RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
SMTN-214ENST00000466272 SHROOM2Q13796 1616 aa18.38■□□□□ 0.53
SMTN-214ENST00000466272 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
SMTN-214ENST00000466272 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
SMTN-214ENST00000466272 CSRNP3Q8WYN3 585 aa18.34■□□□□ 0.53
SMTN-214ENST00000466272 KIF21BO75037 1637 aa18.34■□□□□ 0.53
SMTN-214ENST00000466272 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
SMTN-214ENST00000466272 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
SMTN-214ENST00000466272 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
SMTN-214ENST00000466272 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
SMTN-214ENST00000466272 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
SMTN-214ENST00000466272 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
SMTN-214ENST00000466272 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
SMTN-214ENST00000466272 UGGT2Q9NYU1 1516 aa18.19■□□□□ 0.5
SMTN-214ENST00000466272 DISP1Q96F81 1524 aa18.17■□□□□ 0.5
SMTN-214ENST00000466272 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
SMTN-214ENST00000466272 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
SMTN-214ENST00000466272 SAMD9Q5K651 1589 aa18.1■□□□□ 0.49
SMTN-214ENST00000466272 CARMIL2Q6F5E8 1435 aa18.07■□□□□ 0.48
SMTN-214ENST00000466272 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
SMTN-214ENST00000466272 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
SMTN-214ENST00000466272 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
SMTN-214ENST00000466272 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
SMTN-214ENST00000466272 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
SMTN-214ENST00000466272 PTPRGP23470 1445 aa17.99■□□□□ 0.47
SMTN-214ENST00000466272 EFCAB5A4FU69 1503 aa17.99■□□□□ 0.47
SMTN-214ENST00000466272 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
SMTN-214ENST00000466272 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
SMTN-214ENST00000466272 ARHGAP35Q9NRY4 1499 aa17.95■□□□□ 0.46
SMTN-214ENST00000466272 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
SMTN-214ENST00000466272 PLB1Q6P1J6 1458 aa17.93■□□□□ 0.46
SMTN-214ENST00000466272 ABCA8O94911 1581 aa17.92■□□□□ 0.46
SMTN-214ENST00000466272 UACAQ9BZF9 1416 aa17.9■□□□□ 0.46
SMTN-214ENST00000466272 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
SMTN-214ENST00000466272 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
SMTN-214ENST00000466272 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
SMTN-214ENST00000466272 ZCCHC11Q5TAX3 1644 aaKnown RBP17.87■□□□□ 0.45
SMTN-214ENST00000466272 CLIP1P30622 1438 aa17.86■□□□□ 0.45
SMTN-214ENST00000466272 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
SMTN-214ENST00000466272 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
SMTN-214ENST00000466272 KDM5BQ9UGL1 1544 aa17.82■□□□□ 0.44
SMTN-214ENST00000466272 PCF11O94913 1555 aaKnown RBP17.8■□□□□ 0.44
SMTN-214ENST00000466272 NUP153P49790 1475 aaKnown RBP17.8■□□□□ 0.44
SMTN-214ENST00000466272 KIF13AQ9H1H9 1805 aa17.78■□□□□ 0.44
SMTN-214ENST00000466272 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
SMTN-214ENST00000466272 ARID3CA6NKF2 412 aa17.77■□□□□ 0.44
SMTN-214ENST00000466272 HECW1Q76N89 1606 aa17.76■□□□□ 0.43
SMTN-214ENST00000466272 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
SMTN-214ENST00000466272 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
SMTN-214ENST00000466272 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
SMTN-214ENST00000466272 ASXL2Q76L83 1435 aa17.73■□□□□ 0.43
SMTN-214ENST00000466272 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMTN-214ENST00000466272 ATP10BO94823 1461 aa17.73■□□□□ 0.43
SMTN-214ENST00000466272 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
SMTN-214ENST00000466272 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
SMTN-214ENST00000466272 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
SMTN-214ENST00000466272 FYCO1Q9BQS8 1478 aa17.68■□□□□ 0.42
SMTN-214ENST00000466272 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
SMTN-214ENST00000466272 EPRSP07814 1512 aaKnown RBP17.67■□□□□ 0.42
SMTN-214ENST00000466272 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
SMTN-214ENST00000466272 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
SMTN-214ENST00000466272 GLI2P10070 1586 aa17.62■□□□□ 0.41
SMTN-214ENST00000466272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
SMTN-214ENST00000466272 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
SMTN-214ENST00000466272 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
SMTN-214ENST00000466272 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
SMTN-214ENST00000466272 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
SMTN-214ENST00000466272 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
SMTN-214ENST00000466272 FAM69CQ0P6D2 419 aa17.59■□□□□ 0.41
SMTN-214ENST00000466272 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.41
SMTN-214ENST00000466272 MAGI3Q5TCQ9 1506 aa17.58■□□□□ 0.41
SMTN-214ENST00000466272 KIF14Q15058 1648 aa17.57■□□□□ 0.4
SMTN-214ENST00000466272 ABCA9Q8IUA7 1624 aa17.55■□□□□ 0.4
SMTN-214ENST00000466272 TTC37Q6PGP7 1564 aa17.55■□□□□ 0.4
SMTN-214ENST00000466272 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
SMTN-214ENST00000466272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMTN-214ENST00000466272 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
SMTN-214ENST00000466272 TROQ12816 1431 aaPredicted RBP17.5■□□□□ 0.39
SMTN-214ENST00000466272 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
SMTN-214ENST00000466272 EHBP1L1Q8N3D4 1523 aa17.46■□□□□ 0.39
SMTN-214ENST00000466272 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
SMTN-214ENST00000466272 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
SMTN-214ENST00000466272 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
SMTN-214ENST00000466272 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
SMTN-214ENST00000466272 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
SMTN-214ENST00000466272 KDM6BO15054 1643 aa17.4■□□□□ 0.38
SMTN-214ENST00000466272 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
SMTN-214ENST00000466272 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
SMTN-214ENST00000466272 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
SMTN-214ENST00000466272 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
SMTN-214ENST00000466272 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
SMTN-214ENST00000466272 SUPT6HQ7KZ85 1726 aaKnown RBP17.37■□□□□ 0.37
SMTN-214ENST00000466272 CFAP74Q9C0B2 1584 aa17.36■□□□□ 0.37
SMTN-214ENST00000466272 COL17A1Q9UMD9 1497 aaPredicted RBP17.34■□□□□ 0.37
SMTN-214ENST00000466272 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
SMTN-214ENST00000466272 ARAP3Q8WWN8 1544 aa17.33■□□□□ 0.37
SMTN-214ENST00000466272 FANCAO15360 1455 aa17.33■□□□□ 0.37
SMTN-214ENST00000466272 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
SMTN-214ENST00000466272 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.36
SMTN-214ENST00000466272 NEO1Q92859 1461 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms