RNA–Protein interactions for RNA: ENST00000455371.5

PITRM1-208, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2

Gene PITRM1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-208ENST00000455371 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
PITRM1-208ENST00000455371 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
PITRM1-208ENST00000455371 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
PITRM1-208ENST00000455371 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
PITRM1-208ENST00000455371 PRG4Q92954 1404 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-208ENST00000455371 KIAA0586Q9BVV6 1533 aa13.1□□□□□ -0.31
PITRM1-208ENST00000455371 ADCY10Q96PN6 1610 aa13.09□□□□□ -0.31
PITRM1-208ENST00000455371 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
PITRM1-208ENST00000455371 SENP3Q9H4L4 574 aaPredicted RBP13.07□□□□□ -0.32
PITRM1-208ENST00000455371 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
PITRM1-208ENST00000455371 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
PITRM1-208ENST00000455371 KIF13AQ9H1H9 1805 aa13.04□□□□□ -0.32
PITRM1-208ENST00000455371 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
PITRM1-208ENST00000455371 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
PITRM1-208ENST00000455371 KIF21BO75037 1637 aa13.01□□□□□ -0.33
PITRM1-208ENST00000455371 JPH4Q96JJ6 628 aa13□□□□□ -0.33
PITRM1-208ENST00000455371 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
PITRM1-208ENST00000455371 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
PITRM1-208ENST00000455371 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
PITRM1-208ENST00000455371 EEA1Q15075 1411 aa12.93□□□□□ -0.34
PITRM1-208ENST00000455371 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
PITRM1-208ENST00000455371 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
PITRM1-208ENST00000455371 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
PITRM1-208ENST00000455371 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
PITRM1-208ENST00000455371 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
PITRM1-208ENST00000455371 TNIKQ9UKE5 1360 aa12.89□□□□□ -0.35
PITRM1-208ENST00000455371 ABCA8O94911 1581 aa12.89□□□□□ -0.35
PITRM1-208ENST00000455371 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
PITRM1-208ENST00000455371 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
PITRM1-208ENST00000455371 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
PITRM1-208ENST00000455371 PTPRGP23470 1445 aa12.88□□□□□ -0.35
PITRM1-208ENST00000455371 PLB1Q6P1J6 1458 aa12.87□□□□□ -0.35
PITRM1-208ENST00000455371 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
PITRM1-208ENST00000455371 UHRF1BP1LA0JNW5 1464 aa12.84□□□□□ -0.35
PITRM1-208ENST00000455371 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
PITRM1-208ENST00000455371 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
PITRM1-208ENST00000455371 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
PITRM1-208ENST00000455371 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
PITRM1-208ENST00000455371 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
PITRM1-208ENST00000455371 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
PITRM1-208ENST00000455371 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
PITRM1-208ENST00000455371 KDM5BQ9UGL1 1544 aa12.81□□□□□ -0.36
PITRM1-208ENST00000455371 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
PITRM1-208ENST00000455371 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
PITRM1-208ENST00000455371 MAP3K4Q9Y6R4 1608 aa12.78□□□□□ -0.36
PITRM1-208ENST00000455371 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
PITRM1-208ENST00000455371 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
PITRM1-208ENST00000455371 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-208ENST00000455371 ARHGAP35Q9NRY4 1499 aa12.74□□□□□ -0.37
PITRM1-208ENST00000455371 GLI2P10070 1586 aa12.73□□□□□ -0.37
PITRM1-208ENST00000455371 NUP153P49790 1475 aaKnown RBP12.73□□□□□ -0.37
PITRM1-208ENST00000455371 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
PITRM1-208ENST00000455371 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
PITRM1-208ENST00000455371 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
PITRM1-208ENST00000455371 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.38
PITRM1-208ENST00000455371 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
PITRM1-208ENST00000455371 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
PITRM1-208ENST00000455371 KDM6BO15054 1643 aa12.7□□□□□ -0.38
PITRM1-208ENST00000455371 ATP10BO94823 1461 aa12.69□□□□□ -0.38
PITRM1-208ENST00000455371 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
PITRM1-208ENST00000455371 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
PITRM1-208ENST00000455371 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
PITRM1-208ENST00000455371 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
PITRM1-208ENST00000455371 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
PITRM1-208ENST00000455371 KIF14Q15058 1648 aa12.63□□□□□ -0.39
PITRM1-208ENST00000455371 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
PITRM1-208ENST00000455371 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
PITRM1-208ENST00000455371 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
PITRM1-208ENST00000455371 FRMPD1Q5SYB0 1578 aa12.58□□□□□ -0.4
PITRM1-208ENST00000455371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.4
PITRM1-208ENST00000455371 CLIP1P30622 1438 aa12.57□□□□□ -0.4
PITRM1-208ENST00000455371 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
PITRM1-208ENST00000455371 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
PITRM1-208ENST00000455371 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
PITRM1-208ENST00000455371 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
PITRM1-208ENST00000455371 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
PITRM1-208ENST00000455371 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
PITRM1-208ENST00000455371 CD109Q6YHK3 1445 aa12.53□□□□□ -0.4
PITRM1-208ENST00000455371 CDC42BPAQ5VT25 1732 aa12.52□□□□□ -0.41
PITRM1-208ENST00000455371 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
PITRM1-208ENST00000455371 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
PITRM1-208ENST00000455371 CDC42BPBQ9Y5S2 1711 aa12.51□□□□□ -0.41
PITRM1-208ENST00000455371 PREX2Q70Z35 1606 aa12.5□□□□□ -0.41
PITRM1-208ENST00000455371 SIGLEC1Q9BZZ2 1709 aa12.5□□□□□ -0.41
PITRM1-208ENST00000455371 CFAP74Q9C0B2 1584 aa12.49□□□□□ -0.41
PITRM1-208ENST00000455371 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.41
PITRM1-208ENST00000455371 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
PITRM1-208ENST00000455371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
PITRM1-208ENST00000455371 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
PITRM1-208ENST00000455371 TROQ12816 1431 aaPredicted RBP12.45□□□□□ -0.42
PITRM1-208ENST00000455371 ARHGEF40Q8TER5 1519 aa12.44□□□□□ -0.42
PITRM1-208ENST00000455371 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
PITRM1-208ENST00000455371 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
PITRM1-208ENST00000455371 FANCAO15360 1455 aa12.43□□□□□ -0.42
PITRM1-208ENST00000455371 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
PITRM1-208ENST00000455371 NEO1Q92859 1461 aa12.42□□□□□ -0.42
PITRM1-208ENST00000455371 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
PITRM1-208ENST00000455371 ZMYM4Q5VZL5 1548 aa12.41□□□□□ -0.42
PITRM1-208ENST00000455371 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
PITRM1-208ENST00000455371 ABCC1P33527 1531 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms