RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 CLIP1P30622 1438 aa19.35■□□□□ 0.69
VPS16-206ENST00000466415 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
VPS16-206ENST00000466415 CHD1O14646 1710 aa19.3■□□□□ 0.68
VPS16-206ENST00000466415 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
VPS16-206ENST00000466415 CEP170Q5SW79 1584 aa19.27■□□□□ 0.67
VPS16-206ENST00000466415 NUP160Q12769 1436 aa19.26■□□□□ 0.67
VPS16-206ENST00000466415 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
VPS16-206ENST00000466415 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
VPS16-206ENST00000466415 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
VPS16-206ENST00000466415 ARAP1Q96P48 1450 aa19.18■□□□□ 0.66
VPS16-206ENST00000466415 UGGT2Q9NYU1 1516 aa19.16■□□□□ 0.66
VPS16-206ENST00000466415 SAMD9Q5K651 1589 aa19.16■□□□□ 0.66
VPS16-206ENST00000466415 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
VPS16-206ENST00000466415 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
VPS16-206ENST00000466415 P3H3Q8IVL6 736 aa19.12■□□□□ 0.65
VPS16-206ENST00000466415 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
VPS16-206ENST00000466415 CLASP1Q7Z460 1538 aa19.08■□□□□ 0.64
VPS16-206ENST00000466415 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.64
VPS16-206ENST00000466415 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
VPS16-206ENST00000466415 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
VPS16-206ENST00000466415 DISP1Q96F81 1524 aa19.05■□□□□ 0.64
VPS16-206ENST00000466415 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
VPS16-206ENST00000466415 PRG4Q92954 1404 aaPredicted RBP19.01■□□□□ 0.63
VPS16-206ENST00000466415 APLP2Q06481 763 aa19■□□□□ 0.63
VPS16-206ENST00000466415 OSCARQ8IYS5 282 aa19■□□□□ 0.63
VPS16-206ENST00000466415 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
VPS16-206ENST00000466415 FYCO1Q9BQS8 1478 aa18.97■□□□□ 0.63
VPS16-206ENST00000466415 CASKIN1Q8WXD9 1431 aa18.95■□□□□ 0.62
VPS16-206ENST00000466415 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
VPS16-206ENST00000466415 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
VPS16-206ENST00000466415 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
VPS16-206ENST00000466415 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
VPS16-206ENST00000466415 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
VPS16-206ENST00000466415 PTPRGP23470 1445 aa18.87■□□□□ 0.61
VPS16-206ENST00000466415 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
VPS16-206ENST00000466415 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
VPS16-206ENST00000466415 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
VPS16-206ENST00000466415 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
VPS16-206ENST00000466415 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
VPS16-206ENST00000466415 PLB1Q6P1J6 1458 aa18.82■□□□□ 0.6
VPS16-206ENST00000466415 ABCA8O94911 1581 aa18.81■□□□□ 0.6
VPS16-206ENST00000466415 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
VPS16-206ENST00000466415 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
VPS16-206ENST00000466415 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.59
VPS16-206ENST00000466415 UACAQ9BZF9 1416 aa18.76■□□□□ 0.59
VPS16-206ENST00000466415 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
VPS16-206ENST00000466415 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
VPS16-206ENST00000466415 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
VPS16-206ENST00000466415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
VPS16-206ENST00000466415 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
VPS16-206ENST00000466415 ABCC2Q92887 1545 aa18.73■□□□□ 0.59
VPS16-206ENST00000466415 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
VPS16-206ENST00000466415 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
VPS16-206ENST00000466415 EHBP1L1Q8N3D4 1523 aa18.72■□□□□ 0.59
VPS16-206ENST00000466415 ARHGEF11O15085 1522 aa18.71■□□□□ 0.59
VPS16-206ENST00000466415 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
VPS16-206ENST00000466415 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
VPS16-206ENST00000466415 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
VPS16-206ENST00000466415 ATP10BO94823 1461 aa18.65■□□□□ 0.58
VPS16-206ENST00000466415 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
VPS16-206ENST00000466415 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
VPS16-206ENST00000466415 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
VPS16-206ENST00000466415 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
VPS16-206ENST00000466415 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
VPS16-206ENST00000466415 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
VPS16-206ENST00000466415 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
VPS16-206ENST00000466415 ZCCHC11Q5TAX3 1644 aaKnown RBP18.6■□□□□ 0.57
VPS16-206ENST00000466415 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
VPS16-206ENST00000466415 PLEKHD1A6NEE1 506 aa18.58■□□□□ 0.56
VPS16-206ENST00000466415 NCOA2Q15596 1464 aa18.58■□□□□ 0.56
VPS16-206ENST00000466415 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
VPS16-206ENST00000466415 KIF14Q15058 1648 aa18.56■□□□□ 0.56
VPS16-206ENST00000466415 PHLDB1Q86UU1 1377 aa18.54■□□□□ 0.56
VPS16-206ENST00000466415 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
VPS16-206ENST00000466415 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
VPS16-206ENST00000466415 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
VPS16-206ENST00000466415 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
VPS16-206ENST00000466415 CCNB3Q8WWL7 1395 aa18.48■□□□□ 0.55
VPS16-206ENST00000466415 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
VPS16-206ENST00000466415 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
VPS16-206ENST00000466415 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
VPS16-206ENST00000466415 ASXL2Q76L83 1435 aa18.42■□□□□ 0.54
VPS16-206ENST00000466415 MIA2Q96PC5 1412 aa18.41■□□□□ 0.54
VPS16-206ENST00000466415 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
VPS16-206ENST00000466415 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
VPS16-206ENST00000466415 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
VPS16-206ENST00000466415 PTPN23Q9H3S7 1636 aa18.4■□□□□ 0.54
VPS16-206ENST00000466415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
VPS16-206ENST00000466415 TTC37Q6PGP7 1564 aa18.38■□□□□ 0.53
VPS16-206ENST00000466415 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
VPS16-206ENST00000466415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.53
VPS16-206ENST00000466415 MAPKBP1O60336 1514 aa18.37■□□□□ 0.53
VPS16-206ENST00000466415 CDC42BPAQ5VT25 1732 aa18.36■□□□□ 0.53
VPS16-206ENST00000466415 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
VPS16-206ENST00000466415 PREX2Q70Z35 1606 aa18.35■□□□□ 0.53
VPS16-206ENST00000466415 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
VPS16-206ENST00000466415 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
VPS16-206ENST00000466415 ITGAEP38570 1179 aa18.33■□□□□ 0.52
VPS16-206ENST00000466415 ARHGAP5Q13017 1502 aa18.32■□□□□ 0.52
VPS16-206ENST00000466415 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms