RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 FGD5Q6ZNL6 1462 aa8.85□□□□□ -0.99
HLA-DQA1-205ENST00000460633 TRHP20396 242 aaPredicted RBP8.84□□□□□ -0.99
HLA-DQA1-205ENST00000460633 MAGI1Q96QZ7 1491 aaPredicted RBP8.84□□□□□ -0.99
HLA-DQA1-205ENST00000460633 NESP48681 1621 aa8.84□□□□□ -0.99
HLA-DQA1-205ENST00000460633 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
HLA-DQA1-205ENST00000460633 OSCARQ8IYS5 282 aa8.83□□□□□ -1
HLA-DQA1-205ENST00000460633 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
HLA-DQA1-205ENST00000460633 FHAD1B1AJZ9 1412 aa8.82□□□□□ -1
HLA-DQA1-205ENST00000460633 CUL7Q14999 1698 aa8.82□□□□□ -1
HLA-DQA1-205ENST00000460633 SCAF1Q9H7N4 1312 aaKnown RBP8.82□□□□□ -1
HLA-DQA1-205ENST00000460633 ABCA10Q8WWZ4 1543 aa8.81□□□□□ -1
HLA-DQA1-205ENST00000460633 DAXXQ9UER7 740 aaPredicted RBP8.81□□□□□ -1
HLA-DQA1-205ENST00000460633 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
HLA-DQA1-205ENST00000460633 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
HLA-DQA1-205ENST00000460633 SYNJ1O43426 1573 aa8.8□□□□□ -1
HLA-DQA1-205ENST00000460633 CARMIL1Q5VZK9 1371 aa8.8□□□□□ -1
HLA-DQA1-205ENST00000460633 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
HLA-DQA1-205ENST00000460633 RAPGEF2Q9Y4G8 1499 aa8.78□□□□□ -1
HLA-DQA1-205ENST00000460633 ZBTB47Q9UFB7 747 aaPredicted RBP8.77□□□□□ -1
HLA-DQA1-205ENST00000460633 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQA1-205ENST00000460633 URB2Q14146 1524 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-205ENST00000460633 SYNJ2O15056 1496 aa8.75□□□□□ -1.01
HLA-DQA1-205ENST00000460633 CUX1P39880 1505 aa8.75□□□□□ -1.01
HLA-DQA1-205ENST00000460633 THOC2Q8NI27 1593 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-205ENST00000460633 HAP1P54257 671 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-205ENST00000460633 ARID4BQ4LE39 1312 aaPredicted RBP8.73□□□□□ -1.01
HLA-DQA1-205ENST00000460633 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
HLA-DQA1-205ENST00000460633 TDRD9Q8NDG6 1382 aaKnown RBP8.71□□□□□ -1.01
HLA-DQA1-205ENST00000460633 C14orf37Q86TY3 774 aa8.71□□□□□ -1.02
HLA-DQA1-205ENST00000460633 EIF5BO60841 1220 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-205ENST00000460633 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
HLA-DQA1-205ENST00000460633 SNAPC4Q5SXM2 1469 aa8.69□□□□□ -1.02
HLA-DQA1-205ENST00000460633 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
HLA-DQA1-205ENST00000460633 CLIP1P30622 1438 aa8.68□□□□□ -1.02
HLA-DQA1-205ENST00000460633 ITGAEP38570 1179 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 PLPPR3Q6T4P5 718 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 FMN1Q68DA7 1419 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 RAD54L2Q9Y4B4 1467 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 TNIKQ9UKE5 1360 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 EFCAB5A4FU69 1503 aa8.67□□□□□ -1.02
HLA-DQA1-205ENST00000460633 KIF21BO75037 1637 aa8.66□□□□□ -1.02
HLA-DQA1-205ENST00000460633 RTL5Q5HYW3 569 aaPredicted RBP8.65□□□□□ -1.02
HLA-DQA1-205ENST00000460633 KIAA0586Q9BVV6 1533 aa8.64□□□□□ -1.03
HLA-DQA1-205ENST00000460633 AQRO60306 1485 aaKnown RBP eCLIP8.64□□□□□ -1.03
HLA-DQA1-205ENST00000460633 EIF4G3O43432 1585 aaKnown RBP8.64□□□□□ -1.03
HLA-DQA1-205ENST00000460633 PPP1R15AO75807 674 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-205ENST00000460633 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
HLA-DQA1-205ENST00000460633 GRIN2AQ12879 1464 aa8.63□□□□□ -1.03
HLA-DQA1-205ENST00000460633 ADAMTS12P58397 1594 aa8.62□□□□□ -1.03
HLA-DQA1-205ENST00000460633 PLEKHD1A6NEE1 506 aa8.62□□□□□ -1.03
HLA-DQA1-205ENST00000460633 IGF1RP08069 1367 aa8.62□□□□□ -1.03
HLA-DQA1-205ENST00000460633 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
HLA-DQA1-205ENST00000460633 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
HLA-DQA1-205ENST00000460633 ABCA5Q8WWZ7 1642 aa8.6□□□□□ -1.03
HLA-DQA1-205ENST00000460633 JPH4Q96JJ6 628 aa8.6□□□□□ -1.03
HLA-DQA1-205ENST00000460633 PTPRGP23470 1445 aa8.6□□□□□ -1.03
HLA-DQA1-205ENST00000460633 TARBP1Q13395 1621 aaKnown RBP8.59□□□□□ -1.03
HLA-DQA1-205ENST00000460633 EIF4G2P78344 907 aaKnown RBP eCLIP8.59□□□□□ -1.03
HLA-DQA1-205ENST00000460633 CCDC18Q5T9S5 1454 aa8.59□□□□□ -1.03
HLA-DQA1-205ENST00000460633 IQGAP2Q13576 1575 aa8.59□□□□□ -1.04
HLA-DQA1-205ENST00000460633 RTN4Q9NQC3 1192 aaKnown RBP8.57□□□□□ -1.04
HLA-DQA1-205ENST00000460633 CNGB1Q14028 1251 aaPredicted RBP8.56□□□□□ -1.04
HLA-DQA1-205ENST00000460633 A0A0G2JS52 829 aa8.55□□□□□ -1.04
HLA-DQA1-205ENST00000460633 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
HLA-DQA1-205ENST00000460633 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
HLA-DQA1-205ENST00000460633 HMGB2P26583 209 aaKnown RBP8.54□□□□□ -1.04
HLA-DQA1-205ENST00000460633 TMX4Q9H1E5 349 aaPredicted RBP8.54□□□□□ -1.04
HLA-DQA1-205ENST00000460633 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
HLA-DQA1-205ENST00000460633 MTUS2Q5JR59 1369 aa8.53□□□□□ -1.04
HLA-DQA1-205ENST00000460633 NUP160Q12769 1436 aa8.53□□□□□ -1.04
HLA-DQA1-205ENST00000460633 HECW1Q76N89 1606 aa8.52□□□□□ -1.05
HLA-DQA1-205ENST00000460633 CEP162Q5TB80 1403 aa8.52□□□□□ -1.05
HLA-DQA1-205ENST00000460633 CTTNBP2Q8WZ74 1663 aa8.52□□□□□ -1.05
HLA-DQA1-205ENST00000460633 ZNF608Q9ULD9 1512 aaPredicted RBP8.51□□□□□ -1.05
HLA-DQA1-205ENST00000460633 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
HLA-DQA1-205ENST00000460633 FKBP8Q14318 412 aa8.51□□□□□ -1.05
HLA-DQA1-205ENST00000460633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.51□□□□□ -1.05
HLA-DQA1-205ENST00000460633 TSPY4P0CV99 314 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 TSPY10P0CW01 314 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 RSPH4AQ5TD94 716 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 PHLDB1Q86UU1 1377 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 CLSPNQ9HAW4 1339 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 UGGT2Q9NYU1 1516 aa8.5□□□□□ -1.05
HLA-DQA1-205ENST00000460633 NPHP1O15259 732 aa8.49□□□□□ -1.05
HLA-DQA1-205ENST00000460633 PLB1Q6P1J6 1458 aa8.49□□□□□ -1.05
HLA-DQA1-205ENST00000460633 ANP32CO43423 234 aa8.49□□□□□ -1.05
HLA-DQA1-205ENST00000460633 UACAQ9BZF9 1416 aa8.48□□□□□ -1.05
HLA-DQA1-205ENST00000460633 MIER1Q8N108 512 aa8.48□□□□□ -1.05
HLA-DQA1-205ENST00000460633 PLEKHH2Q8IVE3 1493 aa8.48□□□□□ -1.05
HLA-DQA1-205ENST00000460633 P3H3Q8IVL6 736 aa8.47□□□□□ -1.05
HLA-DQA1-205ENST00000460633 TEX14Q8IWB6 1497 aa8.46□□□□□ -1.05
HLA-DQA1-205ENST00000460633 FYCO1Q9BQS8 1478 aa8.46□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
HLA-DQA1-205ENST00000460633 ANP32EQ9BTT0 268 aa8.46□□□□□ -1.06
HLA-DQA1-205ENST00000460633 EFCAB2Q5VUJ9 269 aa8.45□□□□□ -1.06
HLA-DQA1-205ENST00000460633 PHF23Q9BUL5 403 aaPredicted RBP8.45□□□□□ -1.06
HLA-DQA1-205ENST00000460633 VPS8Q8N3P4 1428 aa8.44□□□□□ -1.06
HLA-DQA1-205ENST00000460633 CHD1O14646 1710 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms