RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
TRAPPC10-205ENST00000461889 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
TRAPPC10-205ENST00000461889 MAPKBP1O60336 1514 aa13.83□□□□□ -0.2
TRAPPC10-205ENST00000461889 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.2
TRAPPC10-205ENST00000461889 CEP170Q5SW79 1584 aa13.81□□□□□ -0.2
TRAPPC10-205ENST00000461889 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
TRAPPC10-205ENST00000461889 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAPPC10-205ENST00000461889 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
TRAPPC10-205ENST00000461889 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC10-205ENST00000461889 NUP160Q12769 1436 aa13.7□□□□□ -0.22
TRAPPC10-205ENST00000461889 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
TRAPPC10-205ENST00000461889 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
TRAPPC10-205ENST00000461889 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
TRAPPC10-205ENST00000461889 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
TRAPPC10-205ENST00000461889 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
TRAPPC10-205ENST00000461889 PRG4Q92954 1404 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC10-205ENST00000461889 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
TRAPPC10-205ENST00000461889 ADCY10Q96PN6 1610 aa13.59□□□□□ -0.23
TRAPPC10-205ENST00000461889 COL17A1Q9UMD9 1497 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC10-205ENST00000461889 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
TRAPPC10-205ENST00000461889 CERKQ8TCT0 537 aa13.56□□□□□ -0.24
TRAPPC10-205ENST00000461889 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
TRAPPC10-205ENST00000461889 JPH4Q96JJ6 628 aa13.55□□□□□ -0.24
TRAPPC10-205ENST00000461889 GLI2P10070 1586 aa13.54□□□□□ -0.24
TRAPPC10-205ENST00000461889 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
TRAPPC10-205ENST00000461889 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
TRAPPC10-205ENST00000461889 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
TRAPPC10-205ENST00000461889 CUX1P39880 1505 aa13.49□□□□□ -0.25
TRAPPC10-205ENST00000461889 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TRAPPC10-205ENST00000461889 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
TRAPPC10-205ENST00000461889 PLB1Q6P1J6 1458 aa13.43□□□□□ -0.26
TRAPPC10-205ENST00000461889 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
TRAPPC10-205ENST00000461889 PTPRMP28827 1452 aa13.42□□□□□ -0.26
TRAPPC10-205ENST00000461889 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
TRAPPC10-205ENST00000461889 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
TRAPPC10-205ENST00000461889 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
TRAPPC10-205ENST00000461889 ADAMTSL3P82987 1691 aa13.35□□□□□ -0.27
TRAPPC10-205ENST00000461889 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
TRAPPC10-205ENST00000461889 EPRSP07814 1512 aaKnown RBP13.33□□□□□ -0.28
TRAPPC10-205ENST00000461889 KIAA0586Q9BVV6 1533 aa13.33□□□□□ -0.28
TRAPPC10-205ENST00000461889 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
TRAPPC10-205ENST00000461889 KIF21BO75037 1637 aa13.31□□□□□ -0.28
TRAPPC10-205ENST00000461889 PTPRGP23470 1445 aa13.28□□□□□ -0.28
TRAPPC10-205ENST00000461889 HSPA2P54652 639 aa13.27□□□□□ -0.29
TRAPPC10-205ENST00000461889 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
TRAPPC10-205ENST00000461889 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
TRAPPC10-205ENST00000461889 CUL7Q14999 1698 aa13.21□□□□□ -0.29
TRAPPC10-205ENST00000461889 MAGI3Q5TCQ9 1506 aa13.21□□□□□ -0.29
TRAPPC10-205ENST00000461889 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
TRAPPC10-205ENST00000461889 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
TRAPPC10-205ENST00000461889 BCORL1Q5H9F3 1711 aa13.18□□□□□ -0.3
TRAPPC10-205ENST00000461889 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
TRAPPC10-205ENST00000461889 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
TRAPPC10-205ENST00000461889 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
TRAPPC10-205ENST00000461889 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
TRAPPC10-205ENST00000461889 ARAP3Q8WWN8 1544 aa13.14□□□□□ -0.31
TRAPPC10-205ENST00000461889 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
TRAPPC10-205ENST00000461889 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
TRAPPC10-205ENST00000461889 CFAP43Q8NDM7 1665 aa13.1□□□□□ -0.31
TRAPPC10-205ENST00000461889 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
TRAPPC10-205ENST00000461889 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
TRAPPC10-205ENST00000461889 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
TRAPPC10-205ENST00000461889 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
TRAPPC10-205ENST00000461889 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-205ENST00000461889 TTBK1Q5TCY1 1321 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-205ENST00000461889 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC10-205ENST00000461889 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
TRAPPC10-205ENST00000461889 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
TRAPPC10-205ENST00000461889 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
TRAPPC10-205ENST00000461889 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC10-205ENST00000461889 PTPRTO14522 1441 aa13.03□□□□□ -0.32
TRAPPC10-205ENST00000461889 BIVM-ERCC5R4GMW8 1640 aa13.01□□□□□ -0.33
TRAPPC10-205ENST00000461889 PREX1Q8TCU6 1659 aa12.96□□□□□ -0.33
TRAPPC10-205ENST00000461889 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
TRAPPC10-205ENST00000461889 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
TRAPPC10-205ENST00000461889 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
TRAPPC10-205ENST00000461889 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
TRAPPC10-205ENST00000461889 DISP1Q96F81 1524 aa12.93□□□□□ -0.34
TRAPPC10-205ENST00000461889 UBAP1LF5GYI3 381 aa12.93□□□□□ -0.34
TRAPPC10-205ENST00000461889 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
TRAPPC10-205ENST00000461889 ARHGEF40Q8TER5 1519 aa12.91□□□□□ -0.34
TRAPPC10-205ENST00000461889 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.34
TRAPPC10-205ENST00000461889 IGF1RP08069 1367 aa12.9□□□□□ -0.34
TRAPPC10-205ENST00000461889 NEO1Q92859 1461 aa12.89□□□□□ -0.35
TRAPPC10-205ENST00000461889 FANCAO15360 1455 aa12.88□□□□□ -0.35
TRAPPC10-205ENST00000461889 IQGAP2Q13576 1575 aa12.88□□□□□ -0.35
TRAPPC10-205ENST00000461889 HSPA1LP34931 641 aa12.87□□□□□ -0.35
TRAPPC10-205ENST00000461889 POTEHQ6S545 545 aa12.86□□□□□ -0.35
TRAPPC10-205ENST00000461889 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
TRAPPC10-205ENST00000461889 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
TRAPPC10-205ENST00000461889 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
TRAPPC10-205ENST00000461889 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
TRAPPC10-205ENST00000461889 ABCA9Q8IUA7 1624 aa12.81□□□□□ -0.36
TRAPPC10-205ENST00000461889 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
TRAPPC10-205ENST00000461889 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
TRAPPC10-205ENST00000461889 ARHGEF12Q9NZN5 1544 aa12.79□□□□□ -0.36
TRAPPC10-205ENST00000461889 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
TRAPPC10-205ENST00000461889 CEBPAP49715 358 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC10-205ENST00000461889 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
TRAPPC10-205ENST00000461889 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms