RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
ERGIC3-211ENST00000461043 KIAA0586Q9BVV6 1533 aa20.33■□□□□ 0.85
ERGIC3-211ENST00000461043 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
ERGIC3-211ENST00000461043 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
ERGIC3-211ENST00000461043 ERCC6L2Q5T890 1561 aa20.26■□□□□ 0.83
ERGIC3-211ENST00000461043 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
ERGIC3-211ENST00000461043 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
ERGIC3-211ENST00000461043 PRG4Q92954 1404 aaPredicted RBP20.22■□□□□ 0.83
ERGIC3-211ENST00000461043 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
ERGIC3-211ENST00000461043 KIF21BO75037 1637 aa20.2■□□□□ 0.82
ERGIC3-211ENST00000461043 CTTNBP2Q8WZ74 1663 aa20.16■□□□□ 0.82
ERGIC3-211ENST00000461043 UGGT2Q9NYU1 1516 aa20.16■□□□□ 0.82
ERGIC3-211ENST00000461043 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
ERGIC3-211ENST00000461043 DISP1Q96F81 1524 aa20.12■□□□□ 0.81
ERGIC3-211ENST00000461043 CARMIL2Q6F5E8 1435 aa20.07■□□□□ 0.8
ERGIC3-211ENST00000461043 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
ERGIC3-211ENST00000461043 KIAA0556O60303 1618 aa20.05■□□□□ 0.8
ERGIC3-211ENST00000461043 TNIKQ9UKE5 1360 aa20.02■□□□□ 0.8
ERGIC3-211ENST00000461043 PTPRGP23470 1445 aa19.98■□□□□ 0.79
ERGIC3-211ENST00000461043 SAMD9Q5K651 1589 aa19.98■□□□□ 0.79
ERGIC3-211ENST00000461043 ADCY10Q96PN6 1610 aa19.93■□□□□ 0.78
ERGIC3-211ENST00000461043 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
ERGIC3-211ENST00000461043 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
ERGIC3-211ENST00000461043 UHRF1BP1LA0JNW5 1464 aa19.89■□□□□ 0.77
ERGIC3-211ENST00000461043 EFCAB5A4FU69 1503 aa19.89■□□□□ 0.77
ERGIC3-211ENST00000461043 UACAQ9BZF9 1416 aa19.87■□□□□ 0.77
ERGIC3-211ENST00000461043 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
ERGIC3-211ENST00000461043 ABCA8O94911 1581 aa19.83■□□□□ 0.77
ERGIC3-211ENST00000461043 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
ERGIC3-211ENST00000461043 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
ERGIC3-211ENST00000461043 P3H3Q8IVL6 736 aa19.82■□□□□ 0.76
ERGIC3-211ENST00000461043 FHOD3Q2V2M9 1422 aa19.82■□□□□ 0.76
ERGIC3-211ENST00000461043 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
ERGIC3-211ENST00000461043 RANGAP1P46060 587 aaPredicted RBP19.8■□□□□ 0.76
ERGIC3-211ENST00000461043 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
ERGIC3-211ENST00000461043 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
ERGIC3-211ENST00000461043 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
ERGIC3-211ENST00000461043 ZCCHC11Q5TAX3 1644 aaKnown RBP19.72■□□□□ 0.75
ERGIC3-211ENST00000461043 RAPGEF6Q8TEU7 1601 aa19.71■□□□□ 0.75
ERGIC3-211ENST00000461043 CLIP1P30622 1438 aa19.69■□□□□ 0.74
ERGIC3-211ENST00000461043 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
ERGIC3-211ENST00000461043 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
ERGIC3-211ENST00000461043 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
ERGIC3-211ENST00000461043 ABCC10Q5T3U5 1492 aa19.67■□□□□ 0.74
ERGIC3-211ENST00000461043 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
ERGIC3-211ENST00000461043 ATP10BO94823 1461 aa19.66■□□□□ 0.74
ERGIC3-211ENST00000461043 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
ERGIC3-211ENST00000461043 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
ERGIC3-211ENST00000461043 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
ERGIC3-211ENST00000461043 KIF13AQ9H1H9 1805 aa19.62■□□□□ 0.73
ERGIC3-211ENST00000461043 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
ERGIC3-211ENST00000461043 GLI2P10070 1586 aa19.57■□□□□ 0.72
ERGIC3-211ENST00000461043 EPRSP07814 1512 aaKnown RBP19.57■□□□□ 0.72
ERGIC3-211ENST00000461043 HECW1Q76N89 1606 aa19.57■□□□□ 0.72
ERGIC3-211ENST00000461043 FAM69CQ0P6D2 419 aa19.56■□□□□ 0.72
ERGIC3-211ENST00000461043 CASKIN1Q8WXD9 1431 aa19.56■□□□□ 0.72
ERGIC3-211ENST00000461043 ARID3CA6NKF2 412 aa19.55■□□□□ 0.72
ERGIC3-211ENST00000461043 PCF11O94913 1555 aaKnown RBP19.55■□□□□ 0.72
ERGIC3-211ENST00000461043 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
ERGIC3-211ENST00000461043 FYCO1Q9BQS8 1478 aa19.52■□□□□ 0.72
ERGIC3-211ENST00000461043 LRRIQ1Q96JM4 1722 aa19.49■□□□□ 0.71
ERGIC3-211ENST00000461043 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
ERGIC3-211ENST00000461043 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
ERGIC3-211ENST00000461043 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
ERGIC3-211ENST00000461043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
ERGIC3-211ENST00000461043 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
ERGIC3-211ENST00000461043 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
ERGIC3-211ENST00000461043 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
ERGIC3-211ENST00000461043 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
ERGIC3-211ENST00000461043 ABCA9Q8IUA7 1624 aa19.42■□□□□ 0.7
ERGIC3-211ENST00000461043 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
ERGIC3-211ENST00000461043 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
ERGIC3-211ENST00000461043 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
ERGIC3-211ENST00000461043 MAGI3Q5TCQ9 1506 aa19.38■□□□□ 0.69
ERGIC3-211ENST00000461043 CD109Q6YHK3 1445 aa19.38■□□□□ 0.69
ERGIC3-211ENST00000461043 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
ERGIC3-211ENST00000461043 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
ERGIC3-211ENST00000461043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERGIC3-211ENST00000461043 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
ERGIC3-211ENST00000461043 TTC37Q6PGP7 1564 aa19.33■□□□□ 0.69
ERGIC3-211ENST00000461043 KIF14Q15058 1648 aa19.32■□□□□ 0.68
ERGIC3-211ENST00000461043 TIAM1Q13009 1591 aa19.27■□□□□ 0.67
ERGIC3-211ENST00000461043 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
ERGIC3-211ENST00000461043 KDM6BO15054 1643 aa19.25■□□□□ 0.67
ERGIC3-211ENST00000461043 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-211ENST00000461043 ARAP3Q8WWN8 1544 aa19.25■□□□□ 0.67
ERGIC3-211ENST00000461043 PLCH2O75038 1416 aa19.25■□□□□ 0.67
ERGIC3-211ENST00000461043 NEO1Q92859 1461 aa19.24■□□□□ 0.67
ERGIC3-211ENST00000461043 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
ERGIC3-211ENST00000461043 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
ERGIC3-211ENST00000461043 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
ERGIC3-211ENST00000461043 MYO5CQ9NQX4 1742 aa19.2■□□□□ 0.66
ERGIC3-211ENST00000461043 FANCAO15360 1455 aa19.2■□□□□ 0.66
ERGIC3-211ENST00000461043 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
ERGIC3-211ENST00000461043 CFAP74Q9C0B2 1584 aa19.19■□□□□ 0.66
ERGIC3-211ENST00000461043 PREX2Q70Z35 1606 aa19.17■□□□□ 0.66
ERGIC3-211ENST00000461043 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
ERGIC3-211ENST00000461043 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
ERGIC3-211ENST00000461043 CDC42BPAQ5VT25 1732 aa19.14■□□□□ 0.66
ERGIC3-211ENST00000461043 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms