RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
LINC00963-208ENST00000454968 KIAA0586Q9BVV6 1533 aa26.95■■□□□ 1.9
LINC00963-208ENST00000454968 IQGAP2Q13576 1575 aa26.91■■□□□ 1.9
LINC00963-208ENST00000454968 CEP162Q5TB80 1403 aa26.89■■□□□ 1.9
LINC00963-208ENST00000454968 FBLN2P98095 1184 aa26.88■■□□□ 1.89
LINC00963-208ENST00000454968 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
LINC00963-208ENST00000454968 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
LINC00963-208ENST00000454968 CLIP1P30622 1438 aa26.8■■□□□ 1.88
LINC00963-208ENST00000454968 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
LINC00963-208ENST00000454968 EFCAB5A4FU69 1503 aa26.8■■□□□ 1.88
LINC00963-208ENST00000454968 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
LINC00963-208ENST00000454968 ARHGAP35Q9NRY4 1499 aa26.77■■□□□ 1.88
LINC00963-208ENST00000454968 DISP1Q96F81 1524 aa26.69■■□□□ 1.86
LINC00963-208ENST00000454968 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
LINC00963-208ENST00000454968 JPH4Q96JJ6 628 aa26.66■■□□□ 1.86
LINC00963-208ENST00000454968 KIAA0556O60303 1618 aa26.66■■□□□ 1.86
LINC00963-208ENST00000454968 OSCARQ8IYS5 282 aa26.65■■□□□ 1.86
LINC00963-208ENST00000454968 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
LINC00963-208ENST00000454968 FHOD3Q2V2M9 1422 aa26.55■■□□□ 1.84
LINC00963-208ENST00000454968 CARMIL2Q6F5E8 1435 aa26.55■■□□□ 1.84
LINC00963-208ENST00000454968 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
LINC00963-208ENST00000454968 PRG4Q92954 1404 aaPredicted RBP26.55■■□□□ 1.84
LINC00963-208ENST00000454968 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
LINC00963-208ENST00000454968 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
LINC00963-208ENST00000454968 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
LINC00963-208ENST00000454968 CASKIN1Q8WXD9 1431 aa26.39■■□□□ 1.82
LINC00963-208ENST00000454968 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.81
LINC00963-208ENST00000454968 FYCO1Q9BQS8 1478 aa26.38■■□□□ 1.81
LINC00963-208ENST00000454968 ABCA8O94911 1581 aa26.34■■□□□ 1.81
LINC00963-208ENST00000454968 PTPRGP23470 1445 aa26.32■■□□□ 1.8
LINC00963-208ENST00000454968 RAPGEF6Q8TEU7 1601 aa26.31■■□□□ 1.8
LINC00963-208ENST00000454968 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
LINC00963-208ENST00000454968 MAP3K1Q13233 1512 aa26.3■■□□□ 1.8
LINC00963-208ENST00000454968 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
LINC00963-208ENST00000454968 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
LINC00963-208ENST00000454968 PLB1Q6P1J6 1458 aa26.27■■□□□ 1.8
LINC00963-208ENST00000454968 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
LINC00963-208ENST00000454968 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
LINC00963-208ENST00000454968 RIMBP3CA6NJZ7 1639 aa26.23■■□□□ 1.79
LINC00963-208ENST00000454968 RIMBP3BA6NNM3 1639 aa26.23■■□□□ 1.79
LINC00963-208ENST00000454968 RIMBP3Q9UFD9 1639 aa26.23■■□□□ 1.79
LINC00963-208ENST00000454968 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
LINC00963-208ENST00000454968 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
LINC00963-208ENST00000454968 TIAM1Q13009 1591 aa26.21■■□□□ 1.79
LINC00963-208ENST00000454968 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
LINC00963-208ENST00000454968 CCDC18Q5T9S5 1454 aa26.19■■□□□ 1.78
LINC00963-208ENST00000454968 EPRSP07814 1512 aaKnown RBP26.18■■□□□ 1.78
LINC00963-208ENST00000454968 ADCY10Q96PN6 1610 aa26.12■■□□□ 1.77
LINC00963-208ENST00000454968 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
LINC00963-208ENST00000454968 CDK13Q14004 1512 aaKnown RBP26.08■■□□□ 1.77
LINC00963-208ENST00000454968 KDM5BQ9UGL1 1544 aa26.08■■□□□ 1.77
LINC00963-208ENST00000454968 ATP10BO94823 1461 aa26.08■■□□□ 1.77
LINC00963-208ENST00000454968 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
LINC00963-208ENST00000454968 APLP2Q06481 763 aa26.05■■□□□ 1.76
LINC00963-208ENST00000454968 MAGI3Q5TCQ9 1506 aa26.03■■□□□ 1.76
LINC00963-208ENST00000454968 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
LINC00963-208ENST00000454968 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
LINC00963-208ENST00000454968 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
LINC00963-208ENST00000454968 EHBP1L1Q8N3D4 1523 aa25.99■■□□□ 1.75
LINC00963-208ENST00000454968 TROQ12816 1431 aaPredicted RBP25.91■■□□□ 1.74
LINC00963-208ENST00000454968 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.74
LINC00963-208ENST00000454968 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.74
LINC00963-208ENST00000454968 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
LINC00963-208ENST00000454968 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
LINC00963-208ENST00000454968 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
LINC00963-208ENST00000454968 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
LINC00963-208ENST00000454968 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.73
LINC00963-208ENST00000454968 MAPKBP1O60336 1514 aa25.82■■□□□ 1.72
LINC00963-208ENST00000454968 PLEKHD1A6NEE1 506 aa25.82■■□□□ 1.72
LINC00963-208ENST00000454968 NCOA2Q15596 1464 aa25.82■■□□□ 1.72
LINC00963-208ENST00000454968 KIF14Q15058 1648 aa25.81■■□□□ 1.72
LINC00963-208ENST00000454968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
LINC00963-208ENST00000454968 HNRNPUL2Q1KMD3 747 aaKnown RBP25.8■■□□□ 1.72
LINC00963-208ENST00000454968 WDR7Q9Y4E6 1490 aa25.79■■□□□ 1.72
LINC00963-208ENST00000454968 ABCC10Q5T3U5 1492 aa25.77■■□□□ 1.72
LINC00963-208ENST00000454968 ASXL2Q76L83 1435 aa25.76■■□□□ 1.71
LINC00963-208ENST00000454968 PHLDB1Q86UU1 1377 aa25.74■■□□□ 1.71
LINC00963-208ENST00000454968 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
LINC00963-208ENST00000454968 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
LINC00963-208ENST00000454968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.712e-6■■■□□ 16.6
LINC00963-208ENST00000454968 MYOM3Q5VTT5 1437 aa25.69■■□□□ 1.7
LINC00963-208ENST00000454968 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
LINC00963-208ENST00000454968 ABCA9Q8IUA7 1624 aa25.67■■□□□ 1.7
LINC00963-208ENST00000454968 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
LINC00963-208ENST00000454968 ITSN2Q9NZM3 1697 aa25.67■■□□□ 1.7
LINC00963-208ENST00000454968 GPATCH8Q9UKJ3 1502 aaKnown RBP25.66■■□□□ 1.7
LINC00963-208ENST00000454968 MIA2Q96PC5 1412 aa25.64■■□□□ 1.7
LINC00963-208ENST00000454968 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
LINC00963-208ENST00000454968 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
LINC00963-208ENST00000454968 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
LINC00963-208ENST00000454968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.69
LINC00963-208ENST00000454968 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
LINC00963-208ENST00000454968 CDC42BPBQ9Y5S2 1711 aa25.61■■□□□ 1.69
LINC00963-208ENST00000454968 ARAP3Q8WWN8 1544 aa25.61■■□□□ 1.69
LINC00963-208ENST00000454968 GLI2P10070 1586 aa25.6■■□□□ 1.69
LINC00963-208ENST00000454968 CCNB3Q8WWL7 1395 aa25.6■■□□□ 1.69
LINC00963-208ENST00000454968 TCOF1Q13428 1488 aaKnown RBP25.58■■□□□ 1.69
LINC00963-208ENST00000454968 DIP2BQ9P265 1576 aa25.56■■□□□ 1.68
LINC00963-208ENST00000454968 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
LINC00963-208ENST00000454968 PLCH2O75038 1416 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms