RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 RIMBP3CA6NJZ7 1639 aa22.66■■□□□ 1.22
SSBP1-206ENST00000467681 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
SSBP1-206ENST00000467681 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
SSBP1-206ENST00000467681 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
SSBP1-206ENST00000467681 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
SSBP1-206ENST00000467681 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
SSBP1-206ENST00000467681 ARAP1Q96P48 1450 aa22.55■■□□□ 1.2
SSBP1-206ENST00000467681 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
SSBP1-206ENST00000467681 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
SSBP1-206ENST00000467681 IQGAP2Q13576 1575 aa22.42■■□□□ 1.18
SSBP1-206ENST00000467681 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
SSBP1-206ENST00000467681 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
SSBP1-206ENST00000467681 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
SSBP1-206ENST00000467681 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
SSBP1-206ENST00000467681 PTPRGP23470 1445 aa22.36■■□□□ 1.17
SSBP1-206ENST00000467681 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
SSBP1-206ENST00000467681 KIF21BO75037 1637 aa22.35■■□□□ 1.17
SSBP1-206ENST00000467681 DISP1Q96F81 1524 aa22.33■■□□□ 1.17
SSBP1-206ENST00000467681 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
SSBP1-206ENST00000467681 GOLGA3Q08378 1498 aa22.28■■□□□ 1.16
SSBP1-206ENST00000467681 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
SSBP1-206ENST00000467681 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
SSBP1-206ENST00000467681 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
SSBP1-206ENST00000467681 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
SSBP1-206ENST00000467681 KIAA0556O60303 1618 aa22.2■■□□□ 1.14
SSBP1-206ENST00000467681 UACAQ9BZF9 1416 aa22.17■■□□□ 1.14
SSBP1-206ENST00000467681 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
SSBP1-206ENST00000467681 UHRF1BP1LA0JNW5 1464 aa22.12■■□□□ 1.13
SSBP1-206ENST00000467681 ADCY10Q96PN6 1610 aa22.09■■□□□ 1.13
SSBP1-206ENST00000467681 SAMD9Q5K651 1589 aa22.08■■□□□ 1.13
SSBP1-206ENST00000467681 LOC105371045A0A1W2PR82 267 aa22.08■■□□□ 1.13
SSBP1-206ENST00000467681 PLB1Q6P1J6 1458 aa22.07■■□□□ 1.12
SSBP1-206ENST00000467681 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
SSBP1-206ENST00000467681 FHOD3Q2V2M9 1422 aa22.05■■□□□ 1.12
SSBP1-206ENST00000467681 EFCAB5A4FU69 1503 aa22.03■■□□□ 1.12
SSBP1-206ENST00000467681 ABCA8O94911 1581 aa22.01■■□□□ 1.11
SSBP1-206ENST00000467681 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
SSBP1-206ENST00000467681 KDM5BQ9UGL1 1544 aa22■■□□□ 1.11
SSBP1-206ENST00000467681 MAPKBP1O60336 1514 aa21.96■■□□□ 1.11
SSBP1-206ENST00000467681 FAM69CQ0P6D2 419 aa21.96■■□□□ 1.11
SSBP1-206ENST00000467681 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
SSBP1-206ENST00000467681 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
SSBP1-206ENST00000467681 CLIP1P30622 1438 aa21.93■■□□□ 1.1
SSBP1-206ENST00000467681 ATP10BO94823 1461 aa21.91■■□□□ 1.1
SSBP1-206ENST00000467681 ABCC10Q5T3U5 1492 aa21.91■■□□□ 1.1
SSBP1-206ENST00000467681 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
SSBP1-206ENST00000467681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.88■■□□□ 1.09
SSBP1-206ENST00000467681 HNRNPUL2Q1KMD3 747 aaKnown RBP21.88■■□□□ 1.09
SSBP1-206ENST00000467681 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
SSBP1-206ENST00000467681 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
SSBP1-206ENST00000467681 NUP153P49790 1475 aaKnown RBP21.85■■□□□ 1.09
SSBP1-206ENST00000467681 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
SSBP1-206ENST00000467681 ZCCHC11Q5TAX3 1644 aaKnown RBP21.84■■□□□ 1.09
SSBP1-206ENST00000467681 CEP162Q5TB80 1403 aa21.83■■□□□ 1.09
SSBP1-206ENST00000467681 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
SSBP1-206ENST00000467681 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
SSBP1-206ENST00000467681 EPRSP07814 1512 aaKnown RBP21.79■■□□□ 1.08
SSBP1-206ENST00000467681 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
SSBP1-206ENST00000467681 CASKIN1Q8WXD9 1431 aa21.76■■□□□ 1.07
SSBP1-206ENST00000467681 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
SSBP1-206ENST00000467681 GLI2P10070 1586 aa21.74■■□□□ 1.07
SSBP1-206ENST00000467681 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
SSBP1-206ENST00000467681 CDK13Q14004 1512 aaKnown RBP21.68■■□□□ 1.06
SSBP1-206ENST00000467681 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
SSBP1-206ENST00000467681 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
SSBP1-206ENST00000467681 FYCO1Q9BQS8 1478 aa21.64■■□□□ 1.05
SSBP1-206ENST00000467681 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
SSBP1-206ENST00000467681 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
SSBP1-206ENST00000467681 TSPOAP1O95153 1857 aa21.59■■□□□ 1.05
SSBP1-206ENST00000467681 TROQ12816 1431 aaPredicted RBP21.58■■□□□ 1.05
SSBP1-206ENST00000467681 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
SSBP1-206ENST00000467681 MAGI3Q5TCQ9 1506 aa21.57■■□□□ 1.04
SSBP1-206ENST00000467681 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
SSBP1-206ENST00000467681 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
SSBP1-206ENST00000467681 ABCA9Q8IUA7 1624 aa21.53■■□□□ 1.04
SSBP1-206ENST00000467681 PPRC1Q5VV67 1664 aaKnown RBP21.52■■□□□ 1.04
SSBP1-206ENST00000467681 CFAP43Q8NDM7 1665 aa21.52■■□□□ 1.04
SSBP1-206ENST00000467681 LRRIQ1Q96JM4 1722 aa21.52■■□□□ 1.03
SSBP1-206ENST00000467681 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
SSBP1-206ENST00000467681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.032e-6■□□□□ 8.3
SSBP1-206ENST00000467681 PHLDB1Q86UU1 1377 aa21.49■■□□□ 1.03
SSBP1-206ENST00000467681 COL17A1Q9UMD9 1497 aaPredicted RBP21.47■■□□□ 1.03
SSBP1-206ENST00000467681 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
SSBP1-206ENST00000467681 PLCH2O75038 1416 aa21.46■■□□□ 1.03
SSBP1-206ENST00000467681 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
SSBP1-206ENST00000467681 APLP2Q06481 763 aa21.42■■□□□ 1.02
SSBP1-206ENST00000467681 NEO1Q92859 1461 aa21.42■■□□□ 1.02
SSBP1-206ENST00000467681 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
SSBP1-206ENST00000467681 KDM6BO15054 1643 aa21.4■■□□□ 1.02
SSBP1-206ENST00000467681 KIF14Q15058 1648 aa21.4■■□□□ 1.02
SSBP1-206ENST00000467681 AKNAQ7Z591 1439 aa21.39■■□□□ 1.02
SSBP1-206ENST00000467681 KANK4Q5T7N3 995 aaPredicted RBP21.39■■□□□ 1.01
SSBP1-206ENST00000467681 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.01
SSBP1-206ENST00000467681 FANCAO15360 1455 aa21.38■■□□□ 1.01
SSBP1-206ENST00000467681 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
SSBP1-206ENST00000467681 MAP3K1Q13233 1512 aa21.37■■□□□ 1.01
SSBP1-206ENST00000467681 TIAM1Q13009 1591 aa21.34■■□□□ 1.01
SSBP1-206ENST00000467681 CCNB3Q8WWL7 1395 aa21.34■■□□□ 1.01
SSBP1-206ENST00000467681 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
SSBP1-206ENST00000467681 GPATCH8Q9UKJ3 1502 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms