RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
VPS8-218ENST00000465818 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
VPS8-218ENST00000465818 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
VPS8-218ENST00000465818 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
VPS8-218ENST00000465818 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
VPS8-218ENST00000465818 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
VPS8-218ENST00000465818 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
VPS8-218ENST00000465818 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
VPS8-218ENST00000465818 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
VPS8-218ENST00000465818 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
VPS8-218ENST00000465818 RGL2O15211 777 aa13.06□□□□□ -0.32
VPS8-218ENST00000465818 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
VPS8-218ENST00000465818 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
VPS8-218ENST00000465818 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
VPS8-218ENST00000465818 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
VPS8-218ENST00000465818 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
VPS8-218ENST00000465818 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
VPS8-218ENST00000465818 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
VPS8-218ENST00000465818 DNMBPQ6XZF7 1577 aa13□□□□□ -0.33
VPS8-218ENST00000465818 CUX1P39880 1505 aa13□□□□□ -0.33
VPS8-218ENST00000465818 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
VPS8-218ENST00000465818 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
VPS8-218ENST00000465818 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
VPS8-218ENST00000465818 WDR62O43379 1518 aa12.98□□□□□ -0.33
VPS8-218ENST00000465818 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
VPS8-218ENST00000465818 WRNQ14191 1432 aaPredicted RBP eCLIP12.97□□□□□ -0.33
VPS8-218ENST00000465818 MIER1Q8N108 512 aa12.97□□□□□ -0.33
VPS8-218ENST00000465818 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
VPS8-218ENST00000465818 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
VPS8-218ENST00000465818 BCANQ96GW7 911 aa12.95□□□□□ -0.34
VPS8-218ENST00000465818 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
VPS8-218ENST00000465818 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
VPS8-218ENST00000465818 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
VPS8-218ENST00000465818 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
VPS8-218ENST00000465818 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
VPS8-218ENST00000465818 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
VPS8-218ENST00000465818 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
VPS8-218ENST00000465818 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
VPS8-218ENST00000465818 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
VPS8-218ENST00000465818 CUX2O14529 1486 aa12.82□□□□□ -0.36
VPS8-218ENST00000465818 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
VPS8-218ENST00000465818 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
VPS8-218ENST00000465818 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
VPS8-218ENST00000465818 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
VPS8-218ENST00000465818 IFT140Q96RY7 1462 aa12.78□□□□□ -0.36
VPS8-218ENST00000465818 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
VPS8-218ENST00000465818 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
VPS8-218ENST00000465818 SOGA1O94964 1423 aa12.76□□□□□ -0.37
VPS8-218ENST00000465818 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
VPS8-218ENST00000465818 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
VPS8-218ENST00000465818 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
VPS8-218ENST00000465818 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
VPS8-218ENST00000465818 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
VPS8-218ENST00000465818 NUBP1P53384 320 aa12.69□□□□□ -0.38
VPS8-218ENST00000465818 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
VPS8-218ENST00000465818 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
VPS8-218ENST00000465818 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
VPS8-218ENST00000465818 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
VPS8-218ENST00000465818 RUSC2Q8N2Y8 1516 aa12.67□□□□□ -0.38
VPS8-218ENST00000465818 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
VPS8-218ENST00000465818 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
VPS8-218ENST00000465818 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
VPS8-218ENST00000465818 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
VPS8-218ENST00000465818 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
VPS8-218ENST00000465818 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS8-218ENST00000465818 CUL7Q14999 1698 aa12.64□□□□□ -0.39
VPS8-218ENST00000465818 ADAMTS12P58397 1594 aa12.63□□□□□ -0.39
VPS8-218ENST00000465818 EEA1Q15075 1411 aa12.62□□□□□ -0.39
VPS8-218ENST00000465818 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
VPS8-218ENST00000465818 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
VPS8-218ENST00000465818 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
VPS8-218ENST00000465818 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
VPS8-218ENST00000465818 CHD1O14646 1710 aa12.57□□□□□ -0.4
VPS8-218ENST00000465818 GSE1Q14687 1217 aa12.57□□□□□ -0.4
VPS8-218ENST00000465818 KIF21BO75037 1637 aa12.56□□□□□ -0.4
VPS8-218ENST00000465818 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
VPS8-218ENST00000465818 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
VPS8-218ENST00000465818 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
VPS8-218ENST00000465818 IGF1RP08069 1367 aa12.53□□□□□ -0.4
VPS8-218ENST00000465818 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
VPS8-218ENST00000465818 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
VPS8-218ENST00000465818 PRXQ9BXM0 1461 aa12.52□□□□□ -0.41
VPS8-218ENST00000465818 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
VPS8-218ENST00000465818 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
VPS8-218ENST00000465818 SYNJ2O15056 1496 aa12.5□□□□□ -0.41
VPS8-218ENST00000465818 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
VPS8-218ENST00000465818 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
VPS8-218ENST00000465818 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
VPS8-218ENST00000465818 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
VPS8-218ENST00000465818 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
VPS8-218ENST00000465818 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
VPS8-218ENST00000465818 GOLGA3Q08378 1498 aa12.46□□□□□ -0.41
VPS8-218ENST00000465818 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
VPS8-218ENST00000465818 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
VPS8-218ENST00000465818 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms