RNA–Protein interactions for RNA: ENST00000457601.1

SDHAP1-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4

Gene SDHAP1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-208ENST00000457601 NUP160Q12769 1436 aa20.45■□□□□ 0.86
SDHAP1-208ENST00000457601 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
SDHAP1-208ENST00000457601 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
SDHAP1-208ENST00000457601 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
SDHAP1-208ENST00000457601 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
SDHAP1-208ENST00000457601 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
SDHAP1-208ENST00000457601 CLASP1Q7Z460 1538 aa20.39■□□□□ 0.85
SDHAP1-208ENST00000457601 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
SDHAP1-208ENST00000457601 KIAA0586Q9BVV6 1533 aa20.37■□□□□ 0.85
SDHAP1-208ENST00000457601 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
SDHAP1-208ENST00000457601 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
SDHAP1-208ENST00000457601 ARHGEF11O15085 1522 aa20.28■□□□□ 0.84
SDHAP1-208ENST00000457601 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.83
SDHAP1-208ENST00000457601 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
SDHAP1-208ENST00000457601 SAMD9Q5K651 1589 aa20.24■□□□□ 0.83
SDHAP1-208ENST00000457601 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
SDHAP1-208ENST00000457601 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
SDHAP1-208ENST00000457601 CLIP1P30622 1438 aa20.19■□□□□ 0.82
SDHAP1-208ENST00000457601 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
SDHAP1-208ENST00000457601 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
SDHAP1-208ENST00000457601 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
SDHAP1-208ENST00000457601 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
SDHAP1-208ENST00000457601 PRG4Q92954 1404 aaPredicted RBP20.16■□□□□ 0.82
SDHAP1-208ENST00000457601 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
SDHAP1-208ENST00000457601 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
SDHAP1-208ENST00000457601 CARMIL2Q6F5E8 1435 aa20.11■□□□□ 0.81
SDHAP1-208ENST00000457601 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
SDHAP1-208ENST00000457601 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
SDHAP1-208ENST00000457601 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
SDHAP1-208ENST00000457601 PCF11O94913 1555 aaKnown RBP19.98■□□□□ 0.79
SDHAP1-208ENST00000457601 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
SDHAP1-208ENST00000457601 VPS8Q8N3P4 1428 aa19.96■□□□□ 0.79
SDHAP1-208ENST00000457601 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
SDHAP1-208ENST00000457601 PTPRGP23470 1445 aa19.94■□□□□ 0.78
SDHAP1-208ENST00000457601 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
SDHAP1-208ENST00000457601 ABCA8O94911 1581 aa19.93■□□□□ 0.78
SDHAP1-208ENST00000457601 TTBK1Q5TCY1 1321 aaPredicted RBP19.92■□□□□ 0.78
SDHAP1-208ENST00000457601 PLB1Q6P1J6 1458 aa19.91■□□□□ 0.78
SDHAP1-208ENST00000457601 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
SDHAP1-208ENST00000457601 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
SDHAP1-208ENST00000457601 CASKIN1Q8WXD9 1431 aa19.88■□□□□ 0.77
SDHAP1-208ENST00000457601 LRRIQ1Q96JM4 1722 aa19.88■□□□□ 0.77
SDHAP1-208ENST00000457601 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
SDHAP1-208ENST00000457601 UACAQ9BZF9 1416 aa19.85■□□□□ 0.77
SDHAP1-208ENST00000457601 ADCY10Q96PN6 1610 aa19.85■□□□□ 0.77
SDHAP1-208ENST00000457601 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
SDHAP1-208ENST00000457601 UHRF1BP1LA0JNW5 1464 aa19.82■□□□□ 0.76
SDHAP1-208ENST00000457601 CFAP43Q8NDM7 1665 aa19.81■□□□□ 0.76
SDHAP1-208ENST00000457601 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
SDHAP1-208ENST00000457601 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.76
SDHAP1-208ENST00000457601 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
SDHAP1-208ENST00000457601 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
SDHAP1-208ENST00000457601 ZCCHC11Q5TAX3 1644 aaKnown RBP19.76■□□□□ 0.75
SDHAP1-208ENST00000457601 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
SDHAP1-208ENST00000457601 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
SDHAP1-208ENST00000457601 ATP10BO94823 1461 aa19.72■□□□□ 0.75
SDHAP1-208ENST00000457601 MAP3K1Q13233 1512 aa19.71■□□□□ 0.75
SDHAP1-208ENST00000457601 ARID3CA6NKF2 412 aa19.7■□□□□ 0.74
SDHAP1-208ENST00000457601 MAGI3Q5TCQ9 1506 aa19.66■□□□□ 0.74
SDHAP1-208ENST00000457601 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
SDHAP1-208ENST00000457601 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
SDHAP1-208ENST00000457601 APLP2Q06481 763 aa19.62■□□□□ 0.73
SDHAP1-208ENST00000457601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
SDHAP1-208ENST00000457601 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
SDHAP1-208ENST00000457601 MAPKBP1O60336 1514 aa19.6■□□□□ 0.73
SDHAP1-208ENST00000457601 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.72
SDHAP1-208ENST00000457601 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
SDHAP1-208ENST00000457601 WDR7Q9Y4E6 1490 aa19.57■□□□□ 0.72
SDHAP1-208ENST00000457601 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
SDHAP1-208ENST00000457601 KIF14Q15058 1648 aa19.56■□□□□ 0.72
SDHAP1-208ENST00000457601 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
SDHAP1-208ENST00000457601 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
SDHAP1-208ENST00000457601 SUPT6HQ7KZ85 1726 aaKnown RBP19.55■□□□□ 0.72
SDHAP1-208ENST00000457601 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
SDHAP1-208ENST00000457601 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
SDHAP1-208ENST00000457601 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
SDHAP1-208ENST00000457601 PPARGC1BQ86YN6 1023 aaKnown RBP19.51■□□□□ 0.71
SDHAP1-208ENST00000457601 TTC37Q6PGP7 1564 aa19.49■□□□□ 0.71
SDHAP1-208ENST00000457601 NCOA2Q15596 1464 aa19.48■□□□□ 0.71
SDHAP1-208ENST00000457601 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
SDHAP1-208ENST00000457601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.46■□□□□ 0.71
SDHAP1-208ENST00000457601 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
SDHAP1-208ENST00000457601 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
SDHAP1-208ENST00000457601 KIF13AQ9H1H9 1805 aa19.45■□□□□ 0.7
SDHAP1-208ENST00000457601 ITSN2Q9NZM3 1697 aa19.43■□□□□ 0.7
SDHAP1-208ENST00000457601 CDC42BPAQ5VT25 1732 aa19.42■□□□□ 0.7
SDHAP1-208ENST00000457601 MYO5CQ9NQX4 1742 aa19.42■□□□□ 0.7
SDHAP1-208ENST00000457601 GLI2P10070 1586 aa19.41■□□□□ 0.7
SDHAP1-208ENST00000457601 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
SDHAP1-208ENST00000457601 KCNH8Q96L42 1107 aa19.4■□□□□ 0.7
SDHAP1-208ENST00000457601 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
SDHAP1-208ENST00000457601 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
SDHAP1-208ENST00000457601 MYOM3Q5VTT5 1437 aa19.36■□□□□ 0.69
SDHAP1-208ENST00000457601 CDC42BPBQ9Y5S2 1711 aa19.36■□□□□ 0.69
SDHAP1-208ENST00000457601 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
SDHAP1-208ENST00000457601 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
SDHAP1-208ENST00000457601 ARAP3Q8WWN8 1544 aa19.32■□□□□ 0.68
SDHAP1-208ENST00000457601 FGD6Q6ZV73 1430 aa19.31■□□□□ 0.68
SDHAP1-208ENST00000457601 ARHGAP5Q13017 1502 aa19.3■□□□□ 0.68
SDHAP1-208ENST00000457601 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms