RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 FHAD1B1AJZ9 1412 aa13.44□□□□□ -0.26
GPN1-206ENST00000461249 FAM9AQ8IZU1 332 aaPredicted RBP13.43□□□□□ -0.26
GPN1-206ENST00000461249 CHD1O14646 1710 aa13.42□□□□□ -0.26
GPN1-206ENST00000461249 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
GPN1-206ENST00000461249 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
GPN1-206ENST00000461249 EEA1Q15075 1411 aa13.39□□□□□ -0.27
GPN1-206ENST00000461249 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
GPN1-206ENST00000461249 CUL7Q14999 1698 aa13.38□□□□□ -0.27
GPN1-206ENST00000461249 GRIN2AQ12879 1464 aa13.37□□□□□ -0.27
GPN1-206ENST00000461249 DNAJC5Q9H3Z4 198 aa13.34□□□□□ -0.27
GPN1-206ENST00000461249 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
GPN1-206ENST00000461249 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
GPN1-206ENST00000461249 NUP160Q12769 1436 aa13.3□□□□□ -0.28
GPN1-206ENST00000461249 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
GPN1-206ENST00000461249 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
GPN1-206ENST00000461249 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
GPN1-206ENST00000461249 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
GPN1-206ENST00000461249 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
GPN1-206ENST00000461249 KIF21BO75037 1637 aa13.23□□□□□ -0.29
GPN1-206ENST00000461249 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
GPN1-206ENST00000461249 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
GPN1-206ENST00000461249 GOLGA3Q08378 1498 aa13.18□□□□□ -0.3
GPN1-206ENST00000461249 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
GPN1-206ENST00000461249 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
GPN1-206ENST00000461249 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
GPN1-206ENST00000461249 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
GPN1-206ENST00000461249 CTTNBP2Q8WZ74 1663 aa13.16□□□□□ -0.3
GPN1-206ENST00000461249 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
GPN1-206ENST00000461249 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.3
GPN1-206ENST00000461249 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.3
GPN1-206ENST00000461249 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.3
GPN1-206ENST00000461249 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
GPN1-206ENST00000461249 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
GPN1-206ENST00000461249 RANGAP1P46060 587 aaPredicted RBP13.12□□□□□ -0.31
GPN1-206ENST00000461249 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
GPN1-206ENST00000461249 MSH5O43196 834 aa13.1□□□□□ -0.31
GPN1-206ENST00000461249 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
GPN1-206ENST00000461249 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
GPN1-206ENST00000461249 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
GPN1-206ENST00000461249 DISP1Q96F81 1524 aa13.08□□□□□ -0.32
GPN1-206ENST00000461249 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
GPN1-206ENST00000461249 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
GPN1-206ENST00000461249 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
GPN1-206ENST00000461249 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
GPN1-206ENST00000461249 PTPRGP23470 1445 aa13.04□□□□□ -0.32
GPN1-206ENST00000461249 KIAA0556O60303 1618 aa13.03□□□□□ -0.32
GPN1-206ENST00000461249 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
GPN1-206ENST00000461249 SLC24A1O60721 1099 aa13□□□□□ -0.33
GPN1-206ENST00000461249 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
GPN1-206ENST00000461249 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
GPN1-206ENST00000461249 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
GPN1-206ENST00000461249 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
GPN1-206ENST00000461249 CLIP1P30622 1438 aa12.96□□□□□ -0.33
GPN1-206ENST00000461249 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
GPN1-206ENST00000461249 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
GPN1-206ENST00000461249 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
GPN1-206ENST00000461249 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
GPN1-206ENST00000461249 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
GPN1-206ENST00000461249 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
GPN1-206ENST00000461249 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
GPN1-206ENST00000461249 ABCA8O94911 1581 aa12.9□□□□□ -0.35
GPN1-206ENST00000461249 ABCC2Q92887 1545 aa12.89□□□□□ -0.35
GPN1-206ENST00000461249 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
GPN1-206ENST00000461249 ARID3CA6NKF2 412 aa12.86□□□□□ -0.35
GPN1-206ENST00000461249 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
GPN1-206ENST00000461249 RAPGEF6Q8TEU7 1601 aa12.86□□□□□ -0.35
GPN1-206ENST00000461249 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.35
GPN1-206ENST00000461249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
GPN1-206ENST00000461249 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
GPN1-206ENST00000461249 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
GPN1-206ENST00000461249 ATP10BO94823 1461 aa12.82□□□□□ -0.36
GPN1-206ENST00000461249 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
GPN1-206ENST00000461249 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
GPN1-206ENST00000461249 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
GPN1-206ENST00000461249 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
GPN1-206ENST00000461249 PCF11O94913 1555 aaKnown RBP12.78□□□□□ -0.36
GPN1-206ENST00000461249 HECW1Q76N89 1606 aa12.78□□□□□ -0.36
GPN1-206ENST00000461249 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
GPN1-206ENST00000461249 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
GPN1-206ENST00000461249 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
GPN1-206ENST00000461249 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.37
GPN1-206ENST00000461249 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
GPN1-206ENST00000461249 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.37
GPN1-206ENST00000461249 PLEKHD1A6NEE1 506 aa12.76□□□□□ -0.37
GPN1-206ENST00000461249 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
GPN1-206ENST00000461249 KCNH8Q96L42 1107 aa12.75□□□□□ -0.37
GPN1-206ENST00000461249 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
GPN1-206ENST00000461249 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
GPN1-206ENST00000461249 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
GPN1-206ENST00000461249 FKBP8Q14318 412 aa12.73□□□□□ -0.37
GPN1-206ENST00000461249 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
GPN1-206ENST00000461249 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
GPN1-206ENST00000461249 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
GPN1-206ENST00000461249 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
GPN1-206ENST00000461249 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
GPN1-206ENST00000461249 APLP2Q06481 763 aa12.68□□□□□ -0.38
GPN1-206ENST00000461249 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
GPN1-206ENST00000461249 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
GPN1-206ENST00000461249 GLI2P10070 1586 aa12.66□□□□□ -0.38
GPN1-206ENST00000461249 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms