RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 FOXD1Q16676 465 aa8.74□□□□□ -1.01
RIF1-207ENST00000454583 FHAD1B1AJZ9 1412 aa8.74□□□□□ -1.01
RIF1-207ENST00000454583 KIF27Q86VH2 1401 aa8.74□□□□□ -1.01
RIF1-207ENST00000454583 IQGAP2Q13576 1575 aa8.72□□□□□ -1.01
RIF1-207ENST00000454583 ARAP1Q96P48 1450 aa8.72□□□□□ -1.01
RIF1-207ENST00000454583 EFCAB5A4FU69 1503 aa8.71□□□□□ -1.02
RIF1-207ENST00000454583 ADCY10Q96PN6 1610 aa8.71□□□□□ -1.02
RIF1-207ENST00000454583 ERCC6L2Q5T890 1561 aa8.71□□□□□ -1.02
RIF1-207ENST00000454583 ABCA8O94911 1581 aa8.69□□□□□ -1.02
RIF1-207ENST00000454583 GOLGA3Q08378 1498 aa8.68□□□□□ -1.02
RIF1-207ENST00000454583 ARHGAP35Q9NRY4 1499 aa8.68□□□□□ -1.02
RIF1-207ENST00000454583 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
RIF1-207ENST00000454583 KIAA0586Q9BVV6 1533 aa8.65□□□□□ -1.02
RIF1-207ENST00000454583 MAP3K1Q13233 1512 aa8.65□□□□□ -1.03
RIF1-207ENST00000454583 TNIKQ9UKE5 1360 aa8.64□□□□□ -1.03
RIF1-207ENST00000454583 KDM5BQ9UGL1 1544 aa8.64□□□□□ -1.03
RIF1-207ENST00000454583 TDRD9Q8NDG6 1382 aaKnown RBP8.63□□□□□ -1.03
RIF1-207ENST00000454583 PCF11O94913 1555 aaKnown RBP8.63□□□□□ -1.03
RIF1-207ENST00000454583 PPRC1Q5VV67 1664 aaKnown RBP8.61□□□□□ -1.03
RIF1-207ENST00000454583 MAGI3Q5TCQ9 1506 aa8.61□□□□□ -1.03
RIF1-207ENST00000454583 RIMBP3CA6NJZ7 1639 aa8.61□□□□□ -1.03
RIF1-207ENST00000454583 RIMBP3BA6NNM3 1639 aa8.61□□□□□ -1.03
RIF1-207ENST00000454583 RIMBP3Q9UFD9 1639 aa8.61□□□□□ -1.03
RIF1-207ENST00000454583 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
RIF1-207ENST00000454583 RAPGEF6Q8TEU7 1601 aa8.59□□□□□ -1.03
RIF1-207ENST00000454583 UHRF1BP1LA0JNW5 1464 aa8.58□□□□□ -1.04
RIF1-207ENST00000454583 KIF13AQ9H1H9 1805 aa8.58□□□□□ -1.04
RIF1-207ENST00000454583 ZCCHC11Q5TAX3 1644 aaKnown RBP8.57□□□□□ -1.04
RIF1-207ENST00000454583 CDC42BPAQ5VT25 1732 aa8.54□□□□□ -1.04
RIF1-207ENST00000454583 TIAM1Q13009 1591 aa8.54□□□□□ -1.04
RIF1-207ENST00000454583 CROCC2H7BZ55 1655 aa8.54□□□□□ -1.04
RIF1-207ENST00000454583 ABCC2Q92887 1545 aa8.53□□□□□ -1.04
RIF1-207ENST00000454583 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
RIF1-207ENST00000454583 CSRNP3Q8WYN3 585 aa8.53□□□□□ -1.04
RIF1-207ENST00000454583 CDC42BPBQ9Y5S2 1711 aa8.53□□□□□ -1.04
RIF1-207ENST00000454583 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
RIF1-207ENST00000454583 MAP3K4Q9Y6R4 1608 aa8.52□□□□□ -1.04
RIF1-207ENST00000454583 FYCO1Q9BQS8 1478 aa8.52□□□□□ -1.05
RIF1-207ENST00000454583 HECW1Q76N89 1606 aa8.52□□□□□ -1.05
RIF1-207ENST00000454583 NUP153P49790 1475 aaKnown RBP8.51□□□□□ -1.05
RIF1-207ENST00000454583 ABCA9Q8IUA7 1624 aa8.49□□□□□ -1.05
RIF1-207ENST00000454583 MAPKBP1O60336 1514 aa8.48□□□□□ -1.05
RIF1-207ENST00000454583 CASKIN1Q8WXD9 1431 aa8.48□□□□□ -1.05
RIF1-207ENST00000454583 PREX2Q70Z35 1606 aa8.47□□□□□ -1.05
RIF1-207ENST00000454583 BCORL1Q5H9F3 1711 aa8.47□□□□□ -1.05
RIF1-207ENST00000454583 GLI2P10070 1586 aa8.47□□□□□ -1.05
RIF1-207ENST00000454583 CLIP1P30622 1438 aa8.47□□□□□ -1.05
RIF1-207ENST00000454583 KIF14Q15058 1648 aa8.46□□□□□ -1.05
RIF1-207ENST00000454583 VPS8Q8N3P4 1428 aa8.46□□□□□ -1.05
RIF1-207ENST00000454583 PPP6R1Q9UPN7 881 aa8.46□□□□□ -1.06
RIF1-207ENST00000454583 ABCC10Q5T3U5 1492 aa8.46□□□□□ -1.06
RIF1-207ENST00000454583 ARAP3Q8WWN8 1544 aa8.44□□□□□ -1.06
RIF1-207ENST00000454583 TTC37Q6PGP7 1564 aa8.43□□□□□ -1.06
RIF1-207ENST00000454583 SIGLEC1Q9BZZ2 1709 aa8.42□□□□□ -1.06
RIF1-207ENST00000454583 ITSN2Q9NZM3 1697 aa8.42□□□□□ -1.06
RIF1-207ENST00000454583 EPRSP07814 1512 aaKnown RBP8.42□□□□□ -1.06
RIF1-207ENST00000454583 FRMPD1Q5SYB0 1578 aa8.41□□□□□ -1.06
RIF1-207ENST00000454583 DIP2BQ9P265 1576 aa8.41□□□□□ -1.06
RIF1-207ENST00000454583 MYO5CQ9NQX4 1742 aa8.41□□□□□ -1.06
RIF1-207ENST00000454583 SUPT6HQ7KZ85 1726 aaKnown RBP8.4□□□□□ -1.06
RIF1-207ENST00000454583 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.06
RIF1-207ENST00000454583 RICTORQ6R327 1708 aa8.4□□□□□ -1.06
RIF1-207ENST00000454583 EHBP1L1Q8N3D4 1523 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 ADRA2BP18089 450 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 CCDC18Q5T9S5 1454 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 PLB1Q6P1J6 1458 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.39□□□□□ -1.07
RIF1-207ENST00000454583 GCC2Q8IWJ2 1684 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 ATP10BO94823 1461 aa8.39□□□□□ -1.07
RIF1-207ENST00000454583 ADGBQ8N7X0 1667 aa8.38□□□□□ -1.07
RIF1-207ENST00000454583 FHOD3Q2V2M9 1422 aa8.38□□□□□ -1.07
RIF1-207ENST00000454583 MAST1Q9Y2H9 1570 aa8.38□□□□□ -1.07
RIF1-207ENST00000454583 PRG4Q92954 1404 aaPredicted RBP8.38□□□□□ -1.07
RIF1-207ENST00000454583 LRRC9Q6ZRR7 1453 aa8.38□□□□□ -1.07
RIF1-207ENST00000454583 CDK13Q14004 1512 aaKnown RBP8.38□□□□□ -1.07
RIF1-207ENST00000454583 SAMD9LQ8IVG5 1584 aa8.36□□□□□ -1.07
RIF1-207ENST00000454583 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
RIF1-207ENST00000454583 DEPDC5O75140 1603 aa8.34□□□□□ -1.07
RIF1-207ENST00000454583 DNMT1P26358 1616 aaKnown RBP8.34□□□□□ -1.07
RIF1-207ENST00000454583 FMN1Q68DA7 1419 aa8.34□□□□□ -1.07
RIF1-207ENST00000454583 ARHGEF5Q12774 1597 aa8.34□□□□□ -1.07
RIF1-207ENST00000454583 INO80Q9ULG1 1556 aaPredicted RBP8.34□□□□□ -1.07
RIF1-207ENST00000454583 RRBP1Q9P2E9 1410 aaKnown RBP8.33□□□□□ -1.08
RIF1-207ENST00000454583 KDM5CP41229 1560 aa8.33□□□□□ -1.08
RIF1-207ENST00000454583 UACAQ9BZF9 1416 aa8.32□□□□□ -1.08
RIF1-207ENST00000454583 PLXNC1O60486 1568 aa8.31□□□□□ -1.08
RIF1-207ENST00000454583 PTPN23Q9H3S7 1636 aa8.3□□□□□ -1.08
RIF1-207ENST00000454583 ABCC1P33527 1531 aa8.3□□□□□ -1.08
RIF1-207ENST00000454583 MROH1Q8NDA8 1641 aa8.29□□□□□ -1.08
RIF1-207ENST00000454583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.29□□□□□ -1.08
RIF1-207ENST00000454583 ZMYM4Q5VZL5 1548 aa8.29□□□□□ -1.08
RIF1-207ENST00000454583 KIDINS220Q9ULH0 1771 aa8.28□□□□□ -1.08
RIF1-207ENST00000454583 CFAP74Q9C0B2 1584 aa8.28□□□□□ -1.08
RIF1-207ENST00000454583 REREQ9P2R6 1566 aa8.28□□□□□ -1.08
RIF1-207ENST00000454583 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
RIF1-207ENST00000454583 KDM6BO15054 1643 aa8.27□□□□□ -1.09
RIF1-207ENST00000454583 VWDEQ8N2E2 1590 aa8.26□□□□□ -1.09
RIF1-207ENST00000454583 MAGI2Q86UL8 1455 aa8.26□□□□□ -1.09
RIF1-207ENST00000454583 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
RIF1-207ENST00000454583 JPH4Q96JJ6 628 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms