RNA–Protein interactions for RNA: ENST00000454520.6

RACGAP1-203, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,080 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-203ENST00000454520 CEP170Q5SW79 1584 aa10.51□□□□□ -0.73
RACGAP1-203ENST00000454520 NUP160Q12769 1436 aa10.5□□□□□ -0.73
RACGAP1-203ENST00000454520 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
RACGAP1-203ENST00000454520 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
RACGAP1-203ENST00000454520 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
RACGAP1-203ENST00000454520 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
RACGAP1-203ENST00000454520 CUL7Q14999 1698 aa10.48□□□□□ -0.73
RACGAP1-203ENST00000454520 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
RACGAP1-203ENST00000454520 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.73
RACGAP1-203ENST00000454520 ERCC6L2Q5T890 1561 aa10.46□□□□□ -0.74
RACGAP1-203ENST00000454520 KIAA0586Q9BVV6 1533 aa10.45□□□□□ -0.74
RACGAP1-203ENST00000454520 EEA1Q15075 1411 aa10.45□□□□□ -0.74
RACGAP1-203ENST00000454520 ARID3CA6NKF2 412 aa10.44□□□□□ -0.74
RACGAP1-203ENST00000454520 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
RACGAP1-203ENST00000454520 LOC105371045A0A1W2PR82 267 aa10.44□□□□□ -0.74
RACGAP1-203ENST00000454520 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
RACGAP1-203ENST00000454520 ATP1B4Q9UN42 357 aaPredicted RBP10.42□□□□□ -0.74
RACGAP1-203ENST00000454520 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
RACGAP1-203ENST00000454520 CARMIL2Q6F5E8 1435 aa10.4□□□□□ -0.74
RACGAP1-203ENST00000454520 PTPRGP23470 1445 aa10.39□□□□□ -0.75
RACGAP1-203ENST00000454520 IQGAP2Q13576 1575 aa10.39□□□□□ -0.75
RACGAP1-203ENST00000454520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
RACGAP1-203ENST00000454520 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
RACGAP1-203ENST00000454520 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
RACGAP1-203ENST00000454520 GOLGA3Q08378 1498 aa10.34□□□□□ -0.75
RACGAP1-203ENST00000454520 SHROOM2Q13796 1616 aa10.33□□□□□ -0.76
RACGAP1-203ENST00000454520 DISP1Q96F81 1524 aa10.32□□□□□ -0.76
RACGAP1-203ENST00000454520 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
RACGAP1-203ENST00000454520 FHOD3Q2V2M9 1422 aa10.3□□□□□ -0.76
RACGAP1-203ENST00000454520 CTTNBP2Q8WZ74 1663 aa10.3□□□□□ -0.76
RACGAP1-203ENST00000454520 KIF21BO75037 1637 aa10.3□□□□□ -0.76
RACGAP1-203ENST00000454520 UGGT2Q9NYU1 1516 aa10.29□□□□□ -0.76
RACGAP1-203ENST00000454520 FAM69CQ0P6D2 419 aa10.28□□□□□ -0.76
RACGAP1-203ENST00000454520 PLB1Q6P1J6 1458 aa10.28□□□□□ -0.76
RACGAP1-203ENST00000454520 UACAQ9BZF9 1416 aa10.27□□□□□ -0.77
RACGAP1-203ENST00000454520 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
RACGAP1-203ENST00000454520 CLIP1P30622 1438 aa10.23□□□□□ -0.77
RACGAP1-203ENST00000454520 ADCY10Q96PN6 1610 aa10.22□□□□□ -0.77
RACGAP1-203ENST00000454520 ARHGAP35Q9NRY4 1499 aa10.2□□□□□ -0.78
RACGAP1-203ENST00000454520 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
RACGAP1-203ENST00000454520 PLEKHD1A6NEE1 506 aa10.19□□□□□ -0.78
RACGAP1-203ENST00000454520 ASXL2Q76L83 1435 aa10.18□□□□□ -0.78
RACGAP1-203ENST00000454520 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
RACGAP1-203ENST00000454520 SAMD9Q5K651 1589 aa10.16□□□□□ -0.78
RACGAP1-203ENST00000454520 FMN1Q68DA7 1419 aa10.15□□□□□ -0.78
RACGAP1-203ENST00000454520 EFCAB5A4FU69 1503 aa10.15□□□□□ -0.79
RACGAP1-203ENST00000454520 ATP10BO94823 1461 aa10.15□□□□□ -0.79
RACGAP1-203ENST00000454520 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
RACGAP1-203ENST00000454520 UHRF1BP1LA0JNW5 1464 aa10.14□□□□□ -0.79
RACGAP1-203ENST00000454520 ABCA8O94911 1581 aa10.13□□□□□ -0.79
RACGAP1-203ENST00000454520 KDM5BQ9UGL1 1544 aa10.13□□□□□ -0.79
RACGAP1-203ENST00000454520 NUP153P49790 1475 aaKnown RBP10.12□□□□□ -0.79
RACGAP1-203ENST00000454520 RAPGEF6Q8TEU7 1601 aa10.12□□□□□ -0.79
RACGAP1-203ENST00000454520 APLP2Q06481 763 aa10.12□□□□□ -0.79
RACGAP1-203ENST00000454520 ZCCHC11Q5TAX3 1644 aaKnown RBP10.11□□□□□ -0.79
RACGAP1-203ENST00000454520 TSPOAP1O95153 1857 aa10.11□□□□□ -0.79
RACGAP1-203ENST00000454520 CDK13Q14004 1512 aaKnown RBP10.11□□□□□ -0.79
RACGAP1-203ENST00000454520 ABCC10Q5T3U5 1492 aa10.11□□□□□ -0.79
RACGAP1-203ENST00000454520 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
RACGAP1-203ENST00000454520 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
RACGAP1-203ENST00000454520 MAPKBP1O60336 1514 aa10.09□□□□□ -0.79
RACGAP1-203ENST00000454520 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
RACGAP1-203ENST00000454520 EPRSP07814 1512 aaKnown RBP10.07□□□□□ -0.8
RACGAP1-203ENST00000454520 CD109Q6YHK3 1445 aa10.07□□□□□ -0.8
RACGAP1-203ENST00000454520 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 DIP2BQ9P265 1576 aa10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 MTUS2Q5JR59 1369 aa10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
RACGAP1-203ENST00000454520 HECW1Q76N89 1606 aa10.04□□□□□ -0.8
RACGAP1-203ENST00000454520 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
RACGAP1-203ENST00000454520 KANK4Q5T7N3 995 aaPredicted RBP10.02□□□□□ -0.81
RACGAP1-203ENST00000454520 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
RACGAP1-203ENST00000454520 FYCO1Q9BQS8 1478 aa10□□□□□ -0.81
RACGAP1-203ENST00000454520 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
RACGAP1-203ENST00000454520 EFCAB2Q5VUJ9 269 aa9.98□□□□□ -0.81
RACGAP1-203ENST00000454520 CFDP1Q9UEE9 299 aaPredicted RBP9.98□□□□□ -0.81
RACGAP1-203ENST00000454520 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
RACGAP1-203ENST00000454520 LRRIQ1Q96JM4 1722 aa9.96□□□□□ -0.81
RACGAP1-203ENST00000454520 TEX14Q8IWB6 1497 aa9.96□□□□□ -0.81
RACGAP1-203ENST00000454520 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.82
RACGAP1-203ENST00000454520 COL17A1Q9UMD9 1497 aaPredicted RBP9.96□□□□□ -0.82
RACGAP1-203ENST00000454520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.96□□□□□ -0.82
RACGAP1-203ENST00000454520 AFAP1Q8N556 730 aa9.96□□□□□ -0.82
RACGAP1-203ENST00000454520 MAGI3Q5TCQ9 1506 aa9.95□□□□□ -0.82
RACGAP1-203ENST00000454520 GLI2P10070 1586 aa9.95□□□□□ -0.82
RACGAP1-203ENST00000454520 HNRNPMP52272 730 aaKnown RBP eCLIP9.95□□□□□ -0.829e-9■■□□□ 14.1
RACGAP1-203ENST00000454520 KIF14Q15058 1648 aa9.95□□□□□ -0.82
RACGAP1-203ENST00000454520 ZNF644Q9H582 1327 aaPredicted RBP9.95□□□□□ -0.82
RACGAP1-203ENST00000454520 FANCAO15360 1455 aa9.95□□□□□ -0.82
RACGAP1-203ENST00000454520 ARID4BQ4LE39 1312 aaPredicted RBP9.94□□□□□ -0.82
RACGAP1-203ENST00000454520 KDM6BO15054 1643 aa9.94□□□□□ -0.82
RACGAP1-203ENST00000454520 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
RACGAP1-203ENST00000454520 PLPPR3Q6T4P5 718 aa9.93□□□□□ -0.82
RACGAP1-203ENST00000454520 MAP3K4Q9Y6R4 1608 aa9.93□□□□□ -0.82
RACGAP1-203ENST00000454520 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
RACGAP1-203ENST00000454520 PLCH2O75038 1416 aa9.92□□□□□ -0.82
RACGAP1-203ENST00000454520 AKNAQ7Z591 1439 aa9.92□□□□□ -0.82
RACGAP1-203ENST00000454520 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms