RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
SEC22A-202ENST00000466519 CADPSQ9ULU8 1353 aa11.8□□□□□ -0.52
SEC22A-202ENST00000466519 MROH2BQ7Z745 1585 aa11.79□□□□□ -0.52
SEC22A-202ENST00000466519 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
SEC22A-202ENST00000466519 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEC22A-202ENST00000466519 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
SEC22A-202ENST00000466519 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
SEC22A-202ENST00000466519 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.54
SEC22A-202ENST00000466519 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
SEC22A-202ENST00000466519 POTEHQ6S545 545 aa11.68□□□□□ -0.54
SEC22A-202ENST00000466519 WDR62O43379 1518 aa11.68□□□□□ -0.54
SEC22A-202ENST00000466519 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
SEC22A-202ENST00000466519 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
SEC22A-202ENST00000466519 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
SEC22A-202ENST00000466519 CFTRP13569 1480 aa11.58□□□□□ -0.56
SEC22A-202ENST00000466519 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
SEC22A-202ENST00000466519 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
SEC22A-202ENST00000466519 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
SEC22A-202ENST00000466519 WIZO95785 1651 aa11.56□□□□□ -0.56
SEC22A-202ENST00000466519 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
SEC22A-202ENST00000466519 MIER1Q8N108 512 aa11.51□□□□□ -0.57
SEC22A-202ENST00000466519 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
SEC22A-202ENST00000466519 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
SEC22A-202ENST00000466519 RSF1Q96T23 1441 aaPredicted RBP11.5□□□□□ -0.57
SEC22A-202ENST00000466519 FARP1Q9Y4F1 1045 aaPredicted RBP11.49□□□□□ -0.57
SEC22A-202ENST00000466519 ZBTB47Q9UFB7 747 aaPredicted RBP11.47□□□□□ -0.57
SEC22A-202ENST00000466519 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
SEC22A-202ENST00000466519 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
SEC22A-202ENST00000466519 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
SEC22A-202ENST00000466519 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
SEC22A-202ENST00000466519 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
SEC22A-202ENST00000466519 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
SEC22A-202ENST00000466519 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
SEC22A-202ENST00000466519 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
SEC22A-202ENST00000466519 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
SEC22A-202ENST00000466519 ARHGEF11O15085 1522 aa11.41□□□□□ -0.58
SEC22A-202ENST00000466519 HAX1O00165 279 aa11.38□□□□□ -0.59
SEC22A-202ENST00000466519 CCDC88BA6NC98 1476 aa11.37□□□□□ -0.59
SEC22A-202ENST00000466519 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
SEC22A-202ENST00000466519 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
SEC22A-202ENST00000466519 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
SEC22A-202ENST00000466519 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
SEC22A-202ENST00000466519 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
SEC22A-202ENST00000466519 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
SEC22A-202ENST00000466519 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
SEC22A-202ENST00000466519 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
SEC22A-202ENST00000466519 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SEC22A-202ENST00000466519 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
SEC22A-202ENST00000466519 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
SEC22A-202ENST00000466519 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
SEC22A-202ENST00000466519 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
SEC22A-202ENST00000466519 SOGA1O94964 1423 aa11.24□□□□□ -0.61
SEC22A-202ENST00000466519 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
SEC22A-202ENST00000466519 NUBP1P53384 320 aa11.23□□□□□ -0.61
SEC22A-202ENST00000466519 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
SEC22A-202ENST00000466519 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
SEC22A-202ENST00000466519 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
SEC22A-202ENST00000466519 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
SEC22A-202ENST00000466519 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
SEC22A-202ENST00000466519 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
SEC22A-202ENST00000466519 EVX2Q03828 476 aa11.19□□□□□ -0.62
SEC22A-202ENST00000466519 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
SEC22A-202ENST00000466519 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
SEC22A-202ENST00000466519 ZNF579Q8NAF0 562 aaKnown RBP11.18□□□□□ -0.62
SEC22A-202ENST00000466519 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
SEC22A-202ENST00000466519 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
SEC22A-202ENST00000466519 CHD1O14646 1710 aa11.17□□□□□ -0.62
SEC22A-202ENST00000466519 CLCN6P51797 869 aa11.15□□□□□ -0.62
SEC22A-202ENST00000466519 GSE1Q14687 1217 aa11.14□□□□□ -0.63
SEC22A-202ENST00000466519 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
SEC22A-202ENST00000466519 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
SEC22A-202ENST00000466519 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
SEC22A-202ENST00000466519 GRIN2BQ13224 1484 aa11.12□□□□□ -0.63
SEC22A-202ENST00000466519 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
SEC22A-202ENST00000466519 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
SEC22A-202ENST00000466519 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
SEC22A-202ENST00000466519 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
SEC22A-202ENST00000466519 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
SEC22A-202ENST00000466519 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
SEC22A-202ENST00000466519 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
SEC22A-202ENST00000466519 CUX1P39880 1505 aa11.07□□□□□ -0.64
SEC22A-202ENST00000466519 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
SEC22A-202ENST00000466519 GABBR2O75899 941 aa11.04□□□□□ -0.64
SEC22A-202ENST00000466519 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
SEC22A-202ENST00000466519 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
SEC22A-202ENST00000466519 ABCA10Q8WWZ4 1543 aa10.99□□□□□ -0.65
SEC22A-202ENST00000466519 MAP3K13O43283 966 aa10.97□□□□□ -0.65
SEC22A-202ENST00000466519 PYGBP11216 843 aa10.97□□□□□ -0.65
SEC22A-202ENST00000466519 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
SEC22A-202ENST00000466519 GRIN2AQ12879 1464 aa10.97□□□□□ -0.65
SEC22A-202ENST00000466519 ERCC6L2Q5T890 1561 aa10.96□□□□□ -0.65
SEC22A-202ENST00000466519 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
SEC22A-202ENST00000466519 NUP160Q12769 1436 aa10.95□□□□□ -0.66
SEC22A-202ENST00000466519 WRNQ14191 1432 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SEC22A-202ENST00000466519 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
SEC22A-202ENST00000466519 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
SEC22A-202ENST00000466519 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
SEC22A-202ENST00000466519 ABCA5Q8WWZ7 1642 aa10.92□□□□□ -0.66
SEC22A-202ENST00000466519 CEP170Q5SW79 1584 aa10.92□□□□□ -0.66
SEC22A-202ENST00000466519 JPH4Q96JJ6 628 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms