RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SHROOM2Q13796 1616 aa16.07■□□□□ 0.16
SDCCAG3-208ENST00000466579 ARAP1Q96P48 1450 aa16.02■□□□□ 0.15
SDCCAG3-208ENST00000466579 KIAA0586Q9BVV6 1533 aa16.01■□□□□ 0.15
SDCCAG3-208ENST00000466579 RAPGEF2Q9Y4G8 1499 aa16.01■□□□□ 0.15
SDCCAG3-208ENST00000466579 PRXQ9BXM0 1461 aa16■□□□□ 0.15
SDCCAG3-208ENST00000466579 EEA1Q15075 1411 aa16■□□□□ 0.15
SDCCAG3-208ENST00000466579 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
SDCCAG3-208ENST00000466579 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
SDCCAG3-208ENST00000466579 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
SDCCAG3-208ENST00000466579 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
SDCCAG3-208ENST00000466579 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
SDCCAG3-208ENST00000466579 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
SDCCAG3-208ENST00000466579 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
SDCCAG3-208ENST00000466579 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
SDCCAG3-208ENST00000466579 KIF21BO75037 1637 aa15.83■□□□□ 0.13
SDCCAG3-208ENST00000466579 DISP1Q96F81 1524 aa15.81■□□□□ 0.12
SDCCAG3-208ENST00000466579 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
SDCCAG3-208ENST00000466579 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
SDCCAG3-208ENST00000466579 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
SDCCAG3-208ENST00000466579 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
SDCCAG3-208ENST00000466579 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
SDCCAG3-208ENST00000466579 PTPRGP23470 1445 aa15.73■□□□□ 0.11
SDCCAG3-208ENST00000466579 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
SDCCAG3-208ENST00000466579 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
SDCCAG3-208ENST00000466579 UHRF1BP1LA0JNW5 1464 aa15.68■□□□□ 0.1
SDCCAG3-208ENST00000466579 UACAQ9BZF9 1416 aa15.65■□□□□ 0.1
SDCCAG3-208ENST00000466579 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
SDCCAG3-208ENST00000466579 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
SDCCAG3-208ENST00000466579 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
SDCCAG3-208ENST00000466579 ABCA8O94911 1581 aa15.61■□□□□ 0.09
SDCCAG3-208ENST00000466579 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
SDCCAG3-208ENST00000466579 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.08
SDCCAG3-208ENST00000466579 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
SDCCAG3-208ENST00000466579 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
SDCCAG3-208ENST00000466579 TTBK1Q5TCY1 1321 aaPredicted RBP15.56■□□□□ 0.08
SDCCAG3-208ENST00000466579 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
SDCCAG3-208ENST00000466579 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
SDCCAG3-208ENST00000466579 ABCC10Q5T3U5 1492 aa15.53■□□□□ 0.08
SDCCAG3-208ENST00000466579 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
SDCCAG3-208ENST00000466579 P3H3Q8IVL6 736 aa15.53■□□□□ 0.08
SDCCAG3-208ENST00000466579 FHOD3Q2V2M9 1422 aa15.52■□□□□ 0.08
SDCCAG3-208ENST00000466579 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
SDCCAG3-208ENST00000466579 DIP2BQ9P265 1576 aa15.51■□□□□ 0.07
SDCCAG3-208ENST00000466579 FOXD1Q16676 465 aa15.51■□□□□ 0.07
SDCCAG3-208ENST00000466579 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
SDCCAG3-208ENST00000466579 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
SDCCAG3-208ENST00000466579 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
SDCCAG3-208ENST00000466579 GLI2P10070 1586 aa15.47■□□□□ 0.07
SDCCAG3-208ENST00000466579 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
SDCCAG3-208ENST00000466579 ATP10BO94823 1461 aa15.46■□□□□ 0.06
SDCCAG3-208ENST00000466579 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
SDCCAG3-208ENST00000466579 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
SDCCAG3-208ENST00000466579 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
SDCCAG3-208ENST00000466579 FAM69CQ0P6D2 419 aa15.43■□□□□ 0.06
SDCCAG3-208ENST00000466579 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
SDCCAG3-208ENST00000466579 CLIP1P30622 1438 aa15.4■□□□□ 0.06
SDCCAG3-208ENST00000466579 MAP3K4Q9Y6R4 1608 aa15.38■□□□□ 0.05
SDCCAG3-208ENST00000466579 HECW1Q76N89 1606 aa15.36■□□□□ 0.05
SDCCAG3-208ENST00000466579 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
SDCCAG3-208ENST00000466579 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
SDCCAG3-208ENST00000466579 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
SDCCAG3-208ENST00000466579 CFAP43Q8NDM7 1665 aa15.33■□□□□ 0.04
SDCCAG3-208ENST00000466579 TSPOAP1O95153 1857 aa15.32■□□□□ 0.04
SDCCAG3-208ENST00000466579 LOC105371045A0A1W2PR82 267 aa15.32■□□□□ 0.04
SDCCAG3-208ENST00000466579 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
SDCCAG3-208ENST00000466579 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
SDCCAG3-208ENST00000466579 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-208ENST00000466579 PCF11O94913 1555 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-208ENST00000466579 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
SDCCAG3-208ENST00000466579 FYCO1Q9BQS8 1478 aa15.3■□□□□ 0.04
SDCCAG3-208ENST00000466579 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
SDCCAG3-208ENST00000466579 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.04
SDCCAG3-208ENST00000466579 PLEKHD1A6NEE1 506 aa15.27■□□□□ 0.04
SDCCAG3-208ENST00000466579 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
SDCCAG3-208ENST00000466579 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
SDCCAG3-208ENST00000466579 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
SDCCAG3-208ENST00000466579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
SDCCAG3-208ENST00000466579 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
SDCCAG3-208ENST00000466579 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.22■□□□□ 0.03
SDCCAG3-208ENST00000466579 KDM6BO15054 1643 aa15.22■□□□□ 0.03
SDCCAG3-208ENST00000466579 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
SDCCAG3-208ENST00000466579 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
SDCCAG3-208ENST00000466579 ATP1B4Q9UN42 357 aaPredicted RBP15.2■□□□□ 0.02
SDCCAG3-208ENST00000466579 TTC37Q6PGP7 1564 aa15.19■□□□□ 0.02
SDCCAG3-208ENST00000466579 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
SDCCAG3-208ENST00000466579 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
SDCCAG3-208ENST00000466579 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
SDCCAG3-208ENST00000466579 NEO1Q92859 1461 aa15.17■□□□□ 0.02
SDCCAG3-208ENST00000466579 KIF14Q15058 1648 aa15.17■□□□□ 0.02
SDCCAG3-208ENST00000466579 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
SDCCAG3-208ENST00000466579 PLCH2O75038 1416 aa15.14■□□□□ 0.01
SDCCAG3-208ENST00000466579 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
SDCCAG3-208ENST00000466579 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
SDCCAG3-208ENST00000466579 FANCAO15360 1455 aa15.1■□□□□ 0.01
SDCCAG3-208ENST00000466579 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
SDCCAG3-208ENST00000466579 TIAM1Q13009 1591 aa15.09■□□□□ 0.01
SDCCAG3-208ENST00000466579 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
SDCCAG3-208ENST00000466579 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0.01
SDCCAG3-208ENST00000466579 PREX2Q70Z35 1606 aa15.07■□□□□ 0
SDCCAG3-208ENST00000466579 CDC42BPBQ9Y5S2 1711 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms