RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 APLP2Q06481 763 aa11.65□□□□□ -0.54
LSG1-205ENST00000461343 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
LSG1-205ENST00000461343 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
LSG1-205ENST00000461343 ZNF608Q9ULD9 1512 aaPredicted RBP11.64□□□□□ -0.55
LSG1-205ENST00000461343 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
LSG1-205ENST00000461343 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
LSG1-205ENST00000461343 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
LSG1-205ENST00000461343 FOXD1Q16676 465 aa11.59□□□□□ -0.55
LSG1-205ENST00000461343 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
LSG1-205ENST00000461343 FMN1Q68DA7 1419 aa11.59□□□□□ -0.55
LSG1-205ENST00000461343 IQGAP2Q13576 1575 aa11.58□□□□□ -0.55
LSG1-205ENST00000461343 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
LSG1-205ENST00000461343 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
LSG1-205ENST00000461343 MAP3K1Q13233 1512 aa11.54□□□□□ -0.56
LSG1-205ENST00000461343 UGGT2Q9NYU1 1516 aa11.54□□□□□ -0.56
LSG1-205ENST00000461343 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
LSG1-205ENST00000461343 SAMD9Q5K651 1589 aa11.53□□□□□ -0.56
LSG1-205ENST00000461343 NUP160Q12769 1436 aa11.52□□□□□ -0.56
LSG1-205ENST00000461343 CARMIL2Q6F5E8 1435 aa11.52□□□□□ -0.56
LSG1-205ENST00000461343 FYCO1Q9BQS8 1478 aa11.51□□□□□ -0.57
LSG1-205ENST00000461343 RANGAP1P46060 587 aaPredicted RBP11.5□□□□□ -0.57
LSG1-205ENST00000461343 FBLN2P98095 1184 aa11.49□□□□□ -0.57
LSG1-205ENST00000461343 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
LSG1-205ENST00000461343 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
LSG1-205ENST00000461343 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
LSG1-205ENST00000461343 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
LSG1-205ENST00000461343 KIAA0556O60303 1618 aa11.42□□□□□ -0.58
LSG1-205ENST00000461343 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
LSG1-205ENST00000461343 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
LSG1-205ENST00000461343 CHD1O14646 1710 aa11.41□□□□□ -0.58
LSG1-205ENST00000461343 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
LSG1-205ENST00000461343 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.59
LSG1-205ENST00000461343 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
LSG1-205ENST00000461343 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
LSG1-205ENST00000461343 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
LSG1-205ENST00000461343 DISP1Q96F81 1524 aa11.38□□□□□ -0.59
LSG1-205ENST00000461343 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
LSG1-205ENST00000461343 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
LSG1-205ENST00000461343 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
LSG1-205ENST00000461343 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
LSG1-205ENST00000461343 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
LSG1-205ENST00000461343 CLASP1Q7Z460 1538 aa11.34□□□□□ -0.59
LSG1-205ENST00000461343 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
LSG1-205ENST00000461343 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
LSG1-205ENST00000461343 RAPGEF6Q8TEU7 1601 aa11.33□□□□□ -0.6
LSG1-205ENST00000461343 PTPRGP23470 1445 aa11.32□□□□□ -0.6
LSG1-205ENST00000461343 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
LSG1-205ENST00000461343 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
LSG1-205ENST00000461343 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
LSG1-205ENST00000461343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
LSG1-205ENST00000461343 RRBP1Q9P2E9 1410 aaKnown RBP11.27□□□□□ -0.6
LSG1-205ENST00000461343 ABCA8O94911 1581 aa11.26□□□□□ -0.61
LSG1-205ENST00000461343 PPARGC1BQ86YN6 1023 aaKnown RBP11.26□□□□□ -0.61
LSG1-205ENST00000461343 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
LSG1-205ENST00000461343 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
LSG1-205ENST00000461343 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
LSG1-205ENST00000461343 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
LSG1-205ENST00000461343 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
LSG1-205ENST00000461343 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
LSG1-205ENST00000461343 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
LSG1-205ENST00000461343 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
LSG1-205ENST00000461343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
LSG1-205ENST00000461343 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
LSG1-205ENST00000461343 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
LSG1-205ENST00000461343 ABCC2Q92887 1545 aa11.21□□□□□ -0.61
LSG1-205ENST00000461343 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
LSG1-205ENST00000461343 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.61
LSG1-205ENST00000461343 MIA2Q96PC5 1412 aa11.21□□□□□ -0.61
LSG1-205ENST00000461343 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
LSG1-205ENST00000461343 MYOM3Q5VTT5 1437 aa11.2□□□□□ -0.62
LSG1-205ENST00000461343 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
LSG1-205ENST00000461343 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
LSG1-205ENST00000461343 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
LSG1-205ENST00000461343 ADCY10Q96PN6 1610 aa11.18□□□□□ -0.62
LSG1-205ENST00000461343 CDK13Q14004 1512 aaKnown RBP11.18□□□□□ -0.62
LSG1-205ENST00000461343 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
LSG1-205ENST00000461343 KIF14Q15058 1648 aa11.17□□□□□ -0.62
LSG1-205ENST00000461343 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
LSG1-205ENST00000461343 ATP10BO94823 1461 aa11.16□□□□□ -0.62
LSG1-205ENST00000461343 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
LSG1-205ENST00000461343 KDM5BQ9UGL1 1544 aa11.14□□□□□ -0.63
LSG1-205ENST00000461343 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
LSG1-205ENST00000461343 HRCP23327 699 aa11.13□□□□□ -0.63
LSG1-205ENST00000461343 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
LSG1-205ENST00000461343 CLSPNQ9HAW4 1339 aa11.11□□□□□ -0.63
LSG1-205ENST00000461343 MAGI3Q5TCQ9 1506 aa11.11□□□□□ -0.63
LSG1-205ENST00000461343 PTPN23Q9H3S7 1636 aa11.1□□□□□ -0.63
LSG1-205ENST00000461343 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
LSG1-205ENST00000461343 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
LSG1-205ENST00000461343 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
LSG1-205ENST00000461343 CFDP1Q9UEE9 299 aaPredicted RBP11.09□□□□□ -0.63
LSG1-205ENST00000461343 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
LSG1-205ENST00000461343 CCER1Q8TC90 406 aaPredicted RBP11.08□□□□□ -0.64
LSG1-205ENST00000461343 ZCCHC11Q5TAX3 1644 aaKnown RBP11.07□□□□□ -0.64
LSG1-205ENST00000461343 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
LSG1-205ENST00000461343 ARAP3Q8WWN8 1544 aa11.06□□□□□ -0.64
LSG1-205ENST00000461343 ROCK1Q13464 1354 aa11.05□□□□□ -0.64
LSG1-205ENST00000461343 GPATCH8Q9UKJ3 1502 aaKnown RBP11.05□□□□□ -0.64
LSG1-205ENST00000461343 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
LSG1-205ENST00000461343 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms