RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
LINC01875-201ENST00000454477 TSPOAP1O95153 1857 aa22.38■■□□□ 1.17
LINC01875-201ENST00000454477 NUP160Q12769 1436 aa22.37■■□□□ 1.17
LINC01875-201ENST00000454477 NPM1P06748 294 aaKnown RBP eCLIP22.35■■□□□ 1.17
LINC01875-201ENST00000454477 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
LINC01875-201ENST00000454477 CUX1P39880 1505 aa22.31■■□□□ 1.16
LINC01875-201ENST00000454477 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
LINC01875-201ENST00000454477 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
LINC01875-201ENST00000454477 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
LINC01875-201ENST00000454477 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.15
LINC01875-201ENST00000454477 ABCA5Q8WWZ7 1642 aa22.19■■□□□ 1.14
LINC01875-201ENST00000454477 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
LINC01875-201ENST00000454477 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
LINC01875-201ENST00000454477 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.13
LINC01875-201ENST00000454477 COL17A1Q9UMD9 1497 aaPredicted RBP22.1■■□□□ 1.13
LINC01875-201ENST00000454477 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
LINC01875-201ENST00000454477 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
LINC01875-201ENST00000454477 GLI2P10070 1586 aa22.04■■□□□ 1.12
LINC01875-201ENST00000454477 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
LINC01875-201ENST00000454477 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
LINC01875-201ENST00000454477 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
LINC01875-201ENST00000454477 PCF11O94913 1555 aaKnown RBP21.91■■□□□ 1.1
LINC01875-201ENST00000454477 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
LINC01875-201ENST00000454477 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
LINC01875-201ENST00000454477 ERICH3Q5RHP9 1530 aa21.88■■□□□ 1.09
LINC01875-201ENST00000454477 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
LINC01875-201ENST00000454477 ASXL2Q76L83 1435 aa21.86■■□□□ 1.09
LINC01875-201ENST00000454477 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
LINC01875-201ENST00000454477 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
LINC01875-201ENST00000454477 PTPRMP28827 1452 aa21.84■■□□□ 1.09
LINC01875-201ENST00000454477 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
LINC01875-201ENST00000454477 IGF1RP08069 1367 aa21.75■■□□□ 1.07
LINC01875-201ENST00000454477 KIF21BO75037 1637 aa21.75■■□□□ 1.07
LINC01875-201ENST00000454477 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
LINC01875-201ENST00000454477 EPRSP07814 1512 aaKnown RBP21.73■■□□□ 1.07
LINC01875-201ENST00000454477 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
LINC01875-201ENST00000454477 PTPRGP23470 1445 aa21.65■■□□□ 1.06
LINC01875-201ENST00000454477 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
LINC01875-201ENST00000454477 CUL7Q14999 1698 aa21.63■■□□□ 1.05
LINC01875-201ENST00000454477 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
LINC01875-201ENST00000454477 HSPA2P54652 639 aa21.56■■□□□ 1.04
LINC01875-201ENST00000454477 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
LINC01875-201ENST00000454477 MADDQ8WXG6 1647 aa21.51■■□□□ 1.03
LINC01875-201ENST00000454477 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
LINC01875-201ENST00000454477 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
LINC01875-201ENST00000454477 BCORL1Q5H9F3 1711 aa21.5■■□□□ 1.03
LINC01875-201ENST00000454477 RAPGEF2Q9Y4G8 1499 aa21.46■■□□□ 1.03
LINC01875-201ENST00000454477 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
LINC01875-201ENST00000454477 CD109Q6YHK3 1445 aa21.42■■□□□ 1.02
LINC01875-201ENST00000454477 CFAP43Q8NDM7 1665 aa21.41■■□□□ 1.02
LINC01875-201ENST00000454477 ARAP3Q8WWN8 1544 aa21.41■■□□□ 1.02
LINC01875-201ENST00000454477 WDR7Q9Y4E6 1490 aa21.41■■□□□ 1.02
LINC01875-201ENST00000454477 CARMIL2Q6F5E8 1435 aa21.41■■□□□ 1.02
LINC01875-201ENST00000454477 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
LINC01875-201ENST00000454477 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
LINC01875-201ENST00000454477 EEA1Q15075 1411 aa21.38■■□□□ 1.01
LINC01875-201ENST00000454477 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
LINC01875-201ENST00000454477 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
LINC01875-201ENST00000454477 IQSEC2Q5JU85 1478 aa21.35■■□□□ 1.01
LINC01875-201ENST00000454477 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
LINC01875-201ENST00000454477 PRXQ9BXM0 1461 aa21.32■■□□□ 1
LINC01875-201ENST00000454477 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
LINC01875-201ENST00000454477 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
LINC01875-201ENST00000454477 IQGAP2Q13576 1575 aa21.28■■□□□ 1
LINC01875-201ENST00000454477 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
LINC01875-201ENST00000454477 ARID4BQ4LE39 1312 aaPredicted RBP21.28■■□□□ 1
LINC01875-201ENST00000454477 STRCQ7RTU9 1775 aa21.22■□□□□ 0.99
LINC01875-201ENST00000454477 PHLDB1Q86UU1 1377 aa21.22■□□□□ 0.99
LINC01875-201ENST00000454477 UGGT2Q9NYU1 1516 aa21.21■□□□□ 0.99
LINC01875-201ENST00000454477 MED1Q15648 1581 aaPredicted RBP21.21■□□□□ 0.99
LINC01875-201ENST00000454477 LTBP4Q8N2S1 1624 aa21.2■□□□□ 0.98
LINC01875-201ENST00000454477 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
LINC01875-201ENST00000454477 PTPRTO14522 1441 aa21.16■□□□□ 0.98
LINC01875-201ENST00000454477 PREX1Q8TCU6 1659 aa21.15■□□□□ 0.98
LINC01875-201ENST00000454477 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
LINC01875-201ENST00000454477 ARHGEF40Q8TER5 1519 aa21.13■□□□□ 0.97
LINC01875-201ENST00000454477 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
LINC01875-201ENST00000454477 TTC37Q6PGP7 1564 aa21.11■□□□□ 0.97
LINC01875-201ENST00000454477 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
LINC01875-201ENST00000454477 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
LINC01875-201ENST00000454477 POGZQ7Z3K3 1410 aa21.11■□□□□ 0.97
LINC01875-201ENST00000454477 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
LINC01875-201ENST00000454477 FANCAO15360 1455 aa21.06■□□□□ 0.96
LINC01875-201ENST00000454477 KIAA0556O60303 1618 aa21.04■□□□□ 0.96
LINC01875-201ENST00000454477 NEO1Q92859 1461 aa21.04■□□□□ 0.96
LINC01875-201ENST00000454477 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.95
LINC01875-201ENST00000454477 FER1L4A9Z1Z3 1794 aa21.01■□□□□ 0.95
LINC01875-201ENST00000454477 UBTFP17480 764 aaKnown RBP21.01■□□□□ 0.95
LINC01875-201ENST00000454477 UBAP1LF5GYI3 381 aa21■□□□□ 0.95
LINC01875-201ENST00000454477 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
LINC01875-201ENST00000454477 UHRF1BP1Q6BDS2 1440 aa20.97■□□□□ 0.95
LINC01875-201ENST00000454477 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
LINC01875-201ENST00000454477 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
LINC01875-201ENST00000454477 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
LINC01875-201ENST00000454477 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
LINC01875-201ENST00000454477 SIGLEC1Q9BZZ2 1709 aa20.91■□□□□ 0.94
LINC01875-201ENST00000454477 HSPA1LP34931 641 aa20.88■□□□□ 0.93
LINC01875-201ENST00000454477 SETD1BQ9UPS6 1966 aaKnown RBP20.88■□□□□ 0.93
LINC01875-201ENST00000454477 ABCA8O94911 1581 aa20.88■□□□□ 0.93
LINC01875-201ENST00000454477 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms