RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CTTNBP2Q8WZ74 1663 aa26.98■■□□□ 1.91
CCDC90B-202ENST00000455220 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
CCDC90B-202ENST00000455220 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
CCDC90B-202ENST00000455220 KIAA0586Q9BVV6 1533 aa26.94■■□□□ 1.9
CCDC90B-202ENST00000455220 IQGAP2Q13576 1575 aa26.89■■□□□ 1.89
CCDC90B-202ENST00000455220 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
CCDC90B-202ENST00000455220 OSCARQ8IYS5 282 aa26.86■■□□□ 1.89
CCDC90B-202ENST00000455220 UGGT2Q9NYU1 1516 aa26.77■■□□□ 1.88
CCDC90B-202ENST00000455220 SHROOM2Q13796 1616 aa26.77■■□□□ 1.88
CCDC90B-202ENST00000455220 CEP162Q5TB80 1403 aa26.75■■□□□ 1.87
CCDC90B-202ENST00000455220 JPH4Q96JJ6 628 aa26.73■■□□□ 1.87
CCDC90B-202ENST00000455220 SAMD9Q5K651 1589 aa26.7■■□□□ 1.86
CCDC90B-202ENST00000455220 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
CCDC90B-202ENST00000455220 CLIP1P30622 1438 aa26.69■■□□□ 1.86
CCDC90B-202ENST00000455220 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
CCDC90B-202ENST00000455220 DISP1Q96F81 1524 aa26.66■■□□□ 1.86
CCDC90B-202ENST00000455220 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
CCDC90B-202ENST00000455220 PRG4Q92954 1404 aaPredicted RBP26.63■■□□□ 1.85
CCDC90B-202ENST00000455220 KIAA0556O60303 1618 aa26.63■■□□□ 1.85
CCDC90B-202ENST00000455220 CARMIL2Q6F5E8 1435 aa26.6■■□□□ 1.85
CCDC90B-202ENST00000455220 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
CCDC90B-202ENST00000455220 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
CCDC90B-202ENST00000455220 FHOD3Q2V2M9 1422 aa26.53■■□□□ 1.84
CCDC90B-202ENST00000455220 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
CCDC90B-202ENST00000455220 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
CCDC90B-202ENST00000455220 FMN1Q68DA7 1419 aa26.42■■□□□ 1.82
CCDC90B-202ENST00000455220 PTPRGP23470 1445 aa26.39■■□□□ 1.82
CCDC90B-202ENST00000455220 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.82
CCDC90B-202ENST00000455220 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.82
CCDC90B-202ENST00000455220 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.82
CCDC90B-202ENST00000455220 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.82
CCDC90B-202ENST00000455220 ABCA8O94911 1581 aa26.3■■□□□ 1.8
CCDC90B-202ENST00000455220 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
CCDC90B-202ENST00000455220 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
CCDC90B-202ENST00000455220 CASKIN1Q8WXD9 1431 aa26.29■■□□□ 1.8
CCDC90B-202ENST00000455220 PLB1Q6P1J6 1458 aa26.28■■□□□ 1.8
CCDC90B-202ENST00000455220 RAPGEF6Q8TEU7 1601 aa26.28■■□□□ 1.8
CCDC90B-202ENST00000455220 FYCO1Q9BQS8 1478 aa26.27■■□□□ 1.8
CCDC90B-202ENST00000455220 UACAQ9BZF9 1416 aa26.26■■□□□ 1.79
CCDC90B-202ENST00000455220 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
CCDC90B-202ENST00000455220 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
CCDC90B-202ENST00000455220 ABCC2Q92887 1545 aa26.21■■□□□ 1.79
CCDC90B-202ENST00000455220 NUP153P49790 1475 aaKnown RBP26.19■■□□□ 1.78
CCDC90B-202ENST00000455220 ADCY10Q96PN6 1610 aa26.16■■□□□ 1.78
CCDC90B-202ENST00000455220 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.78
CCDC90B-202ENST00000455220 EPRSP07814 1512 aaKnown RBP26.13■■□□□ 1.77
CCDC90B-202ENST00000455220 CYB5RLQ6IPT4 315 aa26.12■■□□□ 1.77
CCDC90B-202ENST00000455220 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
CCDC90B-202ENST00000455220 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
CCDC90B-202ENST00000455220 MAP3K1Q13233 1512 aa26.1■■□□□ 1.77
CCDC90B-202ENST00000455220 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
CCDC90B-202ENST00000455220 ATP10BO94823 1461 aa26.07■■□□□ 1.76
CCDC90B-202ENST00000455220 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
CCDC90B-202ENST00000455220 CDK13Q14004 1512 aaKnown RBP26.06■■□□□ 1.76
CCDC90B-202ENST00000455220 TIAM1Q13009 1591 aa26.06■■□□□ 1.76
CCDC90B-202ENST00000455220 ZCCHC11Q5TAX3 1644 aaKnown RBP26.03■■□□□ 1.76
CCDC90B-202ENST00000455220 ARID3CA6NKF2 412 aa26■■□□□ 1.75
CCDC90B-202ENST00000455220 APLP2Q06481 763 aa26■■□□□ 1.75
CCDC90B-202ENST00000455220 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
CCDC90B-202ENST00000455220 LRRC9Q6ZRR7 1453 aa25.93■■□□□ 1.74
CCDC90B-202ENST00000455220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.93■■□□□ 1.74
CCDC90B-202ENST00000455220 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
CCDC90B-202ENST00000455220 NPM1P06748 294 aaKnown RBP eCLIP25.92■■□□□ 1.74
CCDC90B-202ENST00000455220 CDK11AQ9UQ88 783 aaPredicted RBP25.91■■□□□ 1.74
CCDC90B-202ENST00000455220 KANK4Q5T7N3 995 aaPredicted RBP25.9■■□□□ 1.74
CCDC90B-202ENST00000455220 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
CCDC90B-202ENST00000455220 MAPKBP1O60336 1514 aa25.88■■□□□ 1.73
CCDC90B-202ENST00000455220 TROQ12816 1431 aaPredicted RBP25.88■■□□□ 1.73
CCDC90B-202ENST00000455220 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
CCDC90B-202ENST00000455220 PLEKHD1A6NEE1 506 aa25.86■■□□□ 1.73
CCDC90B-202ENST00000455220 ASXL2Q76L83 1435 aa25.85■■□□□ 1.73
CCDC90B-202ENST00000455220 WDR7Q9Y4E6 1490 aa25.84■■□□□ 1.73
CCDC90B-202ENST00000455220 SUPT6HQ7KZ85 1726 aaKnown RBP25.78■■□□□ 1.72
CCDC90B-202ENST00000455220 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
CCDC90B-202ENST00000455220 KIF14Q15058 1648 aa25.76■■□□□ 1.71
CCDC90B-202ENST00000455220 NCOA2Q15596 1464 aa25.74■■□□□ 1.71
CCDC90B-202ENST00000455220 ABCC10Q5T3U5 1492 aa25.71■■□□□ 1.71
CCDC90B-202ENST00000455220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.69■■□□□ 1.7
CCDC90B-202ENST00000455220 KCNH8Q96L42 1107 aa25.68■■□□□ 1.7
CCDC90B-202ENST00000455220 TTC37Q6PGP7 1564 aa25.66■■□□□ 1.7
CCDC90B-202ENST00000455220 ABCA9Q8IUA7 1624 aa25.66■■□□□ 1.7
CCDC90B-202ENST00000455220 DIP2BQ9P265 1576 aa25.65■■□□□ 1.7
CCDC90B-202ENST00000455220 GLI2P10070 1586 aa25.64■■□□□ 1.7
CCDC90B-202ENST00000455220 PHLDB1Q86UU1 1377 aa25.64■■□□□ 1.7
CCDC90B-202ENST00000455220 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
CCDC90B-202ENST00000455220 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
CCDC90B-202ENST00000455220 GPATCH8Q9UKJ3 1502 aaKnown RBP25.6■■□□□ 1.69
CCDC90B-202ENST00000455220 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
CCDC90B-202ENST00000455220 ITSN2Q9NZM3 1697 aa25.58■■□□□ 1.69
CCDC90B-202ENST00000455220 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
CCDC90B-202ENST00000455220 PREX2Q70Z35 1606 aa25.56■■□□□ 1.68
CCDC90B-202ENST00000455220 KIF13AQ9H1H9 1805 aa25.56■■□□□ 1.68
CCDC90B-202ENST00000455220 MAP3K4Q9Y6R4 1608 aa25.55■■□□□ 1.68
CCDC90B-202ENST00000455220 ARAP3Q8WWN8 1544 aa25.54■■□□□ 1.68
CCDC90B-202ENST00000455220 PLCH2O75038 1416 aa25.53■■□□□ 1.68
CCDC90B-202ENST00000455220 CDC42BPBQ9Y5S2 1711 aa25.53■■□□□ 1.68
CCDC90B-202ENST00000455220 MIA2Q96PC5 1412 aa25.52■■□□□ 1.68
CCDC90B-202ENST00000455220 FAM69CQ0P6D2 419 aa25.52■■□□□ 1.68
CCDC90B-202ENST00000455220 FGD6Q6ZV73 1430 aa25.52■■□□□ 1.68
CCDC90B-202ENST00000455220 CD109Q6YHK3 1445 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms