RNA–Protein interactions for RNA: ENST00000461379.5

GAPVD1-210, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-210ENST00000461379 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
GAPVD1-210ENST00000461379 RIMBP3CA6NJZ7 1639 aa26.51■■□□□ 1.83
GAPVD1-210ENST00000461379 RIMBP3BA6NNM3 1639 aa26.51■■□□□ 1.83
GAPVD1-210ENST00000461379 RIMBP3Q9UFD9 1639 aa26.51■■□□□ 1.83
GAPVD1-210ENST00000461379 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
GAPVD1-210ENST00000461379 SHROOM2Q13796 1616 aa26.46■■□□□ 1.83
GAPVD1-210ENST00000461379 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
GAPVD1-210ENST00000461379 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
GAPVD1-210ENST00000461379 ERCC6L2Q5T890 1561 aa26.41■■□□□ 1.82
GAPVD1-210ENST00000461379 EHMT2Q96KQ7 1210 aa26.4■■□□□ 1.82
GAPVD1-210ENST00000461379 IQGAP2Q13576 1575 aa26.4■■□□□ 1.82
GAPVD1-210ENST00000461379 KIF21BO75037 1637 aa26.38■■□□□ 1.81
GAPVD1-210ENST00000461379 UBTFP17480 764 aaKnown RBP26.31■■□□□ 1.8
GAPVD1-210ENST00000461379 GOLGA3Q08378 1498 aa26.3■■□□□ 1.8
GAPVD1-210ENST00000461379 UGGT2Q9NYU1 1516 aa26.29■■□□□ 1.8
GAPVD1-210ENST00000461379 CARMIL2Q6F5E8 1435 aa26.29■■□□□ 1.8
GAPVD1-210ENST00000461379 CTTNBP2Q8WZ74 1663 aa26.25■■□□□ 1.79
GAPVD1-210ENST00000461379 DISP1Q96F81 1524 aa26.25■■□□□ 1.79
GAPVD1-210ENST00000461379 TNIKQ9UKE5 1360 aa26.2■■□□□ 1.79
GAPVD1-210ENST00000461379 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.79
GAPVD1-210ENST00000461379 RANGAP1P46060 587 aaPredicted RBP26.2■■□□□ 1.78
GAPVD1-210ENST00000461379 PTPRGP23470 1445 aa26.19■■□□□ 1.78
GAPVD1-210ENST00000461379 KIAA0556O60303 1618 aa26.14■■□□□ 1.78
GAPVD1-210ENST00000461379 P3H3Q8IVL6 736 aa26.14■■□□□ 1.78
GAPVD1-210ENST00000461379 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
GAPVD1-210ENST00000461379 SAMD9Q5K651 1589 aa26.03■■□□□ 1.76
GAPVD1-210ENST00000461379 UACAQ9BZF9 1416 aa26■■□□□ 1.75
GAPVD1-210ENST00000461379 FHOD3Q2V2M9 1422 aa25.98■■□□□ 1.75
GAPVD1-210ENST00000461379 EFCAB5A4FU69 1503 aa25.97■■□□□ 1.75
GAPVD1-210ENST00000461379 NPM1P06748 294 aaKnown RBP eCLIP25.95■■□□□ 1.74
GAPVD1-210ENST00000461379 PLB1Q6P1J6 1458 aa25.94■■□□□ 1.74
GAPVD1-210ENST00000461379 ARHGAP35Q9NRY4 1499 aa25.94■■□□□ 1.74
GAPVD1-210ENST00000461379 ADCY10Q96PN6 1610 aa25.94■■□□□ 1.74
GAPVD1-210ENST00000461379 UHRF1BP1LA0JNW5 1464 aa25.93■■□□□ 1.74
GAPVD1-210ENST00000461379 ABCC2Q92887 1545 aa25.9■■□□□ 1.74
GAPVD1-210ENST00000461379 CLIP1P30622 1438 aa25.88■■□□□ 1.73
GAPVD1-210ENST00000461379 ABCA8O94911 1581 aa25.86■■□□□ 1.73
GAPVD1-210ENST00000461379 TRHP20396 242 aaPredicted RBP25.81■■□□□ 1.72
GAPVD1-210ENST00000461379 KDM5BQ9UGL1 1544 aa25.81■■□□□ 1.72
GAPVD1-210ENST00000461379 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
GAPVD1-210ENST00000461379 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
GAPVD1-210ENST00000461379 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
GAPVD1-210ENST00000461379 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
GAPVD1-210ENST00000461379 RAPGEF6Q8TEU7 1601 aa25.73■■□□□ 1.71
GAPVD1-210ENST00000461379 NUP153P49790 1475 aaKnown RBP25.72■■□□□ 1.71
GAPVD1-210ENST00000461379 ASXL2Q76L83 1435 aa25.72■■□□□ 1.71
GAPVD1-210ENST00000461379 ATP10BO94823 1461 aa25.72■■□□□ 1.71
GAPVD1-210ENST00000461379 ATP1B4Q9UN42 357 aaPredicted RBP25.7■■□□□ 1.7
GAPVD1-210ENST00000461379 ZCCHC11Q5TAX3 1644 aaKnown RBP25.68■■□□□ 1.7
GAPVD1-210ENST00000461379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
GAPVD1-210ENST00000461379 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
GAPVD1-210ENST00000461379 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
GAPVD1-210ENST00000461379 FAM69CQ0P6D2 419 aa25.65■■□□□ 1.7
GAPVD1-210ENST00000461379 CASKIN1Q8WXD9 1431 aa25.62■■□□□ 1.69
GAPVD1-210ENST00000461379 WDR7Q9Y4E6 1490 aa25.6■■□□□ 1.69
GAPVD1-210ENST00000461379 KCNH8Q96L42 1107 aa25.58■■□□□ 1.69
GAPVD1-210ENST00000461379 EPRSP07814 1512 aaKnown RBP25.57■■□□□ 1.68
GAPVD1-210ENST00000461379 HECW1Q76N89 1606 aa25.56■■□□□ 1.68
GAPVD1-210ENST00000461379 CDK13Q14004 1512 aaKnown RBP25.55■■□□□ 1.68
GAPVD1-210ENST00000461379 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
GAPVD1-210ENST00000461379 PCF11O94913 1555 aaKnown RBP25.55■■□□□ 1.68
GAPVD1-210ENST00000461379 DIP2BQ9P265 1576 aa25.55■■□□□ 1.68
GAPVD1-210ENST00000461379 FYCO1Q9BQS8 1478 aa25.53■■□□□ 1.68
GAPVD1-210ENST00000461379 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
GAPVD1-210ENST00000461379 VPS8Q8N3P4 1428 aa25.47■■□□□ 1.67
GAPVD1-210ENST00000461379 GLI2P10070 1586 aa25.47■■□□□ 1.67
GAPVD1-210ENST00000461379 CCDC18Q5T9S5 1454 aa25.46■■□□□ 1.67
GAPVD1-210ENST00000461379 KIF13AQ9H1H9 1805 aa25.44■■□□□ 1.66
GAPVD1-210ENST00000461379 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
GAPVD1-210ENST00000461379 CD109Q6YHK3 1445 aa25.37■■□□□ 1.65
GAPVD1-210ENST00000461379 LRRIQ1Q96JM4 1722 aa25.36■■□□□ 1.65
GAPVD1-210ENST00000461379 MAP3K4Q9Y6R4 1608 aa25.32■■□□□ 1.64
GAPVD1-210ENST00000461379 MAGI3Q5TCQ9 1506 aa25.3■■□□□ 1.64
GAPVD1-210ENST00000461379 ABCA9Q8IUA7 1624 aa25.29■■□□□ 1.64
GAPVD1-210ENST00000461379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.27■■□□□ 1.64
GAPVD1-210ENST00000461379 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
GAPVD1-210ENST00000461379 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
GAPVD1-210ENST00000461379 TEX14Q8IWB6 1497 aa25.25■■□□□ 1.63
GAPVD1-210ENST00000461379 APLP2Q06481 763 aa25.23■■□□□ 1.63
GAPVD1-210ENST00000461379 PPRC1Q5VV67 1664 aaKnown RBP25.23■■□□□ 1.63
GAPVD1-210ENST00000461379 TSPOAP1O95153 1857 aa25.22■■□□□ 1.63
GAPVD1-210ENST00000461379 KIF14Q15058 1648 aa25.22■■□□□ 1.63
GAPVD1-210ENST00000461379 TIAM1Q13009 1591 aa25.21■■□□□ 1.63
GAPVD1-210ENST00000461379 TTC37Q6PGP7 1564 aa25.21■■□□□ 1.63
GAPVD1-210ENST00000461379 KANK4Q5T7N3 995 aaPredicted RBP25.19■■□□□ 1.62
GAPVD1-210ENST00000461379 PLCH2O75038 1416 aa25.19■■□□□ 1.62
GAPVD1-210ENST00000461379 MAP3K1Q13233 1512 aa25.18■■□□□ 1.62
GAPVD1-210ENST00000461379 EHBP1L1Q8N3D4 1523 aa25.16■■□□□ 1.62
GAPVD1-210ENST00000461379 LRRC9Q6ZRR7 1453 aa25.15■■□□□ 1.62
GAPVD1-210ENST00000461379 PHLDB1Q86UU1 1377 aa25.13■■□□□ 1.61
GAPVD1-210ENST00000461379 EFCAB2Q5VUJ9 269 aa25.12■■□□□ 1.61
GAPVD1-210ENST00000461379 NEO1Q92859 1461 aa25.12■■□□□ 1.61
GAPVD1-210ENST00000461379 COL17A1Q9UMD9 1497 aaPredicted RBP25.12■■□□□ 1.61
GAPVD1-210ENST00000461379 FANCAO15360 1455 aa25.11■■□□□ 1.61
GAPVD1-210ENST00000461379 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
GAPVD1-210ENST00000461379 AKNAQ7Z591 1439 aa25.08■■□□□ 1.61
GAPVD1-210ENST00000461379 KDM6BO15054 1643 aa25.08■■□□□ 1.6
GAPVD1-210ENST00000461379 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
GAPVD1-210ENST00000461379 ARAP3Q8WWN8 1544 aa25.07■■□□□ 1.6
GAPVD1-210ENST00000461379 NCOA2Q15596 1464 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms