RNA–Protein interactions for RNA: ENST00000466611.1

SDK1-204, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 2

Gene SDK1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-204ENST00000466611 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
SDK1-204ENST00000466611 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
SDK1-204ENST00000466611 SNAPC4Q5SXM2 1469 aa25.29■■□□□ 1.64
SDK1-204ENST00000466611 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
SDK1-204ENST00000466611 MAGI1Q96QZ7 1491 aaPredicted RBP25.25■■□□□ 1.63
SDK1-204ENST00000466611 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
SDK1-204ENST00000466611 CENPBP07199 599 aaPredicted RBP25.17■■□□□ 1.62
SDK1-204ENST00000466611 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
SDK1-204ENST00000466611 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.61
SDK1-204ENST00000466611 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
SDK1-204ENST00000466611 CLIP1P30622 1438 aa25.11■■□□□ 1.61
SDK1-204ENST00000466611 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
SDK1-204ENST00000466611 APLP2Q06481 763 aa25.09■■□□□ 1.61
SDK1-204ENST00000466611 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
SDK1-204ENST00000466611 CHD1O14646 1710 aa25.03■■□□□ 1.6
SDK1-204ENST00000466611 FBLN2P98095 1184 aa25.02■■□□□ 1.6
SDK1-204ENST00000466611 CTTNBP2Q8WZ74 1663 aa24.99■■□□□ 1.59
SDK1-204ENST00000466611 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
SDK1-204ENST00000466611 NUP160Q12769 1436 aa24.96■■□□□ 1.59
SDK1-204ENST00000466611 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
SDK1-204ENST00000466611 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
SDK1-204ENST00000466611 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.57
SDK1-204ENST00000466611 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
SDK1-204ENST00000466611 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
SDK1-204ENST00000466611 ARHGAP35Q9NRY4 1499 aa24.8■■□□□ 1.56
SDK1-204ENST00000466611 GTF3C3Q9Y5Q9 886 aa24.79■■□□□ 1.56
SDK1-204ENST00000466611 CLASP1Q7Z460 1538 aa24.79■■□□□ 1.56
SDK1-204ENST00000466611 UGGT2Q9NYU1 1516 aa24.77■■□□□ 1.56
SDK1-204ENST00000466611 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
SDK1-204ENST00000466611 SAMD9Q5K651 1589 aa24.73■■□□□ 1.55
SDK1-204ENST00000466611 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
SDK1-204ENST00000466611 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
SDK1-204ENST00000466611 JPH4Q96JJ6 628 aa24.69■■□□□ 1.54
SDK1-204ENST00000466611 OSCARQ8IYS5 282 aa24.68■■□□□ 1.54
SDK1-204ENST00000466611 DISP1Q96F81 1524 aa24.68■■□□□ 1.54
SDK1-204ENST00000466611 KIAA0556O60303 1618 aa24.64■■□□□ 1.53
SDK1-204ENST00000466611 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
SDK1-204ENST00000466611 FHOD3Q2V2M9 1422 aa24.62■■□□□ 1.53
SDK1-204ENST00000466611 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
SDK1-204ENST00000466611 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
SDK1-204ENST00000466611 ANP32EQ9BTT0 268 aa24.56■■□□□ 1.52
SDK1-204ENST00000466611 CARMIL2Q6F5E8 1435 aa24.55■■□□□ 1.52
SDK1-204ENST00000466611 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
SDK1-204ENST00000466611 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
SDK1-204ENST00000466611 PCF11O94913 1555 aaKnown RBP24.43■■□□□ 1.5
SDK1-204ENST00000466611 TIAM1Q13009 1591 aa24.41■■□□□ 1.5
SDK1-204ENST00000466611 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
SDK1-204ENST00000466611 CASKIN1Q8WXD9 1431 aa24.39■■□□□ 1.5
SDK1-204ENST00000466611 PTPRGP23470 1445 aa24.38■■□□□ 1.49
SDK1-204ENST00000466611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
SDK1-204ENST00000466611 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
SDK1-204ENST00000466611 PLB1Q6P1J6 1458 aa24.34■■□□□ 1.49
SDK1-204ENST00000466611 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
SDK1-204ENST00000466611 CFAP43Q8NDM7 1665 aa24.33■■□□□ 1.49
SDK1-204ENST00000466611 ABCA8O94911 1581 aa24.33■■□□□ 1.49
SDK1-204ENST00000466611 RAPGEF6Q8TEU7 1601 aa24.32■■□□□ 1.48
SDK1-204ENST00000466611 LRRIQ1Q96JM4 1722 aa24.29■■□□□ 1.48
SDK1-204ENST00000466611 LRRC9Q6ZRR7 1453 aa24.28■■□□□ 1.48
SDK1-204ENST00000466611 HECW1Q76N89 1606 aa24.28■■□□□ 1.48
SDK1-204ENST00000466611 NUP153P49790 1475 aaKnown RBP24.27■■□□□ 1.48
SDK1-204ENST00000466611 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
SDK1-204ENST00000466611 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
SDK1-204ENST00000466611 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.48
SDK1-204ENST00000466611 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.48
SDK1-204ENST00000466611 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.48
SDK1-204ENST00000466611 ATP1B4Q9UN42 357 aaPredicted RBP24.25■■□□□ 1.47
SDK1-204ENST00000466611 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
SDK1-204ENST00000466611 UACAQ9BZF9 1416 aa24.24■■□□□ 1.47
SDK1-204ENST00000466611 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
SDK1-204ENST00000466611 ABCC2Q92887 1545 aa24.2■■□□□ 1.47
SDK1-204ENST00000466611 UHRF1BP1LA0JNW5 1464 aa24.18■■□□□ 1.46
SDK1-204ENST00000466611 CDK13Q14004 1512 aaKnown RBP24.18■■□□□ 1.46
SDK1-204ENST00000466611 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
SDK1-204ENST00000466611 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
SDK1-204ENST00000466611 ADCY10Q96PN6 1610 aa24.16■■□□□ 1.46
SDK1-204ENST00000466611 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
SDK1-204ENST00000466611 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
SDK1-204ENST00000466611 ATP10BO94823 1461 aa24.13■■□□□ 1.45
SDK1-204ENST00000466611 PHLDB1Q86UU1 1377 aa24.12■■□□□ 1.45
SDK1-204ENST00000466611 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
SDK1-204ENST00000466611 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
SDK1-204ENST00000466611 ZCCHC11Q5TAX3 1644 aaKnown RBP24.05■■□□□ 1.44
SDK1-204ENST00000466611 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
SDK1-204ENST00000466611 CLSPNQ9HAW4 1339 aa24.02■■□□□ 1.44
SDK1-204ENST00000466611 EHBP1L1Q8N3D4 1523 aa24.01■■□□□ 1.43
SDK1-204ENST00000466611 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
SDK1-204ENST00000466611 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
SDK1-204ENST00000466611 TROQ12816 1431 aaPredicted RBP23.96■■□□□ 1.43
SDK1-204ENST00000466611 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
SDK1-204ENST00000466611 PLEKHD1A6NEE1 506 aa23.92■■□□□ 1.42
SDK1-204ENST00000466611 SUPT6HQ7KZ85 1726 aaKnown RBP23.92■■□□□ 1.42
SDK1-204ENST00000466611 ITGAEP38570 1179 aa23.91■■□□□ 1.42
SDK1-204ENST00000466611 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
SDK1-204ENST00000466611 KIF14Q15058 1648 aa23.9■■□□□ 1.42
SDK1-204ENST00000466611 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
SDK1-204ENST00000466611 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
SDK1-204ENST00000466611 FAM50AQ14320 339 aaKnown RBP23.87■■□□□ 1.41
SDK1-204ENST00000466611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.87■■□□□ 1.41
SDK1-204ENST00000466611 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
SDK1-204ENST00000466611 ASXL2Q76L83 1435 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms