RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
ATXN3-205ENST00000454964 KIAA0586Q9BVV6 1533 aa15.51■□□□□ 0.07
ATXN3-205ENST00000454964 KIF21BO75037 1637 aa15.49■□□□□ 0.07
ATXN3-205ENST00000454964 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
ATXN3-205ENST00000454964 JPH4Q96JJ6 628 aa15.47■□□□□ 0.07
ATXN3-205ENST00000454964 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
ATXN3-205ENST00000454964 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
ATXN3-205ENST00000454964 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
ATXN3-205ENST00000454964 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
ATXN3-205ENST00000454964 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
ATXN3-205ENST00000454964 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
ATXN3-205ENST00000454964 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
ATXN3-205ENST00000454964 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
ATXN3-205ENST00000454964 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
ATXN3-205ENST00000454964 UGGT2Q9NYU1 1516 aa15.34■□□□□ 0.05
ATXN3-205ENST00000454964 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
ATXN3-205ENST00000454964 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
ATXN3-205ENST00000454964 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
ATXN3-205ENST00000454964 TNIKQ9UKE5 1360 aa15.29■□□□□ 0.04
ATXN3-205ENST00000454964 EFCAB5A4FU69 1503 aa15.27■□□□□ 0.03
ATXN3-205ENST00000454964 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
ATXN3-205ENST00000454964 PTPRGP23470 1445 aa15.26■□□□□ 0.03
ATXN3-205ENST00000454964 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATXN3-205ENST00000454964 DISP1Q96F81 1524 aa15.22■□□□□ 0.03
ATXN3-205ENST00000454964 KIAA0556O60303 1618 aa15.22■□□□□ 0.03
ATXN3-205ENST00000454964 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
ATXN3-205ENST00000454964 SAMD9Q5K651 1589 aa15.19■□□□□ 0.02
ATXN3-205ENST00000454964 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
ATXN3-205ENST00000454964 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
ATXN3-205ENST00000454964 FMN1Q68DA7 1419 aa15.16■□□□□ 0.02
ATXN3-205ENST00000454964 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
ATXN3-205ENST00000454964 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
ATXN3-205ENST00000454964 UACAQ9BZF9 1416 aa15.14■□□□□ 0.01
ATXN3-205ENST00000454964 UHRF1BP1LA0JNW5 1464 aa15.14■□□□□ 0.01
ATXN3-205ENST00000454964 CLIP1P30622 1438 aa15.13■□□□□ 0.01
ATXN3-205ENST00000454964 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
ATXN3-205ENST00000454964 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
ATXN3-205ENST00000454964 ADRA2BP18089 450 aa15.09■□□□□ 0.01
ATXN3-205ENST00000454964 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
ATXN3-205ENST00000454964 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
ATXN3-205ENST00000454964 CEP162Q5TB80 1403 aa15.08■□□□□ 0
ATXN3-205ENST00000454964 ABCC2Q92887 1545 aa15.07■□□□□ 0
ATXN3-205ENST00000454964 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
ATXN3-205ENST00000454964 FHOD3Q2V2M9 1422 aa15.05■□□□□ -0
ATXN3-205ENST00000454964 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
ATXN3-205ENST00000454964 ABCA8O94911 1581 aa15.04■□□□□ -0
ATXN3-205ENST00000454964 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
ATXN3-205ENST00000454964 KDM5BQ9UGL1 1544 aa15.02■□□□□ -0
ATXN3-205ENST00000454964 PLB1Q6P1J6 1458 aa15.01□□□□□ -0.01
ATXN3-205ENST00000454964 MAPKBP1O60336 1514 aa15□□□□□ -0.01
ATXN3-205ENST00000454964 PLEKHD1A6NEE1 506 aa14.99□□□□□ -0.01
ATXN3-205ENST00000454964 CASKIN1Q8WXD9 1431 aa14.99□□□□□ -0.01
ATXN3-205ENST00000454964 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
ATXN3-205ENST00000454964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
ATXN3-205ENST00000454964 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
ATXN3-205ENST00000454964 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
ATXN3-205ENST00000454964 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
ATXN3-205ENST00000454964 FYCO1Q9BQS8 1478 aa14.96□□□□□ -0.01
ATXN3-205ENST00000454964 APLP2Q06481 763 aa14.95□□□□□ -0.02
ATXN3-205ENST00000454964 ZCCHC11Q5TAX3 1644 aaKnown RBP14.95□□□□□ -0.02
ATXN3-205ENST00000454964 ATP10BO94823 1461 aa14.94□□□□□ -0.02
ATXN3-205ENST00000454964 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
ATXN3-205ENST00000454964 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
ATXN3-205ENST00000454964 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
ATXN3-205ENST00000454964 EPRSP07814 1512 aaKnown RBP14.91□□□□□ -0.02
ATXN3-205ENST00000454964 ASXL2Q76L83 1435 aa14.91□□□□□ -0.02
ATXN3-205ENST00000454964 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
ATXN3-205ENST00000454964 ABCC10Q5T3U5 1492 aa14.89□□□□□ -0.03
ATXN3-205ENST00000454964 FAM69CQ0P6D2 419 aa14.87□□□□□ -0.03
ATXN3-205ENST00000454964 MAP3K1Q13233 1512 aa14.87□□□□□ -0.03
ATXN3-205ENST00000454964 GLI2P10070 1586 aa14.86□□□□□ -0.03
ATXN3-205ENST00000454964 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
ATXN3-205ENST00000454964 KCNH8Q96L42 1107 aa14.84□□□□□ -0.03
ATXN3-205ENST00000454964 KIF13AQ9H1H9 1805 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 MTUS2Q5JR59 1369 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 TROQ12816 1431 aaPredicted RBP14.81□□□□□ -0.04
ATXN3-205ENST00000454964 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 CFAP43Q8NDM7 1665 aa14.81□□□□□ -0.04
ATXN3-205ENST00000454964 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
ATXN3-205ENST00000454964 CDK13Q14004 1512 aaKnown RBP14.78□□□□□ -0.04
ATXN3-205ENST00000454964 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
ATXN3-205ENST00000454964 LRRIQ1Q96JM4 1722 aa14.77□□□□□ -0.05
ATXN3-205ENST00000454964 KIF14Q15058 1648 aa14.77□□□□□ -0.05
ATXN3-205ENST00000454964 ABCA9Q8IUA7 1624 aa14.77□□□□□ -0.05
ATXN3-205ENST00000454964 TIAM1Q13009 1591 aa14.75□□□□□ -0.05
ATXN3-205ENST00000454964 MAP3K4Q9Y6R4 1608 aa14.74□□□□□ -0.05
ATXN3-205ENST00000454964 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
ATXN3-205ENST00000454964 EHBP1L1Q8N3D4 1523 aa14.74□□□□□ -0.05
ATXN3-205ENST00000454964 ARAP3Q8WWN8 1544 aa14.72□□□□□ -0.05
ATXN3-205ENST00000454964 EFCAB2Q5VUJ9 269 aa14.72□□□□□ -0.05
ATXN3-205ENST00000454964 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
ATXN3-205ENST00000454964 SUPT6HQ7KZ85 1726 aaKnown RBP14.71□□□□□ -0.05
ATXN3-205ENST00000454964 LRRC9Q6ZRR7 1453 aa14.7□□□□□ -0.06
ATXN3-205ENST00000454964 MYO5CQ9NQX4 1742 aa14.7□□□□□ -0.06
ATXN3-205ENST00000454964 CFAP74Q9C0B2 1584 aa14.7□□□□□ -0.06
ATXN3-205ENST00000454964 PIAS4Q8N2W9 510 aaPredicted RBP14.7□□□□□ -0.06
ATXN3-205ENST00000454964 PLCH2O75038 1416 aa14.69□□□□□ -0.06
ATXN3-205ENST00000454964 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms