RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 LRRC9Q6ZRR7 1453 aa30.34■■■□□ 2.45
CRAT-207ENST00000458362 ABCA10Q8WWZ4 1543 aa30.34■■■□□ 2.45
CRAT-207ENST00000458362 POLA1P09884 1462 aaPredicted RBP30.34■■■□□ 2.45
CRAT-207ENST00000458362 PELP1Q8IZL8 1130 aaKnown RBP30.32■■■□□ 2.44
CRAT-207ENST00000458362 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
CRAT-207ENST00000458362 CFAP43Q8NDM7 1665 aa30.3■■■□□ 2.44
CRAT-207ENST00000458362 P3H3Q8IVL6 736 aa30.27■■■□□ 2.44
CRAT-207ENST00000458362 FHAD1B1AJZ9 1412 aa30.27■■■□□ 2.44
CRAT-207ENST00000458362 PHLDB1Q86UU1 1377 aa30.26■■■□□ 2.43
CRAT-207ENST00000458362 RAB3GAP2Q9H2M9 1393 aa30.25■■■□□ 2.43
CRAT-207ENST00000458362 LAMC3Q9Y6N6 1575 aa30.22■■■□□ 2.43
CRAT-207ENST00000458362 FHOD3Q2V2M9 1422 aa30.21■■■□□ 2.43
CRAT-207ENST00000458362 CUL7Q14999 1698 aa30.2■■■□□ 2.43
CRAT-207ENST00000458362 MAPKBP1O60336 1514 aa30.17■■■□□ 2.42
CRAT-207ENST00000458362 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
CRAT-207ENST00000458362 EFCAB5A4FU69 1503 aa30.16■■■□□ 2.42
CRAT-207ENST00000458362 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
CRAT-207ENST00000458362 URB2Q14146 1524 aaKnown RBP30.13■■■□□ 2.41
CRAT-207ENST00000458362 SETD5Q9C0A6 1442 aa30.13■■■□□ 2.41
CRAT-207ENST00000458362 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
CRAT-207ENST00000458362 ATP1B4Q9UN42 357 aaPredicted RBP30.12■■■□□ 2.41
CRAT-207ENST00000458362 FAM50AQ14320 339 aaKnown RBP30.08■■■□□ 2.41
CRAT-207ENST00000458362 CASKIN1Q8WXD9 1431 aa30.08■■■□□ 2.41
CRAT-207ENST00000458362 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.4
CRAT-207ENST00000458362 ABCA5Q8WWZ7 1642 aa30.01■■■□□ 2.39
CRAT-207ENST00000458362 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
CRAT-207ENST00000458362 PDS5BQ9NTI5 1447 aa29.97■■■□□ 2.39
CRAT-207ENST00000458362 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
CRAT-207ENST00000458362 FMN1Q68DA7 1419 aa29.93■■■□□ 2.38
CRAT-207ENST00000458362 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
CRAT-207ENST00000458362 GAPVD1Q14C86 1478 aa29.91■■■□□ 2.38
CRAT-207ENST00000458362 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
CRAT-207ENST00000458362 LRRIQ1Q96JM4 1722 aa29.89■■■□□ 2.38
CRAT-207ENST00000458362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.89■■■□□ 2.37
CRAT-207ENST00000458362 SIN3AQ96ST3 1273 aa29.88■■■□□ 2.37
CRAT-207ENST00000458362 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
CRAT-207ENST00000458362 FGD6Q6ZV73 1430 aa29.84■■■□□ 2.37
CRAT-207ENST00000458362 GRIN2BQ13224 1484 aa29.79■■■□□ 2.36
CRAT-207ENST00000458362 MTUS2Q5JR59 1369 aa29.78■■■□□ 2.36
CRAT-207ENST00000458362 TARBP1Q13395 1621 aaKnown RBP29.77■■■□□ 2.36
CRAT-207ENST00000458362 PTPRKQ15262 1439 aa29.72■■■□□ 2.35
CRAT-207ENST00000458362 THOC2Q8NI27 1593 aaKnown RBP29.7■■■□□ 2.35
CRAT-207ENST00000458362 NCOA2Q15596 1464 aa29.7■■■□□ 2.35
CRAT-207ENST00000458362 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
CRAT-207ENST00000458362 CCDC18Q5T9S5 1454 aa29.66■■■□□ 2.34
CRAT-207ENST00000458362 MYOM3Q5VTT5 1437 aa29.66■■■□□ 2.34
CRAT-207ENST00000458362 SUPT6HQ7KZ85 1726 aaKnown RBP29.66■■■□□ 2.34
CRAT-207ENST00000458362 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
CRAT-207ENST00000458362 PTPN23Q9H3S7 1636 aa29.65■■■□□ 2.34
CRAT-207ENST00000458362 EHBP1L1Q8N3D4 1523 aa29.64■■■□□ 2.33
CRAT-207ENST00000458362 HFM1A2PYH4 1435 aa29.64■■■□□ 2.33
CRAT-207ENST00000458362 MAGI3Q5TCQ9 1506 aa29.61■■■□□ 2.33
CRAT-207ENST00000458362 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
CRAT-207ENST00000458362 KCNH8Q96L42 1107 aa29.6■■■□□ 2.33
CRAT-207ENST00000458362 UGGT2Q9NYU1 1516 aa29.58■■■□□ 2.33
CRAT-207ENST00000458362 ARHGEF11O15085 1522 aa29.57■■■□□ 2.32
CRAT-207ENST00000458362 NAIPQ13075 1403 aa29.56■■■□□ 2.32
CRAT-207ENST00000458362 UACAQ9BZF9 1416 aa29.56■■■□□ 2.32
CRAT-207ENST00000458362 DDX10Q13206 875 aaKnown RBP29.55■■■□□ 2.32
CRAT-207ENST00000458362 ADAMTS12P58397 1594 aa29.53■■■□□ 2.32
CRAT-207ENST00000458362 IQGAP2Q13576 1575 aa29.52■■■□□ 2.32
CRAT-207ENST00000458362 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
CRAT-207ENST00000458362 HECW1Q76N89 1606 aa29.5■■■□□ 2.31
CRAT-207ENST00000458362 HIRIP3Q9BW71 556 aaPredicted RBP29.49■■■□□ 2.31
CRAT-207ENST00000458362 TONSLQ96HA7 1378 aa29.46■■■□□ 2.31
CRAT-207ENST00000458362 TCOF1Q13428 1488 aaKnown RBP29.44■■■□□ 2.3
CRAT-207ENST00000458362 SUPT16HQ9Y5B9 1047 aaKnown RBP29.43■■■□□ 2.3
CRAT-207ENST00000458362 EPRSP07814 1512 aaKnown RBP29.43■■■□□ 2.3
CRAT-207ENST00000458362 CDK13Q14004 1512 aaKnown RBP29.41■■■□□ 2.3
CRAT-207ENST00000458362 WDR62O43379 1518 aa29.39■■■□□ 2.3
CRAT-207ENST00000458362 GCC2Q8IWJ2 1684 aa29.38■■■□□ 2.29
CRAT-207ENST00000458362 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
CRAT-207ENST00000458362 KDM5BQ9UGL1 1544 aa29.36■■■□□ 2.29
CRAT-207ENST00000458362 CHIC2Q9UKJ5 165 aa29.34■■■□□ 2.29
CRAT-207ENST00000458362 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
CRAT-207ENST00000458362 ZNF608Q9ULD9 1512 aaPredicted RBP29.33■■■□□ 2.29
CRAT-207ENST00000458362 KDM6BO15054 1643 aa29.33■■■□□ 2.29
CRAT-207ENST00000458362 ARID3CA6NKF2 412 aa29.31■■■□□ 2.28
CRAT-207ENST00000458362 DENND4BO75064 1496 aaPredicted RBP29.3■■■□□ 2.28
CRAT-207ENST00000458362 AKNAQ7Z591 1439 aa29.26■■■□□ 2.28
CRAT-207ENST00000458362 MIA2Q96PC5 1412 aa29.26■■■□□ 2.28
CRAT-207ENST00000458362 KIAA0556O60303 1618 aa29.22■■■□□ 2.27
CRAT-207ENST00000458362 DISP1Q96F81 1524 aa29.22■■■□□ 2.27
CRAT-207ENST00000458362 KIAA0586Q9BVV6 1533 aa29.21■■■□□ 2.27
CRAT-207ENST00000458362 CCER2I3L3R5 266 aa29.2■■■□□ 2.27
CRAT-207ENST00000458362 ANP32CO43423 234 aa29.2■■■□□ 2.26
CRAT-207ENST00000458362 TRIM52Q96A61 297 aa29.19■■■□□ 2.26
CRAT-207ENST00000458362 NUP153P49790 1475 aaKnown RBP29.14■■■□□ 2.26
CRAT-207ENST00000458362 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
CRAT-207ENST00000458362 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
CRAT-207ENST00000458362 MPHOSPH9Q99550 1183 aa29.11■■■□□ 2.25
CRAT-207ENST00000458362 RAPGEF6Q8TEU7 1601 aa29.11■■■□□ 2.25
CRAT-207ENST00000458362 DAPK1P53355 1430 aa29.1■■■□□ 2.25
CRAT-207ENST00000458362 DNMT1P26358 1616 aaKnown RBP29.08■■■□□ 2.25
CRAT-207ENST00000458362 ABCC5O15440 1437 aa29.06■■■□□ 2.24
CRAT-207ENST00000458362 FOXD1Q16676 465 aa29.05■■■□□ 2.24
CRAT-207ENST00000458362 ZNF644Q9H582 1327 aaPredicted RBP29.05■■■□□ 2.24
CRAT-207ENST00000458362 HSPA5P11021 654 aaKnown RBP29.04■■■□□ 2.24
CRAT-207ENST00000458362 ROCK1Q13464 1354 aa29.04■■■□□ 2.24
CRAT-207ENST00000458362 MAGI1Q96QZ7 1491 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms