RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-216ENST00000467134 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
MUC1-216ENST00000467134 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
MUC1-216ENST00000467134 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
MUC1-216ENST00000467134 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
MUC1-216ENST00000467134 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
MUC1-216ENST00000467134 KIAA0586Q9BVV6 1533 aa17.44■□□□□ 0.38
MUC1-216ENST00000467134 NUP160Q12769 1436 aa17.44■□□□□ 0.38
MUC1-216ENST00000467134 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
MUC1-216ENST00000467134 CHD1O14646 1710 aa17.41■□□□□ 0.38
MUC1-216ENST00000467134 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
MUC1-216ENST00000467134 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
MUC1-216ENST00000467134 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
MUC1-216ENST00000467134 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
MUC1-216ENST00000467134 KIAA0556O60303 1618 aa17.29■□□□□ 0.36
MUC1-216ENST00000467134 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
MUC1-216ENST00000467134 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
MUC1-216ENST00000467134 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
MUC1-216ENST00000467134 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
MUC1-216ENST00000467134 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
MUC1-216ENST00000467134 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
MUC1-216ENST00000467134 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
MUC1-216ENST00000467134 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
MUC1-216ENST00000467134 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.34
MUC1-216ENST00000467134 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
MUC1-216ENST00000467134 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
MUC1-216ENST00000467134 FBLN2P98095 1184 aa17.18■□□□□ 0.34
MUC1-216ENST00000467134 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
MUC1-216ENST00000467134 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.33
MUC1-216ENST00000467134 APLP2Q06481 763 aa17.14■□□□□ 0.33
MUC1-216ENST00000467134 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
MUC1-216ENST00000467134 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
MUC1-216ENST00000467134 RAPGEF6Q8TEU7 1601 aa17.12■□□□□ 0.33
MUC1-216ENST00000467134 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
MUC1-216ENST00000467134 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
MUC1-216ENST00000467134 ABCA8O94911 1581 aa17.07■□□□□ 0.32
MUC1-216ENST00000467134 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
MUC1-216ENST00000467134 PRG4Q92954 1404 aaPredicted RBP17.07■□□□□ 0.32
MUC1-216ENST00000467134 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
MUC1-216ENST00000467134 EHBP1L1Q8N3D4 1523 aa17.03■□□□□ 0.32
MUC1-216ENST00000467134 NUP153P49790 1475 aaKnown RBP17.01■□□□□ 0.31
MUC1-216ENST00000467134 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
MUC1-216ENST00000467134 PTPRGP23470 1445 aa16.96■□□□□ 0.31
MUC1-216ENST00000467134 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
MUC1-216ENST00000467134 UHRF1BP1LA0JNW5 1464 aa16.95■□□□□ 0.3
MUC1-216ENST00000467134 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
MUC1-216ENST00000467134 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
MUC1-216ENST00000467134 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
MUC1-216ENST00000467134 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
MUC1-216ENST00000467134 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
MUC1-216ENST00000467134 ADCY10Q96PN6 1610 aa16.94■□□□□ 0.3
MUC1-216ENST00000467134 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
MUC1-216ENST00000467134 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
MUC1-216ENST00000467134 UACAQ9BZF9 1416 aa16.92■□□□□ 0.3
MUC1-216ENST00000467134 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
MUC1-216ENST00000467134 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
MUC1-216ENST00000467134 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
MUC1-216ENST00000467134 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
MUC1-216ENST00000467134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
MUC1-216ENST00000467134 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
MUC1-216ENST00000467134 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
MUC1-216ENST00000467134 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
MUC1-216ENST00000467134 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
MUC1-216ENST00000467134 ATP10BO94823 1461 aa16.86■□□□□ 0.29
MUC1-216ENST00000467134 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
MUC1-216ENST00000467134 ITSN2Q9NZM3 1697 aa16.84■□□□□ 0.29
MUC1-216ENST00000467134 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
MUC1-216ENST00000467134 KIF14Q15058 1648 aa16.81■□□□□ 0.28
MUC1-216ENST00000467134 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
MUC1-216ENST00000467134 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
MUC1-216ENST00000467134 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
MUC1-216ENST00000467134 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
MUC1-216ENST00000467134 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
MUC1-216ENST00000467134 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
MUC1-216ENST00000467134 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
MUC1-216ENST00000467134 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
MUC1-216ENST00000467134 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
MUC1-216ENST00000467134 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
MUC1-216ENST00000467134 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.27
MUC1-216ENST00000467134 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
MUC1-216ENST00000467134 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
MUC1-216ENST00000467134 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
MUC1-216ENST00000467134 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
MUC1-216ENST00000467134 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
MUC1-216ENST00000467134 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
MUC1-216ENST00000467134 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
MUC1-216ENST00000467134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
MUC1-216ENST00000467134 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
MUC1-216ENST00000467134 DNMT1P26358 1616 aaKnown RBP16.64■□□□□ 0.25
MUC1-216ENST00000467134 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
MUC1-216ENST00000467134 CDC42BPBQ9Y5S2 1711 aa16.63■□□□□ 0.25
MUC1-216ENST00000467134 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
MUC1-216ENST00000467134 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.63■□□□□ 0.25
MUC1-216ENST00000467134 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
MUC1-216ENST00000467134 AKNAQ7Z591 1439 aa16.62■□□□□ 0.25
MUC1-216ENST00000467134 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
MUC1-216ENST00000467134 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
MUC1-216ENST00000467134 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
MUC1-216ENST00000467134 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
MUC1-216ENST00000467134 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
MUC1-216ENST00000467134 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms