RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
SYPL1-202ENST00000455385 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
SYPL1-202ENST00000455385 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
SYPL1-202ENST00000455385 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
SYPL1-202ENST00000455385 CTTNBP2Q8WZ74 1663 aa17.44■□□□□ 0.38
SYPL1-202ENST00000455385 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
SYPL1-202ENST00000455385 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
SYPL1-202ENST00000455385 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
SYPL1-202ENST00000455385 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
SYPL1-202ENST00000455385 UGGT2Q9NYU1 1516 aa17.34■□□□□ 0.37
SYPL1-202ENST00000455385 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.37
SYPL1-202ENST00000455385 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
SYPL1-202ENST00000455385 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
SYPL1-202ENST00000455385 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
SYPL1-202ENST00000455385 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
SYPL1-202ENST00000455385 CLIP1P30622 1438 aa17.28■□□□□ 0.36
SYPL1-202ENST00000455385 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
SYPL1-202ENST00000455385 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
SYPL1-202ENST00000455385 CARMIL2Q6F5E8 1435 aa17.26■□□□□ 0.35
SYPL1-202ENST00000455385 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
SYPL1-202ENST00000455385 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
SYPL1-202ENST00000455385 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
SYPL1-202ENST00000455385 EFCAB5A4FU69 1503 aa17.22■□□□□ 0.35
SYPL1-202ENST00000455385 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
SYPL1-202ENST00000455385 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
SYPL1-202ENST00000455385 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
SYPL1-202ENST00000455385 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
SYPL1-202ENST00000455385 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
SYPL1-202ENST00000455385 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
SYPL1-202ENST00000455385 PTPRGP23470 1445 aa17.17■□□□□ 0.34
SYPL1-202ENST00000455385 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
SYPL1-202ENST00000455385 PLB1Q6P1J6 1458 aa17.1■□□□□ 0.33
SYPL1-202ENST00000455385 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
SYPL1-202ENST00000455385 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
SYPL1-202ENST00000455385 ABCA8O94911 1581 aa17.06■□□□□ 0.32
SYPL1-202ENST00000455385 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
SYPL1-202ENST00000455385 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
SYPL1-202ENST00000455385 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
SYPL1-202ENST00000455385 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.31
SYPL1-202ENST00000455385 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
SYPL1-202ENST00000455385 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
SYPL1-202ENST00000455385 ADCY10Q96PN6 1610 aa17■□□□□ 0.31
SYPL1-202ENST00000455385 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
SYPL1-202ENST00000455385 ABCC2Q92887 1545 aa17■□□□□ 0.31
SYPL1-202ENST00000455385 NUP153P49790 1475 aaKnown RBP17■□□□□ 0.31
SYPL1-202ENST00000455385 FYCO1Q9BQS8 1478 aa16.97■□□□□ 0.31
SYPL1-202ENST00000455385 ATP10BO94823 1461 aa16.95■□□□□ 0.3
SYPL1-202ENST00000455385 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
SYPL1-202ENST00000455385 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
SYPL1-202ENST00000455385 EPRSP07814 1512 aaKnown RBP16.94■□□□□ 0.3
SYPL1-202ENST00000455385 KDM5BQ9UGL1 1544 aa16.94■□□□□ 0.3
SYPL1-202ENST00000455385 CDK13Q14004 1512 aaKnown RBP16.92■□□□□ 0.3
SYPL1-202ENST00000455385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
SYPL1-202ENST00000455385 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
SYPL1-202ENST00000455385 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
SYPL1-202ENST00000455385 ZCCHC11Q5TAX3 1644 aaKnown RBP16.89■□□□□ 0.29
SYPL1-202ENST00000455385 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
SYPL1-202ENST00000455385 KANK4Q5T7N3 995 aaPredicted RBP16.85■□□□□ 0.29
SYPL1-202ENST00000455385 APLP2Q06481 763 aa16.85■□□□□ 0.29
SYPL1-202ENST00000455385 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
SYPL1-202ENST00000455385 MAP3K1Q13233 1512 aa16.83■□□□□ 0.28
SYPL1-202ENST00000455385 MAGI3Q5TCQ9 1506 aa16.83■□□□□ 0.28
SYPL1-202ENST00000455385 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
SYPL1-202ENST00000455385 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
SYPL1-202ENST00000455385 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
SYPL1-202ENST00000455385 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
SYPL1-202ENST00000455385 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
SYPL1-202ENST00000455385 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
SYPL1-202ENST00000455385 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
SYPL1-202ENST00000455385 LRRC9Q6ZRR7 1453 aa16.78■□□□□ 0.28
SYPL1-202ENST00000455385 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
SYPL1-202ENST00000455385 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
SYPL1-202ENST00000455385 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.28
SYPL1-202ENST00000455385 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
SYPL1-202ENST00000455385 KIF14Q15058 1648 aa16.71■□□□□ 0.27
SYPL1-202ENST00000455385 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
SYPL1-202ENST00000455385 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
SYPL1-202ENST00000455385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.67■□□□□ 0.26
SYPL1-202ENST00000455385 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
SYPL1-202ENST00000455385 DIP2BQ9P265 1576 aa16.66■□□□□ 0.26
SYPL1-202ENST00000455385 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
SYPL1-202ENST00000455385 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
SYPL1-202ENST00000455385 GLI2P10070 1586 aa16.64■□□□□ 0.25
SYPL1-202ENST00000455385 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
SYPL1-202ENST00000455385 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
SYPL1-202ENST00000455385 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
SYPL1-202ENST00000455385 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
SYPL1-202ENST00000455385 GPATCH8Q9UKJ3 1502 aaKnown RBP16.61■□□□□ 0.25
SYPL1-202ENST00000455385 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
SYPL1-202ENST00000455385 CD109Q6YHK3 1445 aa16.61■□□□□ 0.25
SYPL1-202ENST00000455385 PLCH2O75038 1416 aa16.58■□□□□ 0.25
SYPL1-202ENST00000455385 MAP3K4Q9Y6R4 1608 aa16.58■□□□□ 0.24
SYPL1-202ENST00000455385 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
SYPL1-202ENST00000455385 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
SYPL1-202ENST00000455385 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
SYPL1-202ENST00000455385 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
SYPL1-202ENST00000455385 MYO5CQ9NQX4 1742 aa16.55■□□□□ 0.24
SYPL1-202ENST00000455385 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
SYPL1-202ENST00000455385 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
SYPL1-202ENST00000455385 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms