RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 SHROOM2Q13796 1616 aa14.35□□□□□ -0.11
SP140-207ENST00000456542 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
SP140-207ENST00000456542 EEA1Q15075 1411 aa14.31□□□□□ -0.12
SP140-207ENST00000456542 KIAA0586Q9BVV6 1533 aa14.31□□□□□ -0.12
SP140-207ENST00000456542 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
SP140-207ENST00000456542 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
SP140-207ENST00000456542 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
SP140-207ENST00000456542 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
SP140-207ENST00000456542 IQGAP2Q13576 1575 aa14.24□□□□□ -0.13
SP140-207ENST00000456542 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
SP140-207ENST00000456542 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
SP140-207ENST00000456542 CTTNBP2Q8WZ74 1663 aa14.23□□□□□ -0.13
SP140-207ENST00000456542 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
SP140-207ENST00000456542 KIF21BO75037 1637 aa14.17□□□□□ -0.14
SP140-207ENST00000456542 UGGT2Q9NYU1 1516 aa14.16□□□□□ -0.14
SP140-207ENST00000456542 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
SP140-207ENST00000456542 FAM9AQ8IZU1 332 aaPredicted RBP14.12□□□□□ -0.15
SP140-207ENST00000456542 DISP1Q96F81 1524 aa14.11□□□□□ -0.15
SP140-207ENST00000456542 KIAA0556O60303 1618 aa14.11□□□□□ -0.15
SP140-207ENST00000456542 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
SP140-207ENST00000456542 GOLGA3Q08378 1498 aa14.08□□□□□ -0.16
SP140-207ENST00000456542 PTPRGP23470 1445 aa14.07□□□□□ -0.16
SP140-207ENST00000456542 ADCY10Q96PN6 1610 aa14.04□□□□□ -0.16
SP140-207ENST00000456542 SAMD9Q5K651 1589 aa14.02□□□□□ -0.16
SP140-207ENST00000456542 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
SP140-207ENST00000456542 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
SP140-207ENST00000456542 ABCC2Q92887 1545 aa13.98□□□□□ -0.17
SP140-207ENST00000456542 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
SP140-207ENST00000456542 MAPKBP1O60336 1514 aa13.97□□□□□ -0.17
SP140-207ENST00000456542 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
SP140-207ENST00000456542 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SP140-207ENST00000456542 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
SP140-207ENST00000456542 ABCA8O94911 1581 aa13.94□□□□□ -0.18
SP140-207ENST00000456542 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
SP140-207ENST00000456542 PLB1Q6P1J6 1458 aa13.92□□□□□ -0.18
SP140-207ENST00000456542 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
SP140-207ENST00000456542 KIF13AQ9H1H9 1805 aa13.9□□□□□ -0.18
SP140-207ENST00000456542 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
SP140-207ENST00000456542 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.19
SP140-207ENST00000456542 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
SP140-207ENST00000456542 FHOD3Q2V2M9 1422 aa13.89□□□□□ -0.19
SP140-207ENST00000456542 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
SP140-207ENST00000456542 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
SP140-207ENST00000456542 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
SP140-207ENST00000456542 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
SP140-207ENST00000456542 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
SP140-207ENST00000456542 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
SP140-207ENST00000456542 FMN1Q68DA7 1419 aa13.82□□□□□ -0.2
SP140-207ENST00000456542 GLI2P10070 1586 aa13.81□□□□□ -0.2
SP140-207ENST00000456542 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
SP140-207ENST00000456542 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
SP140-207ENST00000456542 FOXD1Q16676 465 aa13.8□□□□□ -0.2
SP140-207ENST00000456542 ATP10BO94823 1461 aa13.8□□□□□ -0.2
SP140-207ENST00000456542 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
SP140-207ENST00000456542 CLIP1P30622 1438 aa13.79□□□□□ -0.2
SP140-207ENST00000456542 EPRSP07814 1512 aaKnown RBP13.78□□□□□ -0.2
SP140-207ENST00000456542 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
SP140-207ENST00000456542 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
SP140-207ENST00000456542 TSPOAP1O95153 1857 aa13.74□□□□□ -0.21
SP140-207ENST00000456542 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
SP140-207ENST00000456542 CFAP43Q8NDM7 1665 aa13.72□□□□□ -0.21
SP140-207ENST00000456542 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
SP140-207ENST00000456542 PPRC1Q5VV67 1664 aaKnown RBP13.72□□□□□ -0.21
SP140-207ENST00000456542 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.21
SP140-207ENST00000456542 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
SP140-207ENST00000456542 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
SP140-207ENST00000456542 LRRIQ1Q96JM4 1722 aa13.7□□□□□ -0.22
SP140-207ENST00000456542 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
SP140-207ENST00000456542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
SP140-207ENST00000456542 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
SP140-207ENST00000456542 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
SP140-207ENST00000456542 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
SP140-207ENST00000456542 CCDC18Q5T9S5 1454 aa13.67□□□□□ -0.22
SP140-207ENST00000456542 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
SP140-207ENST00000456542 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
SP140-207ENST00000456542 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
SP140-207ENST00000456542 CD109Q6YHK3 1445 aa13.65□□□□□ -0.22
SP140-207ENST00000456542 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
SP140-207ENST00000456542 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
SP140-207ENST00000456542 KDM6BO15054 1643 aa13.64□□□□□ -0.23
SP140-207ENST00000456542 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
SP140-207ENST00000456542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.23
SP140-207ENST00000456542 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
SP140-207ENST00000456542 KIF14Q15058 1648 aa13.6□□□□□ -0.23
SP140-207ENST00000456542 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
SP140-207ENST00000456542 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
SP140-207ENST00000456542 NEO1Q92859 1461 aa13.56□□□□□ -0.24
SP140-207ENST00000456542 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
SP140-207ENST00000456542 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
SP140-207ENST00000456542 CFAP74Q9C0B2 1584 aa13.55□□□□□ -0.24
SP140-207ENST00000456542 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
SP140-207ENST00000456542 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
SP140-207ENST00000456542 PLCH2O75038 1416 aa13.52□□□□□ -0.25
SP140-207ENST00000456542 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
SP140-207ENST00000456542 FANCAO15360 1455 aa13.51□□□□□ -0.25
SP140-207ENST00000456542 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
SP140-207ENST00000456542 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
SP140-207ENST00000456542 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
SP140-207ENST00000456542 CDC42BPAQ5VT25 1732 aa13.49□□□□□ -0.25
SP140-207ENST00000456542 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms