RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
XPC-204ENST00000455144 GRIN2AQ12879 1464 aa12.02□□□□□ -0.49
XPC-204ENST00000455144 PPP4R3CPQ6ZMV5 832 aa12.01□□□□□ -0.49
XPC-204ENST00000455144 CUL7Q14999 1698 aa12□□□□□ -0.49
XPC-204ENST00000455144 NUP160Q12769 1436 aa11.95□□□□□ -0.5
XPC-204ENST00000455144 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
XPC-204ENST00000455144 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
XPC-204ENST00000455144 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
XPC-204ENST00000455144 IGF1RP08069 1367 aa11.92□□□□□ -0.5
XPC-204ENST00000455144 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
XPC-204ENST00000455144 SHROOM2Q13796 1616 aa11.9□□□□□ -0.5
XPC-204ENST00000455144 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
XPC-204ENST00000455144 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
XPC-204ENST00000455144 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
XPC-204ENST00000455144 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
XPC-204ENST00000455144 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
XPC-204ENST00000455144 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
XPC-204ENST00000455144 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
XPC-204ENST00000455144 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
XPC-204ENST00000455144 CARMIL2Q6F5E8 1435 aa11.79□□□□□ -0.52
XPC-204ENST00000455144 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
XPC-204ENST00000455144 EEA1Q15075 1411 aa11.78□□□□□ -0.52
XPC-204ENST00000455144 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
XPC-204ENST00000455144 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.53
XPC-204ENST00000455144 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
XPC-204ENST00000455144 CTTNBP2Q8WZ74 1663 aa11.77□□□□□ -0.53
XPC-204ENST00000455144 NPM1P06748 294 aaKnown RBP eCLIP11.76□□□□□ -0.53
XPC-204ENST00000455144 FAM9AQ8IZU1 332 aaPredicted RBP11.74□□□□□ -0.53
XPC-204ENST00000455144 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
XPC-204ENST00000455144 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
XPC-204ENST00000455144 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
XPC-204ENST00000455144 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
XPC-204ENST00000455144 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
XPC-204ENST00000455144 PTPRGP23470 1445 aa11.7□□□□□ -0.54
XPC-204ENST00000455144 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
XPC-204ENST00000455144 MAPKBP1O60336 1514 aa11.65□□□□□ -0.55
XPC-204ENST00000455144 KIAA0556O60303 1618 aa11.64□□□□□ -0.55
XPC-204ENST00000455144 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
XPC-204ENST00000455144 DISP1Q96F81 1524 aa11.64□□□□□ -0.55
XPC-204ENST00000455144 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
XPC-204ENST00000455144 UHRF1BP1LA0JNW5 1464 aa11.63□□□□□ -0.55
XPC-204ENST00000455144 NPM3O75607 178 aaKnown RBP11.62□□□□□ -0.55
XPC-204ENST00000455144 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
XPC-204ENST00000455144 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
XPC-204ENST00000455144 UACAQ9BZF9 1416 aa11.61□□□□□ -0.55
XPC-204ENST00000455144 KIF21BO75037 1637 aa11.61□□□□□ -0.55
XPC-204ENST00000455144 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
XPC-204ENST00000455144 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
XPC-204ENST00000455144 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
XPC-204ENST00000455144 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
XPC-204ENST00000455144 FAM69CQ0P6D2 419 aa11.56□□□□□ -0.56
XPC-204ENST00000455144 DIP2BQ9P265 1576 aa11.55□□□□□ -0.56
XPC-204ENST00000455144 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
XPC-204ENST00000455144 SAMD9Q5K651 1589 aa11.54□□□□□ -0.56
XPC-204ENST00000455144 EFCAB5A4FU69 1503 aa11.53□□□□□ -0.56
XPC-204ENST00000455144 ZCCHC11Q5TAX3 1644 aaKnown RBP11.53□□□□□ -0.56
XPC-204ENST00000455144 UBTFP17480 764 aaKnown RBP11.52□□□□□ -0.57
XPC-204ENST00000455144 ABCA8O94911 1581 aa11.52□□□□□ -0.57
XPC-204ENST00000455144 ASXL2Q76L83 1435 aa11.52□□□□□ -0.57
XPC-204ENST00000455144 GLI2P10070 1586 aa11.51□□□□□ -0.57
XPC-204ENST00000455144 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
XPC-204ENST00000455144 RAPGEF6Q8TEU7 1601 aa11.48□□□□□ -0.57
XPC-204ENST00000455144 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
XPC-204ENST00000455144 WDR7Q9Y4E6 1490 aa11.46□□□□□ -0.57
XPC-204ENST00000455144 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
XPC-204ENST00000455144 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
XPC-204ENST00000455144 EPRSP07814 1512 aaKnown RBP11.45□□□□□ -0.58
XPC-204ENST00000455144 KDM6BO15054 1643 aa11.43□□□□□ -0.58
XPC-204ENST00000455144 MAP3K4Q9Y6R4 1608 aa11.43□□□□□ -0.58
XPC-204ENST00000455144 RANGAP1P46060 587 aaPredicted RBP11.43□□□□□ -0.58
XPC-204ENST00000455144 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
XPC-204ENST00000455144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
XPC-204ENST00000455144 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
XPC-204ENST00000455144 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
XPC-204ENST00000455144 ATP10BO94823 1461 aa11.4□□□□□ -0.58
XPC-204ENST00000455144 PLEKHD1A6NEE1 506 aa11.39□□□□□ -0.59
XPC-204ENST00000455144 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
XPC-204ENST00000455144 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
XPC-204ENST00000455144 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
XPC-204ENST00000455144 CDK11AQ9UQ88 783 aaPredicted RBP11.38□□□□□ -0.59
XPC-204ENST00000455144 MAGI3Q5TCQ9 1506 aa11.37□□□□□ -0.59
XPC-204ENST00000455144 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
XPC-204ENST00000455144 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
XPC-204ENST00000455144 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
XPC-204ENST00000455144 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
XPC-204ENST00000455144 NUP153P49790 1475 aaKnown RBP11.37□□□□□ -0.59
XPC-204ENST00000455144 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
XPC-204ENST00000455144 ABCA9Q8IUA7 1624 aa11.35□□□□□ -0.59
XPC-204ENST00000455144 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
XPC-204ENST00000455144 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
XPC-204ENST00000455144 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
XPC-204ENST00000455144 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
XPC-204ENST00000455144 CLIP1P30622 1438 aa11.3□□□□□ -0.6
XPC-204ENST00000455144 CCDC18Q5T9S5 1454 aa11.3□□□□□ -0.6
XPC-204ENST00000455144 NEO1Q92859 1461 aa11.3□□□□□ -0.6
XPC-204ENST00000455144 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
XPC-204ENST00000455144 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.6
XPC-204ENST00000455144 FYCO1Q9BQS8 1478 aa11.26□□□□□ -0.61
XPC-204ENST00000455144 CDK13Q14004 1512 aaKnown RBP11.26□□□□□ -0.61
XPC-204ENST00000455144 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms