RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
NPHP1-209ENST00000461707 UGGT2Q9NYU1 1516 aa11.71□□□□□ -0.53
NPHP1-209ENST00000461707 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
NPHP1-209ENST00000461707 EIF4G3O43432 1585 aaKnown RBP11.69□□□□□ -0.54
NPHP1-209ENST00000461707 FYCO1Q9BQS8 1478 aa11.68□□□□□ -0.54
NPHP1-209ENST00000461707 KDM5BQ9UGL1 1544 aa11.67□□□□□ -0.54
NPHP1-209ENST00000461707 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
NPHP1-209ENST00000461707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPHP1-209ENST00000461707 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
NPHP1-209ENST00000461707 POLR1AO95602 1720 aaPredicted RBP11.63□□□□□ -0.55
NPHP1-209ENST00000461707 MAPKBP1O60336 1514 aa11.62□□□□□ -0.55
NPHP1-209ENST00000461707 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
NPHP1-209ENST00000461707 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
NPHP1-209ENST00000461707 KIAA0556O60303 1618 aa11.6□□□□□ -0.55
NPHP1-209ENST00000461707 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
NPHP1-209ENST00000461707 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
NPHP1-209ENST00000461707 CEP170Q5SW79 1584 aa11.58□□□□□ -0.55
NPHP1-209ENST00000461707 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
NPHP1-209ENST00000461707 LRRC9Q6ZRR7 1453 aa11.58□□□□□ -0.56
NPHP1-209ENST00000461707 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
NPHP1-209ENST00000461707 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
NPHP1-209ENST00000461707 DENND4BO75064 1496 aaPredicted RBP11.56□□□□□ -0.56
NPHP1-209ENST00000461707 DISP1Q96F81 1524 aa11.56□□□□□ -0.56
NPHP1-209ENST00000461707 ADGBQ8N7X0 1667 aa11.52□□□□□ -0.56
NPHP1-209ENST00000461707 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.57
NPHP1-209ENST00000461707 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
NPHP1-209ENST00000461707 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
NPHP1-209ENST00000461707 ABCA8O94911 1581 aa11.5□□□□□ -0.57
NPHP1-209ENST00000461707 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
NPHP1-209ENST00000461707 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
NPHP1-209ENST00000461707 NUP160Q12769 1436 aa11.48□□□□□ -0.57
NPHP1-209ENST00000461707 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
NPHP1-209ENST00000461707 AKNAQ7Z591 1439 aa11.47□□□□□ -0.57
NPHP1-209ENST00000461707 DNMT1P26358 1616 aaKnown RBP11.46□□□□□ -0.57
NPHP1-209ENST00000461707 UBTFP17480 764 aaKnown RBP11.45□□□□□ -0.58
NPHP1-209ENST00000461707 RAPGEF6Q8TEU7 1601 aa11.45□□□□□ -0.58
NPHP1-209ENST00000461707 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
NPHP1-209ENST00000461707 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
NPHP1-209ENST00000461707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
NPHP1-209ENST00000461707 CLASP1Q7Z460 1538 aa11.44□□□□□ -0.58
NPHP1-209ENST00000461707 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
NPHP1-209ENST00000461707 CHD1O14646 1710 aa11.44□□□□□ -0.58
NPHP1-209ENST00000461707 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
NPHP1-209ENST00000461707 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
NPHP1-209ENST00000461707 KDM6BO15054 1643 aa11.41□□□□□ -0.58
NPHP1-209ENST00000461707 ITSN2Q9NZM3 1697 aa11.41□□□□□ -0.58
NPHP1-209ENST00000461707 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
NPHP1-209ENST00000461707 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.59
NPHP1-209ENST00000461707 CDC42BPBQ9Y5S2 1711 aa11.39□□□□□ -0.59
NPHP1-209ENST00000461707 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
NPHP1-209ENST00000461707 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
NPHP1-209ENST00000461707 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
NPHP1-209ENST00000461707 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
NPHP1-209ENST00000461707 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
NPHP1-209ENST00000461707 KIAA0586Q9BVV6 1533 aa11.36□□□□□ -0.59
NPHP1-209ENST00000461707 DHX57Q6P158 1386 aaKnown RBP11.36□□□□□ -0.59
NPHP1-209ENST00000461707 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
NPHP1-209ENST00000461707 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
NPHP1-209ENST00000461707 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
NPHP1-209ENST00000461707 PHLDB1Q86UU1 1377 aa11.34□□□□□ -0.59
NPHP1-209ENST00000461707 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
NPHP1-209ENST00000461707 ADGRL2O95490 1459 aa11.33□□□□□ -0.6
NPHP1-209ENST00000461707 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
NPHP1-209ENST00000461707 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
NPHP1-209ENST00000461707 EPRSP07814 1512 aaKnown RBP11.32□□□□□ -0.6
NPHP1-209ENST00000461707 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
NPHP1-209ENST00000461707 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
NPHP1-209ENST00000461707 E9PCH4 1651 aa11.3□□□□□ -0.6
NPHP1-209ENST00000461707 KIF14Q15058 1648 aa11.3□□□□□ -0.6
NPHP1-209ENST00000461707 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
NPHP1-209ENST00000461707 UNC13BO14795 1591 aa11.29□□□□□ -0.6
NPHP1-209ENST00000461707 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
NPHP1-209ENST00000461707 HFM1A2PYH4 1435 aa11.28□□□□□ -0.6
NPHP1-209ENST00000461707 MAGI2Q86UL8 1455 aa11.28□□□□□ -0.6
NPHP1-209ENST00000461707 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
NPHP1-209ENST00000461707 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
NPHP1-209ENST00000461707 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-209ENST00000461707 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
NPHP1-209ENST00000461707 LAMC1P11047 1609 aa11.26□□□□□ -0.61
NPHP1-209ENST00000461707 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
NPHP1-209ENST00000461707 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
NPHP1-209ENST00000461707 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
NPHP1-209ENST00000461707 SHANK2Q9UPX8 1470 aa11.24□□□□□ -0.61
NPHP1-209ENST00000461707 NCOA2Q15596 1464 aa11.24□□□□□ -0.61
NPHP1-209ENST00000461707 ARAP3Q8WWN8 1544 aa11.23□□□□□ -0.61
NPHP1-209ENST00000461707 FHOD3Q2V2M9 1422 aa11.23□□□□□ -0.61
NPHP1-209ENST00000461707 IFT172Q9UG01 1749 aa11.22□□□□□ -0.61
NPHP1-209ENST00000461707 CCNB3Q8WWL7 1395 aa11.22□□□□□ -0.61
NPHP1-209ENST00000461707 HNRNPUL2Q1KMD3 747 aaKnown RBP11.21□□□□□ -0.61
NPHP1-209ENST00000461707 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.62
NPHP1-209ENST00000461707 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
NPHP1-209ENST00000461707 RNF17Q9BXT8 1623 aaKnown RBP11.19□□□□□ -0.62
NPHP1-209ENST00000461707 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
NPHP1-209ENST00000461707 NAIPQ13075 1403 aa11.19□□□□□ -0.62
NPHP1-209ENST00000461707 SAMD9LQ8IVG5 1584 aa11.18□□□□□ -0.62
NPHP1-209ENST00000461707 VWDEQ8N2E2 1590 aa11.18□□□□□ -0.62
NPHP1-209ENST00000461707 PTPRGP23470 1445 aa11.18□□□□□ -0.62
NPHP1-209ENST00000461707 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
NPHP1-209ENST00000461707 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
NPHP1-209ENST00000461707 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms