RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
NOD1-207ENST00000467706 FBLN2P98095 1184 aa19.42■□□□□ 0.7
NOD1-207ENST00000467706 CHD1O14646 1710 aa19.39■□□□□ 0.69
NOD1-207ENST00000467706 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
NOD1-207ENST00000467706 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
NOD1-207ENST00000467706 KIAA0586Q9BVV6 1533 aa19.35■□□□□ 0.69
NOD1-207ENST00000467706 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
NOD1-207ENST00000467706 NUP160Q12769 1436 aa19.35■□□□□ 0.69
NOD1-207ENST00000467706 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
NOD1-207ENST00000467706 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
NOD1-207ENST00000467706 SAMD9Q5K651 1589 aa19.29■□□□□ 0.68
NOD1-207ENST00000467706 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
NOD1-207ENST00000467706 UGGT2Q9NYU1 1516 aa19.27■□□□□ 0.68
NOD1-207ENST00000467706 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
NOD1-207ENST00000467706 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
NOD1-207ENST00000467706 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
NOD1-207ENST00000467706 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
NOD1-207ENST00000467706 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
NOD1-207ENST00000467706 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
NOD1-207ENST00000467706 JPH4Q96JJ6 628 aa19.15■□□□□ 0.66
NOD1-207ENST00000467706 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
NOD1-207ENST00000467706 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
NOD1-207ENST00000467706 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
NOD1-207ENST00000467706 APLP2Q06481 763 aa19.1■□□□□ 0.65
NOD1-207ENST00000467706 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
NOD1-207ENST00000467706 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.65
NOD1-207ENST00000467706 PRG4Q92954 1404 aaPredicted RBP19.08■□□□□ 0.65
NOD1-207ENST00000467706 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
NOD1-207ENST00000467706 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
NOD1-207ENST00000467706 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
NOD1-207ENST00000467706 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
NOD1-207ENST00000467706 HECW1Q76N89 1606 aa19■□□□□ 0.63
NOD1-207ENST00000467706 TIAM1Q13009 1591 aa19■□□□□ 0.63
NOD1-207ENST00000467706 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
NOD1-207ENST00000467706 MAP3K1Q13233 1512 aa19■□□□□ 0.63
NOD1-207ENST00000467706 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
NOD1-207ENST00000467706 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
NOD1-207ENST00000467706 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
NOD1-207ENST00000467706 PTPRGP23470 1445 aa18.94■□□□□ 0.62
NOD1-207ENST00000467706 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
NOD1-207ENST00000467706 PLB1Q6P1J6 1458 aa18.92■□□□□ 0.62
NOD1-207ENST00000467706 ABCA8O94911 1581 aa18.91■□□□□ 0.62
NOD1-207ENST00000467706 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
NOD1-207ENST00000467706 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
NOD1-207ENST00000467706 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
NOD1-207ENST00000467706 LRRC9Q6ZRR7 1453 aa18.89■□□□□ 0.61
NOD1-207ENST00000467706 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
NOD1-207ENST00000467706 CDK13Q14004 1512 aaKnown RBP18.86■□□□□ 0.61
NOD1-207ENST00000467706 UACAQ9BZF9 1416 aa18.83■□□□□ 0.61
NOD1-207ENST00000467706 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
NOD1-207ENST00000467706 EHBP1L1Q8N3D4 1523 aa18.82■□□□□ 0.6
NOD1-207ENST00000467706 MTUS2Q5JR59 1369 aa18.81■□□□□ 0.6
NOD1-207ENST00000467706 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
NOD1-207ENST00000467706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
NOD1-207ENST00000467706 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
NOD1-207ENST00000467706 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
NOD1-207ENST00000467706 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
NOD1-207ENST00000467706 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.59
NOD1-207ENST00000467706 CDK11AQ9UQ88 783 aaPredicted RBP18.76■□□□□ 0.59
NOD1-207ENST00000467706 ATP10BO94823 1461 aa18.76■□□□□ 0.59
NOD1-207ENST00000467706 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
NOD1-207ENST00000467706 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
NOD1-207ENST00000467706 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
NOD1-207ENST00000467706 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
NOD1-207ENST00000467706 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
NOD1-207ENST00000467706 PHLDB1Q86UU1 1377 aa18.68■□□□□ 0.58
NOD1-207ENST00000467706 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
NOD1-207ENST00000467706 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
NOD1-207ENST00000467706 ZCCHC11Q5TAX3 1644 aaKnown RBP18.68■□□□□ 0.58
NOD1-207ENST00000467706 RIMBP3Q9UFD9 1639 aa18.68■□□□□ 0.58
NOD1-207ENST00000467706 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
NOD1-207ENST00000467706 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
NOD1-207ENST00000467706 PLEKHD1A6NEE1 506 aa18.66■□□□□ 0.58
NOD1-207ENST00000467706 KIF14Q15058 1648 aa18.63■□□□□ 0.57
NOD1-207ENST00000467706 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
NOD1-207ENST00000467706 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
NOD1-207ENST00000467706 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
NOD1-207ENST00000467706 ITSN2Q9NZM3 1697 aa18.56■□□□□ 0.56
NOD1-207ENST00000467706 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
NOD1-207ENST00000467706 ABCC10Q5T3U5 1492 aa18.54■□□□□ 0.56
NOD1-207ENST00000467706 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
NOD1-207ENST00000467706 PTPN23Q9H3S7 1636 aa18.53■□□□□ 0.56
NOD1-207ENST00000467706 FAM50AQ14320 339 aaKnown RBP18.53■□□□□ 0.56
NOD1-207ENST00000467706 MIA2Q96PC5 1412 aa18.53■□□□□ 0.56
NOD1-207ENST00000467706 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
NOD1-207ENST00000467706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.52■□□□□ 0.55
NOD1-207ENST00000467706 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
NOD1-207ENST00000467706 ASXL2Q76L83 1435 aa18.49■□□□□ 0.55
NOD1-207ENST00000467706 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
NOD1-207ENST00000467706 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
NOD1-207ENST00000467706 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
NOD1-207ENST00000467706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
NOD1-207ENST00000467706 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
NOD1-207ENST00000467706 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
NOD1-207ENST00000467706 ITGAEP38570 1179 aa18.45■□□□□ 0.54
NOD1-207ENST00000467706 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
NOD1-207ENST00000467706 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
NOD1-207ENST00000467706 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
NOD1-207ENST00000467706 MAPKBP1O60336 1514 aa18.42■□□□□ 0.54
NOD1-207ENST00000467706 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms