RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 SHROOM2Q13796 1616 aa33.79■■■■□ 3
FAM3A-217ENST00000457212 CTTNBP2Q8WZ74 1663 aa33.77■■■■□ 3
FAM3A-217ENST00000457212 IQGAP2Q13576 1575 aa33.75■■■□□ 2.99
FAM3A-217ENST00000457212 GOLGA3Q08378 1498 aa33.75■■■□□ 2.99
FAM3A-217ENST00000457212 JPH4Q96JJ6 628 aa33.74■■■□□ 2.99
FAM3A-217ENST00000457212 ARHGEF11O15085 1522 aa33.71■■■□□ 2.99
FAM3A-217ENST00000457212 RIMBP3CA6NJZ7 1639 aa33.66■■■□□ 2.98
FAM3A-217ENST00000457212 RIMBP3BA6NNM3 1639 aa33.66■■■□□ 2.98
FAM3A-217ENST00000457212 RIMBP3Q9UFD9 1639 aa33.66■■■□□ 2.98
FAM3A-217ENST00000457212 PRG4Q92954 1404 aaPredicted RBP33.63■■■□□ 2.97
FAM3A-217ENST00000457212 UGGT2Q9NYU1 1516 aa33.59■■■□□ 2.97
FAM3A-217ENST00000457212 UBTFP17480 764 aaKnown RBP33.59■■■□□ 2.97
FAM3A-217ENST00000457212 EHMT2Q96KQ7 1210 aa33.57■■■□□ 2.96
FAM3A-217ENST00000457212 ERCC6L2Q5T890 1561 aa33.55■■■□□ 2.96
FAM3A-217ENST00000457212 CARMIL2Q6F5E8 1435 aa33.53■■■□□ 2.96
FAM3A-217ENST00000457212 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
FAM3A-217ENST00000457212 DISP1Q96F81 1524 aa33.46■■■□□ 2.95
FAM3A-217ENST00000457212 KIAA0556O60303 1618 aa33.42■■■□□ 2.94
FAM3A-217ENST00000457212 TNIKQ9UKE5 1360 aa33.4■■■□□ 2.94
FAM3A-217ENST00000457212 SAMD9Q5K651 1589 aa33.36■■■□□ 2.93
FAM3A-217ENST00000457212 CYB5RLQ6IPT4 315 aa33.35■■■□□ 2.93
FAM3A-217ENST00000457212 EFCAB5A4FU69 1503 aa33.33■■■□□ 2.93
FAM3A-217ENST00000457212 PTPRGP23470 1445 aa33.3■■■□□ 2.92
FAM3A-217ENST00000457212 LOC105371045A0A1W2PR82 267 aa33.29■■■□□ 2.92
FAM3A-217ENST00000457212 RANGAP1P46060 587 aaPredicted RBP33.29■■■□□ 2.92
FAM3A-217ENST00000457212 P3H3Q8IVL6 736 aa33.21■■■□□ 2.91
FAM3A-217ENST00000457212 ARHGAP35Q9NRY4 1499 aa33.18■■■□□ 2.9
FAM3A-217ENST00000457212 TTBK1Q5TCY1 1321 aaPredicted RBP33.17■■■□□ 2.9
FAM3A-217ENST00000457212 CLIP1P30622 1438 aa33.14■■■□□ 2.9
FAM3A-217ENST00000457212 FHOD3Q2V2M9 1422 aa33.13■■■□□ 2.89
FAM3A-217ENST00000457212 UACAQ9BZF9 1416 aa33.1■■■□□ 2.89
FAM3A-217ENST00000457212 CEP162Q5TB80 1403 aa33.09■■■□□ 2.89
FAM3A-217ENST00000457212 UHRF1BP1LA0JNW5 1464 aa33.07■■■□□ 2.88
FAM3A-217ENST00000457212 ADCY10Q96PN6 1610 aa33.06■■■□□ 2.88
FAM3A-217ENST00000457212 ABCA8O94911 1581 aa33.04■■■□□ 2.88
FAM3A-217ENST00000457212 ABCC2Q92887 1545 aa33.03■■■□□ 2.88
FAM3A-217ENST00000457212 PLB1Q6P1J6 1458 aa33.02■■■□□ 2.88
FAM3A-217ENST00000457212 FMN1Q68DA7 1419 aa33.01■■■□□ 2.87
FAM3A-217ENST00000457212 NPM1P06748 294 aaKnown RBP eCLIP32.95■■■□□ 2.87
FAM3A-217ENST00000457212 RAPGEF6Q8TEU7 1601 aa32.95■■■□□ 2.86
FAM3A-217ENST00000457212 KDM5BQ9UGL1 1544 aa32.89■■■□□ 2.86
FAM3A-217ENST00000457212 NUP153P49790 1475 aaKnown RBP32.81■■■□□ 2.84
FAM3A-217ENST00000457212 ZCCHC11Q5TAX3 1644 aaKnown RBP32.8■■■□□ 2.84
FAM3A-217ENST00000457212 MAPKBP1O60336 1514 aa32.8■■■□□ 2.84
FAM3A-217ENST00000457212 CASKIN1Q8WXD9 1431 aa32.78■■■□□ 2.84
FAM3A-217ENST00000457212 HECW1Q76N89 1606 aa32.78■■■□□ 2.84
FAM3A-217ENST00000457212 ATP10BO94823 1461 aa32.76■■■□□ 2.84
FAM3A-217ENST00000457212 PCF11O94913 1555 aaKnown RBP32.75■■■□□ 2.83
FAM3A-217ENST00000457212 FYCO1Q9BQS8 1478 aa32.74■■■□□ 2.83
FAM3A-217ENST00000457212 ATP1B4Q9UN42 357 aaPredicted RBP32.7■■■□□ 2.83
FAM3A-217ENST00000457212 ARID3CA6NKF2 412 aa32.68■■■□□ 2.82
FAM3A-217ENST00000457212 ASXL2Q76L83 1435 aa32.68■■■□□ 2.82
FAM3A-217ENST00000457212 VPS8Q8N3P4 1428 aa32.68■■■□□ 2.82
FAM3A-217ENST00000457212 EPRSP07814 1512 aaKnown RBP32.67■■■□□ 2.82
FAM3A-217ENST00000457212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.64■■■□□ 2.82
FAM3A-217ENST00000457212 HNRNPUL2Q1KMD3 747 aaKnown RBP32.64■■■□□ 2.82
FAM3A-217ENST00000457212 CCDC18Q5T9S5 1454 aa32.62■■■□□ 2.81
FAM3A-217ENST00000457212 CDK13Q14004 1512 aaKnown RBP32.6■■■□□ 2.81
FAM3A-217ENST00000457212 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
FAM3A-217ENST00000457212 LRRIQ1Q96JM4 1722 aa32.59■■■□□ 2.81
FAM3A-217ENST00000457212 ABCC10Q5T3U5 1492 aa32.57■■■□□ 2.8
FAM3A-217ENST00000457212 PLEKHD1A6NEE1 506 aa32.54■■■□□ 2.8
FAM3A-217ENST00000457212 TRHP20396 242 aaPredicted RBP32.53■■■□□ 2.8
FAM3A-217ENST00000457212 CDK11AQ9UQ88 783 aaPredicted RBP32.53■■■□□ 2.8
FAM3A-217ENST00000457212 DIP2BQ9P265 1576 aa32.52■■■□□ 2.8
FAM3A-217ENST00000457212 KIF13AQ9H1H9 1805 aa32.47■■■□□ 2.79
FAM3A-217ENST00000457212 GLI2P10070 1586 aa32.47■■■□□ 2.79
FAM3A-217ENST00000457212 FAM69CQ0P6D2 419 aa32.46■■■□□ 2.79
FAM3A-217ENST00000457212 KCNH8Q96L42 1107 aa32.43■■■□□ 2.78
FAM3A-217ENST00000457212 TROQ12816 1431 aaPredicted RBP32.4■■■□□ 2.78
FAM3A-217ENST00000457212 MAP3K1Q13233 1512 aa32.39■■■□□ 2.78
FAM3A-217ENST00000457212 CFAP43Q8NDM7 1665 aa32.39■■■□□ 2.78
FAM3A-217ENST00000457212 TIAM1Q13009 1591 aa32.36■■■□□ 2.77
FAM3A-217ENST00000457212 MAGI3Q5TCQ9 1506 aa32.33■■■□□ 2.77
FAM3A-217ENST00000457212 APLP2Q06481 763 aa32.32■■■□□ 2.76
FAM3A-217ENST00000457212 ABCA9Q8IUA7 1624 aa32.32■■■□□ 2.76
FAM3A-217ENST00000457212 MAP3K4Q9Y6R4 1608 aa32.32■■■□□ 2.76
FAM3A-217ENST00000457212 MTUS2Q5JR59 1369 aa32.3■■■□□ 2.76
FAM3A-217ENST00000457212 KIF14Q15058 1648 aa32.29■■■□□ 2.76
FAM3A-217ENST00000457212 EHBP1L1Q8N3D4 1523 aa32.27■■■□□ 2.76
FAM3A-217ENST00000457212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.26■■■□□ 2.75
FAM3A-217ENST00000457212 CD109Q6YHK3 1445 aa32.25■■■□□ 2.75
FAM3A-217ENST00000457212 LRRC9Q6ZRR7 1453 aa32.22■■■□□ 2.75
FAM3A-217ENST00000457212 TSPOAP1O95153 1857 aa32.2■■■□□ 2.74
FAM3A-217ENST00000457212 TTC37Q6PGP7 1564 aa32.19■■■□□ 2.74
FAM3A-217ENST00000457212 TEX14Q8IWB6 1497 aa32.16■■■□□ 2.74
FAM3A-217ENST00000457212 PPRC1Q5VV67 1664 aaKnown RBP32.16■■■□□ 2.74
FAM3A-217ENST00000457212 KANK4Q5T7N3 995 aaPredicted RBP32.13■■■□□ 2.73
FAM3A-217ENST00000457212 SUPT6HQ7KZ85 1726 aaKnown RBP32.12■■■□□ 2.73
FAM3A-217ENST00000457212 MYO5CQ9NQX4 1742 aa32.11■■■□□ 2.73
FAM3A-217ENST00000457212 PLCH2O75038 1416 aa32.09■■■□□ 2.73
FAM3A-217ENST00000457212 ARAP3Q8WWN8 1544 aa32.09■■■□□ 2.73
FAM3A-217ENST00000457212 NCOA2Q15596 1464 aa32.05■■■□□ 2.72
FAM3A-217ENST00000457212 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
FAM3A-217ENST00000457212 PHLDB1Q86UU1 1377 aa32.03■■■□□ 2.72
FAM3A-217ENST00000457212 NEO1Q92859 1461 aa32.03■■■□□ 2.72
FAM3A-217ENST00000457212 PREX2Q70Z35 1606 aa32.02■■■□□ 2.72
FAM3A-217ENST00000457212 CDC42BPAQ5VT25 1732 aa32.02■■■□□ 2.72
FAM3A-217ENST00000457212 CFAP74Q9C0B2 1584 aa32.02■■■□□ 2.72
FAM3A-217ENST00000457212 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms