RNA–Protein interactions for RNA: ENST00000466822.1

ABCD4-204, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-204ENST00000466822 EEA1Q15075 1411 aa24.15■■□□□ 1.46
ABCD4-204ENST00000466822 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
ABCD4-204ENST00000466822 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
ABCD4-204ENST00000466822 SHROOM2Q13796 1616 aa24.12■■□□□ 1.45
ABCD4-204ENST00000466822 CSRNP3Q8WYN3 585 aa24.1■■□□□ 1.45
ABCD4-204ENST00000466822 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
ABCD4-204ENST00000466822 PRXQ9BXM0 1461 aa24.05■■□□□ 1.44
ABCD4-204ENST00000466822 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
ABCD4-204ENST00000466822 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
ABCD4-204ENST00000466822 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
ABCD4-204ENST00000466822 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
ABCD4-204ENST00000466822 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
ABCD4-204ENST00000466822 PTPRGP23470 1445 aa23.85■■□□□ 1.41
ABCD4-204ENST00000466822 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
ABCD4-204ENST00000466822 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
ABCD4-204ENST00000466822 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
ABCD4-204ENST00000466822 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
ABCD4-204ENST00000466822 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
ABCD4-204ENST00000466822 CTTNBP2Q8WZ74 1663 aa23.75■■□□□ 1.39
ABCD4-204ENST00000466822 KIF21BO75037 1637 aa23.72■■□□□ 1.39
ABCD4-204ENST00000466822 KIAA0556O60303 1618 aa23.68■■□□□ 1.38
ABCD4-204ENST00000466822 UHRF1BP1LA0JNW5 1464 aa23.68■■□□□ 1.38
ABCD4-204ENST00000466822 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
ABCD4-204ENST00000466822 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
ABCD4-204ENST00000466822 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
ABCD4-204ENST00000466822 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
ABCD4-204ENST00000466822 ABCC2Q92887 1545 aa23.6■■□□□ 1.37
ABCD4-204ENST00000466822 MAPKBP1O60336 1514 aa23.59■■□□□ 1.37
ABCD4-204ENST00000466822 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
ABCD4-204ENST00000466822 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
ABCD4-204ENST00000466822 SAMD9Q5K651 1589 aa23.52■■□□□ 1.36
ABCD4-204ENST00000466822 ABCC10Q5T3U5 1492 aa23.51■■□□□ 1.35
ABCD4-204ENST00000466822 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
ABCD4-204ENST00000466822 EFCAB5A4FU69 1503 aa23.49■■□□□ 1.35
ABCD4-204ENST00000466822 FAM69CQ0P6D2 419 aa23.48■■□□□ 1.35
ABCD4-204ENST00000466822 ABCA8O94911 1581 aa23.46■■□□□ 1.35
ABCD4-204ENST00000466822 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
ABCD4-204ENST00000466822 RANGAP1P46060 587 aaPredicted RBP23.44■■□□□ 1.34
ABCD4-204ENST00000466822 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
ABCD4-204ENST00000466822 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
ABCD4-204ENST00000466822 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
ABCD4-204ENST00000466822 FMN1Q68DA7 1419 aa23.35■■□□□ 1.33
ABCD4-204ENST00000466822 ZCCHC11Q5TAX3 1644 aaKnown RBP23.33■■□□□ 1.33
ABCD4-204ENST00000466822 GLI2P10070 1586 aa23.33■■□□□ 1.33
ABCD4-204ENST00000466822 WDR7Q9Y4E6 1490 aa23.32■■□□□ 1.32
ABCD4-204ENST00000466822 ATP10BO94823 1461 aa23.31■■□□□ 1.32
ABCD4-204ENST00000466822 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
ABCD4-204ENST00000466822 KIF13AQ9H1H9 1805 aa23.31■■□□□ 1.32
ABCD4-204ENST00000466822 RAPGEF6Q8TEU7 1601 aa23.3■■□□□ 1.32
ABCD4-204ENST00000466822 EPRSP07814 1512 aaKnown RBP23.29■■□□□ 1.32
ABCD4-204ENST00000466822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
ABCD4-204ENST00000466822 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
ABCD4-204ENST00000466822 PLEKHD1A6NEE1 506 aa23.25■■□□□ 1.31
ABCD4-204ENST00000466822 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
ABCD4-204ENST00000466822 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
ABCD4-204ENST00000466822 CLIP1P30622 1438 aa23.21■■□□□ 1.31
ABCD4-204ENST00000466822 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
ABCD4-204ENST00000466822 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
ABCD4-204ENST00000466822 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
ABCD4-204ENST00000466822 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
ABCD4-204ENST00000466822 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
ABCD4-204ENST00000466822 MAGI3Q5TCQ9 1506 aa23.12■■□□□ 1.29
ABCD4-204ENST00000466822 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
ABCD4-204ENST00000466822 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
ABCD4-204ENST00000466822 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
ABCD4-204ENST00000466822 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
ABCD4-204ENST00000466822 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
ABCD4-204ENST00000466822 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
ABCD4-204ENST00000466822 CEP162Q5TB80 1403 aa23.06■■□□□ 1.28
ABCD4-204ENST00000466822 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
ABCD4-204ENST00000466822 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
ABCD4-204ENST00000466822 FYCO1Q9BQS8 1478 aa23.03■■□□□ 1.28
ABCD4-204ENST00000466822 ABCA9Q8IUA7 1624 aa23.02■■□□□ 1.28
ABCD4-204ENST00000466822 KDM6BO15054 1643 aa23■■□□□ 1.27
ABCD4-204ENST00000466822 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
ABCD4-204ENST00000466822 CDK13Q14004 1512 aaKnown RBP23■■□□□ 1.27
ABCD4-204ENST00000466822 TROQ12816 1431 aaPredicted RBP22.97■■□□□ 1.27
ABCD4-204ENST00000466822 NEO1Q92859 1461 aa22.96■■□□□ 1.27
ABCD4-204ENST00000466822 PCF11O94913 1555 aaKnown RBP22.93■■□□□ 1.26
ABCD4-204ENST00000466822 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
ABCD4-204ENST00000466822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.9■■□□□ 1.26
ABCD4-204ENST00000466822 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
ABCD4-204ENST00000466822 PLCH2O75038 1416 aa22.89■■□□□ 1.25
ABCD4-204ENST00000466822 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
ABCD4-204ENST00000466822 KIF14Q15058 1648 aa22.84■■□□□ 1.25
ABCD4-204ENST00000466822 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.25
ABCD4-204ENST00000466822 FANCAO15360 1455 aa22.83■■□□□ 1.25
ABCD4-204ENST00000466822 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
ABCD4-204ENST00000466822 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
ABCD4-204ENST00000466822 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
ABCD4-204ENST00000466822 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
ABCD4-204ENST00000466822 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
ABCD4-204ENST00000466822 DENND4BO75064 1496 aaPredicted RBP22.77■■□□□ 1.24
ABCD4-204ENST00000466822 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
ABCD4-204ENST00000466822 SCAPERQ9BY12 1400 aa22.71■■□□□ 1.23
ABCD4-204ENST00000466822 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
ABCD4-204ENST00000466822 APLP2Q06481 763 aa22.7■■□□□ 1.22
ABCD4-204ENST00000466822 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
ABCD4-204ENST00000466822 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.22
ABCD4-204ENST00000466822 ARHGAP5Q13017 1502 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms