RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
TNRC6A-205ENST00000464539 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
TNRC6A-205ENST00000464539 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
TNRC6A-205ENST00000464539 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
TNRC6A-205ENST00000464539 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
TNRC6A-205ENST00000464539 CUX1P39880 1505 aa17.08■□□□□ 0.32
TNRC6A-205ENST00000464539 ERCC6L2Q5T890 1561 aa17.05■□□□□ 0.32
TNRC6A-205ENST00000464539 MIER1Q8N108 512 aa17.01■□□□□ 0.31
TNRC6A-205ENST00000464539 YTHDC1Q96MU7 727 aaKnown RBP17.01■□□□□ 0.31
TNRC6A-205ENST00000464539 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
TNRC6A-205ENST00000464539 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
TNRC6A-205ENST00000464539 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
TNRC6A-205ENST00000464539 KIF13AQ9H1H9 1805 aa16.99■□□□□ 0.31
TNRC6A-205ENST00000464539 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
TNRC6A-205ENST00000464539 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
TNRC6A-205ENST00000464539 NUP160Q12769 1436 aa16.97■□□□□ 0.31
TNRC6A-205ENST00000464539 ILDR1Q86SU0 546 aaPredicted RBP16.97■□□□□ 0.31
TNRC6A-205ENST00000464539 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
TNRC6A-205ENST00000464539 SHROOM2Q13796 1616 aa16.95■□□□□ 0.3
TNRC6A-205ENST00000464539 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
TNRC6A-205ENST00000464539 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
TNRC6A-205ENST00000464539 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
TNRC6A-205ENST00000464539 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
TNRC6A-205ENST00000464539 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
TNRC6A-205ENST00000464539 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
TNRC6A-205ENST00000464539 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
TNRC6A-205ENST00000464539 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
TNRC6A-205ENST00000464539 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
TNRC6A-205ENST00000464539 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
TNRC6A-205ENST00000464539 MAPKBP1O60336 1514 aa16.84■□□□□ 0.29
TNRC6A-205ENST00000464539 KDM6BO15054 1643 aa16.83■□□□□ 0.29
TNRC6A-205ENST00000464539 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
TNRC6A-205ENST00000464539 DIP2BQ9P265 1576 aa16.82■□□□□ 0.28
TNRC6A-205ENST00000464539 TSHZ2Q9NRE2 1034 aa16.81■□□□□ 0.28
TNRC6A-205ENST00000464539 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
TNRC6A-205ENST00000464539 EEA1Q15075 1411 aa16.77■□□□□ 0.28
TNRC6A-205ENST00000464539 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
TNRC6A-205ENST00000464539 ADCY10Q96PN6 1610 aa16.72■□□□□ 0.27
TNRC6A-205ENST00000464539 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
TNRC6A-205ENST00000464539 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
TNRC6A-205ENST00000464539 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
TNRC6A-205ENST00000464539 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
TNRC6A-205ENST00000464539 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
TNRC6A-205ENST00000464539 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
TNRC6A-205ENST00000464539 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
TNRC6A-205ENST00000464539 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
TNRC6A-205ENST00000464539 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
TNRC6A-205ENST00000464539 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
TNRC6A-205ENST00000464539 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
TNRC6A-205ENST00000464539 GLI2P10070 1586 aa16.54■□□□□ 0.24
TNRC6A-205ENST00000464539 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.24
TNRC6A-205ENST00000464539 PTPRGP23470 1445 aa16.51■□□□□ 0.23
TNRC6A-205ENST00000464539 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
TNRC6A-205ENST00000464539 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
TNRC6A-205ENST00000464539 ASXL2Q76L83 1435 aa16.49■□□□□ 0.23
TNRC6A-205ENST00000464539 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
TNRC6A-205ENST00000464539 FBXO41Q8TF61 875 aa16.46■□□□□ 0.22
TNRC6A-205ENST00000464539 COL17A1Q9UMD9 1497 aaPredicted RBP16.45■□□□□ 0.22
TNRC6A-205ENST00000464539 TEX14Q8IWB6 1497 aa16.45■□□□□ 0.22
TNRC6A-205ENST00000464539 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
TNRC6A-205ENST00000464539 APLP2Q06481 763 aa16.44■□□□□ 0.22
TNRC6A-205ENST00000464539 CARMIL2Q6F5E8 1435 aa16.43■□□□□ 0.22
TNRC6A-205ENST00000464539 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
TNRC6A-205ENST00000464539 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
TNRC6A-205ENST00000464539 CUL7Q14999 1698 aa16.41■□□□□ 0.22
TNRC6A-205ENST00000464539 KIF21BO75037 1637 aa16.41■□□□□ 0.22
TNRC6A-205ENST00000464539 MAP3K4Q9Y6R4 1608 aa16.41■□□□□ 0.22
TNRC6A-205ENST00000464539 CLIP1P30622 1438 aa16.4■□□□□ 0.22
TNRC6A-205ENST00000464539 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
TNRC6A-205ENST00000464539 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
TNRC6A-205ENST00000464539 IGF1RP08069 1367 aa16.39■□□□□ 0.21
TNRC6A-205ENST00000464539 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
TNRC6A-205ENST00000464539 FKBP8Q14318 412 aa16.36■□□□□ 0.21
TNRC6A-205ENST00000464539 NEFLP07196 543 aa16.35■□□□□ 0.21
TNRC6A-205ENST00000464539 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
TNRC6A-205ENST00000464539 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
TNRC6A-205ENST00000464539 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
TNRC6A-205ENST00000464539 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
TNRC6A-205ENST00000464539 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
TNRC6A-205ENST00000464539 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
TNRC6A-205ENST00000464539 BCANQ96GW7 911 aa16.27■□□□□ 0.19
TNRC6A-205ENST00000464539 DISP1Q96F81 1524 aa16.26■□□□□ 0.19
TNRC6A-205ENST00000464539 WDR7Q9Y4E6 1490 aa16.25■□□□□ 0.19
TNRC6A-205ENST00000464539 MAGI3Q5TCQ9 1506 aa16.24■□□□□ 0.19
TNRC6A-205ENST00000464539 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
TNRC6A-205ENST00000464539 RRBP1Q9P2E9 1410 aaKnown RBP16.21■□□□□ 0.19
TNRC6A-205ENST00000464539 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
TNRC6A-205ENST00000464539 MSH5O43196 834 aa16.2■□□□□ 0.18
TNRC6A-205ENST00000464539 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
TNRC6A-205ENST00000464539 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
TNRC6A-205ENST00000464539 ERICH6Q7L0X2 663 aa16.19■□□□□ 0.18
TNRC6A-205ENST00000464539 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
TNRC6A-205ENST00000464539 LMTK3Q96Q04 1460 aa16.18■□□□□ 0.18
TNRC6A-205ENST00000464539 PTPRMP28827 1452 aa16.16■□□□□ 0.18
TNRC6A-205ENST00000464539 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
TNRC6A-205ENST00000464539 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
TNRC6A-205ENST00000464539 TIMELESSQ9UNS1 1208 aa16.15■□□□□ 0.18
TNRC6A-205ENST00000464539 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
TNRC6A-205ENST00000464539 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
TNRC6A-205ENST00000464539 ARAP3Q8WWN8 1544 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms