COMMD3-207ENST00000468469 ZCCHC11Q5TAX3 1644 aaKnown RBP5.91□□□□□ -1.46
COMMD3-207ENST00000468469 RAPGEF6Q8TEU7 1601 aa5.91□□□□□ -1.46
COMMD3-207ENST00000468469 KDM5BQ9UGL1 1544 aa5.9□□□□□ -1.46
COMMD3-207ENST00000468469 P3H3Q8IVL6 736 aa5.9□□□□□ -1.46
COMMD3-207ENST00000468469 DIP2BQ9P265 1576 aa5.89□□□□□ -1.47
COMMD3-207ENST00000468469 NPM1P06748 294 aaKnown RBP eCLIP5.89□□□□□ -1.47
COMMD3-207ENST00000468469 CLIP1P30622 1438 aa5.89□□□□□ -1.47
COMMD3-207ENST00000468469 FMN1Q68DA7 1419 aa5.89□□□□□ -1.47
COMMD3-207ENST00000468469 HECW1Q76N89 1606 aa5.88□□□□□ -1.47
COMMD3-207ENST00000468469 CEP162Q5TB80 1403 aa5.88□□□□□ -1.47
COMMD3-207ENST00000468469 ASXL2Q76L83 1435 aa5.88□□□□□ -1.47
COMMD3-207ENST00000468469 NUP153P49790 1475 aaKnown RBP5.88□□□□□ -1.47
COMMD3-207ENST00000468469 PCF11O94913 1555 aaKnown RBP5.88□□□□□ -1.47
COMMD3-207ENST00000468469 TRHP20396 242 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-207ENST00000468469 NCBP3Q53F19 620 aaKnown RBP5.87□□□□□ -1.47
COMMD3-207ENST00000468469 ABCC10Q5T3U5 1492 aa5.87□□□□□ -1.47
COMMD3-207ENST00000468469 WDR7Q9Y4E6 1490 aa5.87□□□□□ -1.47
COMMD3-207ENST00000468469 KIF13AQ9H1H9 1805 aa5.85□□□□□ -1.47
COMMD3-207ENST00000468469 CDK13Q14004 1512 aaKnown RBP5.85□□□□□ -1.47
COMMD3-207ENST00000468469 FYCO1Q9BQS8 1478 aa5.85□□□□□ -1.47
COMMD3-207ENST00000468469 ARID3CA6NKF2 412 aa5.85□□□□□ -1.47
COMMD3-207ENST00000468469 GLI2P10070 1586 aa5.84□□□□□ -1.47
COMMD3-207ENST00000468469 EPRSP07814 1512 aaKnown RBP5.84□□□□□ -1.47
COMMD3-207ENST00000468469 ATP10BO94823 1461 aa5.84□□□□□ -1.47
COMMD3-207ENST00000468469 CCDC18Q5T9S5 1454 aa5.83□□□□□ -1.48
COMMD3-207ENST00000468469 CASKIN1Q8WXD9 1431 aa5.83□□□□□ -1.48
COMMD3-207ENST00000468469 NPM3O75607 178 aaKnown RBP5.83□□□□□ -1.48
COMMD3-207ENST00000468469 MAP3K4Q9Y6R4 1608 aa5.83□□□□□ -1.48
COMMD3-207ENST00000468469 LOC105371045A0A1W2PR82 267 aa5.82□□□□□ -1.48
COMMD3-207ENST00000468469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.82□□□□□ -1.48
COMMD3-207ENST00000468469 FAM69CQ0P6D2 419 aa5.82□□□□□ -1.48
COMMD3-207ENST00000468469 HNRNPUL2Q1KMD3 747 aaKnown RBP5.82□□□□□ -1.48
COMMD3-207ENST00000468469 LRRIQ1Q96JM4 1722 aa5.82□□□□□ -1.48
COMMD3-207ENST00000468469 CFAP43Q8NDM7 1665 aa5.82□□□□□ -1.48
COMMD3-207ENST00000468469 KIF14Q15058 1648 aa5.81□□□□□ -1.48
COMMD3-207ENST00000468469 ATP1B4Q9UN42 357 aaPredicted RBP5.81□□□□□ -1.48
COMMD3-207ENST00000468469 PPRC1Q5VV67 1664 aaKnown RBP5.81□□□□□ -1.48
COMMD3-207ENST00000468469 VPS8Q8N3P4 1428 aa5.81□□□□□ -1.48
COMMD3-207ENST00000468469 ABCA9Q8IUA7 1624 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms