RNA–Protein interactions for RNA: ENST00000466407.1

ATP2B4-206, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 3

Gene ATP2B4, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-206ENST00000466407 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
ATP2B4-206ENST00000466407 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
ATP2B4-206ENST00000466407 UBTFP17480 764 aaKnown RBP10.85□□□□□ -0.67
ATP2B4-206ENST00000466407 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
ATP2B4-206ENST00000466407 CEP170Q5SW79 1584 aa10.85□□□□□ -0.67
ATP2B4-206ENST00000466407 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
ATP2B4-206ENST00000466407 CLASP1Q7Z460 1538 aa10.83□□□□□ -0.68
ATP2B4-206ENST00000466407 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
ATP2B4-206ENST00000466407 CLIP1P30622 1438 aa10.8□□□□□ -0.68
ATP2B4-206ENST00000466407 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
ATP2B4-206ENST00000466407 KIAA0556O60303 1618 aa10.78□□□□□ -0.68
ATP2B4-206ENST00000466407 FMN1Q68DA7 1419 aa10.77□□□□□ -0.68
ATP2B4-206ENST00000466407 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
ATP2B4-206ENST00000466407 LOC105371045A0A1W2PR82 267 aa10.74□□□□□ -0.69
ATP2B4-206ENST00000466407 FBLN2P98095 1184 aa10.74□□□□□ -0.69
ATP2B4-206ENST00000466407 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
ATP2B4-206ENST00000466407 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
ATP2B4-206ENST00000466407 MAP3K1Q13233 1512 aa10.72□□□□□ -0.69
ATP2B4-206ENST00000466407 DISP1Q96F81 1524 aa10.72□□□□□ -0.69
ATP2B4-206ENST00000466407 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
ATP2B4-206ENST00000466407 FYCO1Q9BQS8 1478 aa10.71□□□□□ -0.69
ATP2B4-206ENST00000466407 HECW1Q76N89 1606 aa10.69□□□□□ -0.7
ATP2B4-206ENST00000466407 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
ATP2B4-206ENST00000466407 CCDC18Q5T9S5 1454 aa10.68□□□□□ -0.7
ATP2B4-206ENST00000466407 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
ATP2B4-206ENST00000466407 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
ATP2B4-206ENST00000466407 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
ATP2B4-206ENST00000466407 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
ATP2B4-206ENST00000466407 UHRF1BP1LA0JNW5 1464 aa10.63□□□□□ -0.71
ATP2B4-206ENST00000466407 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
ATP2B4-206ENST00000466407 ABCA8O94911 1581 aa10.63□□□□□ -0.71
ATP2B4-206ENST00000466407 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
ATP2B4-206ENST00000466407 PTPRGP23470 1445 aa10.61□□□□□ -0.71
ATP2B4-206ENST00000466407 ABCC2Q92887 1545 aa10.6□□□□□ -0.71
ATP2B4-206ENST00000466407 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
ATP2B4-206ENST00000466407 APLP2Q06481 763 aa10.59□□□□□ -0.71
ATP2B4-206ENST00000466407 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
ATP2B4-206ENST00000466407 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
ATP2B4-206ENST00000466407 EHMT2Q96KQ7 1210 aa10.58□□□□□ -0.72
ATP2B4-206ENST00000466407 EPRSP07814 1512 aaKnown RBP10.56□□□□□ -0.72
ATP2B4-206ENST00000466407 EHBP1L1Q8N3D4 1523 aa10.56□□□□□ -0.72
ATP2B4-206ENST00000466407 LRRIQ1Q96JM4 1722 aa10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 CDK11AQ9UQ88 783 aaPredicted RBP10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 NUP153P49790 1475 aaKnown RBP10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
ATP2B4-206ENST00000466407 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
ATP2B4-206ENST00000466407 SUPT6HQ7KZ85 1726 aaKnown RBP10.53□□□□□ -0.72
ATP2B4-206ENST00000466407 ERCC6L2Q5T890 1561 aa10.53□□□□□ -0.72
ATP2B4-206ENST00000466407 PLB1Q6P1J6 1458 aa10.52□□□□□ -0.73
ATP2B4-206ENST00000466407 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
ATP2B4-206ENST00000466407 ZCCHC11Q5TAX3 1644 aaKnown RBP10.51□□□□□ -0.73
ATP2B4-206ENST00000466407 ITSN2Q9NZM3 1697 aa10.5□□□□□ -0.73
ATP2B4-206ENST00000466407 RANGAP1P46060 587 aaPredicted RBP10.49□□□□□ -0.73
ATP2B4-206ENST00000466407 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
ATP2B4-206ENST00000466407 KIF14Q15058 1648 aa10.48□□□□□ -0.73
ATP2B4-206ENST00000466407 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
ATP2B4-206ENST00000466407 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
ATP2B4-206ENST00000466407 TROQ12816 1431 aaPredicted RBP10.48□□□□□ -0.73
ATP2B4-206ENST00000466407 ATP10BO94823 1461 aa10.47□□□□□ -0.73
ATP2B4-206ENST00000466407 ARAP3Q8WWN8 1544 aa10.46□□□□□ -0.74
ATP2B4-206ENST00000466407 CDK13Q14004 1512 aaKnown RBP10.44□□□□□ -0.74
ATP2B4-206ENST00000466407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
ATP2B4-206ENST00000466407 WDR7Q9Y4E6 1490 aa10.43□□□□□ -0.74
ATP2B4-206ENST00000466407 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
ATP2B4-206ENST00000466407 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
ATP2B4-206ENST00000466407 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
ATP2B4-206ENST00000466407 MYO5CQ9NQX4 1742 aa10.42□□□□□ -0.74
ATP2B4-206ENST00000466407 ABCA9Q8IUA7 1624 aa10.41□□□□□ -0.74
ATP2B4-206ENST00000466407 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
ATP2B4-206ENST00000466407 GLI2P10070 1586 aa10.4□□□□□ -0.74
ATP2B4-206ENST00000466407 NCOA2Q15596 1464 aa10.4□□□□□ -0.74
ATP2B4-206ENST00000466407 PREX2Q70Z35 1606 aa10.4□□□□□ -0.75
ATP2B4-206ENST00000466407 MAGI3Q5TCQ9 1506 aa10.39□□□□□ -0.75
ATP2B4-206ENST00000466407 CDC42BPAQ5VT25 1732 aa10.39□□□□□ -0.75
ATP2B4-206ENST00000466407 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
ATP2B4-206ENST00000466407 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
ATP2B4-206ENST00000466407 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
ATP2B4-206ENST00000466407 PLEKHH2Q8IVE3 1493 aa10.37□□□□□ -0.75
ATP2B4-206ENST00000466407 ASXL2Q76L83 1435 aa10.37□□□□□ -0.75
ATP2B4-206ENST00000466407 ABCC10Q5T3U5 1492 aa10.36□□□□□ -0.75
ATP2B4-206ENST00000466407 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
ATP2B4-206ENST00000466407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
ATP2B4-206ENST00000466407 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
ATP2B4-206ENST00000466407 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
ATP2B4-206ENST00000466407 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 FGD6Q6ZV73 1430 aa10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 PHLDB1Q86UU1 1377 aa10.34□□□□□ -0.75
ATP2B4-206ENST00000466407 PTPN23Q9H3S7 1636 aa10.33□□□□□ -0.76
ATP2B4-206ENST00000466407 MAP3K4Q9Y6R4 1608 aa10.33□□□□□ -0.76
ATP2B4-206ENST00000466407 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
ATP2B4-206ENST00000466407 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
ATP2B4-206ENST00000466407 TTC37Q6PGP7 1564 aa10.32□□□□□ -0.76
ATP2B4-206ENST00000466407 DIP2BQ9P265 1576 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms