RNA–Protein interactions for RNA: ENST00000463083.1

SMIM29-204, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 1,487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-204ENST00000463083 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
SMIM29-204ENST00000463083 CTTNBP2Q8WZ74 1663 aa29.23■■■□□ 2.27
SMIM29-204ENST00000463083 KIAA0586Q9BVV6 1533 aa29.2■■■□□ 2.26
SMIM29-204ENST00000463083 TNIKQ9UKE5 1360 aa29.18■■■□□ 2.26
SMIM29-204ENST00000463083 RANGAP1P46060 587 aaPredicted RBP29.17■■■□□ 2.26
SMIM29-204ENST00000463083 IQGAP2Q13576 1575 aa29.14■■■□□ 2.26
SMIM29-204ENST00000463083 CLASP1Q7Z460 1538 aa29.12■■■□□ 2.25
SMIM29-204ENST00000463083 JPH4Q96JJ6 628 aa29.06■■■□□ 2.24
SMIM29-204ENST00000463083 UGGT2Q9NYU1 1516 aa28.98■■■□□ 2.23
SMIM29-204ENST00000463083 CEP162Q5TB80 1403 aa28.98■■■□□ 2.23
SMIM29-204ENST00000463083 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
SMIM29-204ENST00000463083 PRG4Q92954 1404 aaPredicted RBP28.95■■■□□ 2.22
SMIM29-204ENST00000463083 CLIP1P30622 1438 aa28.94■■■□□ 2.22
SMIM29-204ENST00000463083 P3H3Q8IVL6 736 aa28.91■■■□□ 2.22
SMIM29-204ENST00000463083 CARMIL2Q6F5E8 1435 aa28.89■■■□□ 2.21
SMIM29-204ENST00000463083 DISP1Q96F81 1524 aa28.88■■■□□ 2.21
SMIM29-204ENST00000463083 EFCAB5A4FU69 1503 aa28.87■■■□□ 2.21
SMIM29-204ENST00000463083 SAMD9Q5K651 1589 aa28.87■■■□□ 2.21
SMIM29-204ENST00000463083 ARHGAP35Q9NRY4 1499 aa28.86■■■□□ 2.21
SMIM29-204ENST00000463083 KIAA0556O60303 1618 aa28.85■■■□□ 2.21
SMIM29-204ENST00000463083 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
SMIM29-204ENST00000463083 TTBK1Q5TCY1 1321 aaPredicted RBP28.81■■■□□ 2.2
SMIM29-204ENST00000463083 FHOD3Q2V2M9 1422 aa28.8■■■□□ 2.2
SMIM29-204ENST00000463083 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
SMIM29-204ENST00000463083 ARAP1Q96P48 1450 aa28.74■■■□□ 2.19
SMIM29-204ENST00000463083 PTPRGP23470 1445 aa28.69■■■□□ 2.18
SMIM29-204ENST00000463083 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
SMIM29-204ENST00000463083 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
SMIM29-204ENST00000463083 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
SMIM29-204ENST00000463083 FMN1Q68DA7 1419 aa28.62■■■□□ 2.17
SMIM29-204ENST00000463083 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
SMIM29-204ENST00000463083 VPS8Q8N3P4 1428 aa28.56■■■□□ 2.16
SMIM29-204ENST00000463083 PLB1Q6P1J6 1458 aa28.54■■■□□ 2.16
SMIM29-204ENST00000463083 ATP1B4Q9UN42 357 aaPredicted RBP28.54■■■□□ 2.16
SMIM29-204ENST00000463083 CYB5RLQ6IPT4 315 aa28.53■■■□□ 2.16
SMIM29-204ENST00000463083 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
SMIM29-204ENST00000463083 PCF11O94913 1555 aaKnown RBP28.49■■■□□ 2.15
SMIM29-204ENST00000463083 RAPGEF6Q8TEU7 1601 aa28.49■■■□□ 2.15
SMIM29-204ENST00000463083 ABCA8O94911 1581 aa28.48■■■□□ 2.15
SMIM29-204ENST00000463083 CASKIN1Q8WXD9 1431 aa28.47■■■□□ 2.15
SMIM29-204ENST00000463083 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
SMIM29-204ENST00000463083 FYCO1Q9BQS8 1478 aa28.44■■■□□ 2.14
SMIM29-204ENST00000463083 ABCC2Q92887 1545 aa28.42■■■□□ 2.14
SMIM29-204ENST00000463083 HECW1Q76N89 1606 aa28.41■■■□□ 2.14
SMIM29-204ENST00000463083 NUP153P49790 1475 aaKnown RBP28.39■■■□□ 2.13
SMIM29-204ENST00000463083 ADCY10Q96PN6 1610 aa28.38■■■□□ 2.13
SMIM29-204ENST00000463083 UHRF1BP1LA0JNW5 1464 aa28.38■■■□□ 2.13
SMIM29-204ENST00000463083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
SMIM29-204ENST00000463083 HNRNPUL2Q1KMD3 747 aaKnown RBP28.34■■■□□ 2.13
SMIM29-204ENST00000463083 APLP2Q06481 763 aa28.34■■■□□ 2.13
SMIM29-204ENST00000463083 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
SMIM29-204ENST00000463083 LRRIQ1Q96JM4 1722 aa28.3■■■□□ 2.12
SMIM29-204ENST00000463083 CDK13Q14004 1512 aaKnown RBP28.29■■■□□ 2.12
SMIM29-204ENST00000463083 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
SMIM29-204ENST00000463083 ATP10BO94823 1461 aa28.28■■■□□ 2.12
SMIM29-204ENST00000463083 CCDC18Q5T9S5 1454 aa28.28■■■□□ 2.12
SMIM29-204ENST00000463083 KDM5BQ9UGL1 1544 aa28.26■■■□□ 2.11
SMIM29-204ENST00000463083 ZCCHC11Q5TAX3 1644 aaKnown RBP28.24■■■□□ 2.11
SMIM29-204ENST00000463083 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
SMIM29-204ENST00000463083 CFAP43Q8NDM7 1665 aa28.19■■■□□ 2.1
SMIM29-204ENST00000463083 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
SMIM29-204ENST00000463083 MAP3K1Q13233 1512 aa28.16■■■□□ 2.1
SMIM29-204ENST00000463083 PLEKHD1A6NEE1 506 aa28.15■■■□□ 2.1
SMIM29-204ENST00000463083 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
SMIM29-204ENST00000463083 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
SMIM29-204ENST00000463083 MTUS2Q5JR59 1369 aa28.11■■■□□ 2.09
SMIM29-204ENST00000463083 ASXL2Q76L83 1435 aa28.09■■■□□ 2.09
SMIM29-204ENST00000463083 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
SMIM29-204ENST00000463083 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.09
SMIM29-204ENST00000463083 TROQ12816 1431 aaPredicted RBP28.05■■■□□ 2.08
SMIM29-204ENST00000463083 WDR7Q9Y4E6 1490 aa28.04■■■□□ 2.08
SMIM29-204ENST00000463083 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
SMIM29-204ENST00000463083 MAPKBP1O60336 1514 aa28.04■■■□□ 2.08
SMIM29-204ENST00000463083 EHBP1L1Q8N3D4 1523 aa28.03■■■□□ 2.08
SMIM29-204ENST00000463083 KIF14Q15058 1648 aa27.94■■■□□ 2.06
SMIM29-204ENST00000463083 SUPT6HQ7KZ85 1726 aaKnown RBP27.93■■■□□ 2.06
SMIM29-204ENST00000463083 NCOA2Q15596 1464 aa27.89■■■□□ 2.06
SMIM29-204ENST00000463083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.85■■■□□ 2.05
SMIM29-204ENST00000463083 ABCC10Q5T3U5 1492 aa27.85■■■□□ 2.05
SMIM29-204ENST00000463083 FAM69CQ0P6D2 419 aa27.84■■■□□ 2.05
SMIM29-204ENST00000463083 TTC37Q6PGP7 1564 aa27.83■■■□□ 2.05
SMIM29-204ENST00000463083 CCNB3Q8WWL7 1395 aa27.82■■■□□ 2.04
SMIM29-204ENST00000463083 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
SMIM29-204ENST00000463083 PHLDB1Q86UU1 1377 aa27.79■■■□□ 2.04
SMIM29-204ENST00000463083 ABCA9Q8IUA7 1624 aa27.79■■■□□ 2.04
SMIM29-204ENST00000463083 GLI2P10070 1586 aa27.77■■■□□ 2.04
SMIM29-204ENST00000463083 TRHP20396 242 aaPredicted RBP27.76■■■□□ 2.03
SMIM29-204ENST00000463083 GPATCH8Q9UKJ3 1502 aaKnown RBP27.74■■■□□ 2.03
SMIM29-204ENST00000463083 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
SMIM29-204ENST00000463083 CD109Q6YHK3 1445 aa27.73■■■□□ 2.03
SMIM29-204ENST00000463083 MYO5CQ9NQX4 1742 aa27.73■■■□□ 2.03
SMIM29-204ENST00000463083 MYOM3Q5VTT5 1437 aa27.73■■■□□ 2.03
SMIM29-204ENST00000463083 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
SMIM29-204ENST00000463083 CFDP1Q9UEE9 299 aaPredicted RBP27.71■■■□□ 2.03
SMIM29-204ENST00000463083 ITSN2Q9NZM3 1697 aa27.71■■■□□ 2.03
SMIM29-204ENST00000463083 PLCH2O75038 1416 aa27.69■■■□□ 2.02
SMIM29-204ENST00000463083 MAP3K4Q9Y6R4 1608 aa27.69■■■□□ 2.02
SMIM29-204ENST00000463083 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
SMIM29-204ENST00000463083 ARHGAP5Q13017 1502 aa27.67■■■□□ 2.02
SMIM29-204ENST00000463083 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms