RNA–Protein interactions for RNA: ENST00000453514.5

PAPD4-204, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PAPD4, Length 3,523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-204ENST00000453514 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
PAPD4-204ENST00000453514 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
PAPD4-204ENST00000453514 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
PAPD4-204ENST00000453514 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
PAPD4-204ENST00000453514 LAMC3Q9Y6N6 1575 aa13.22□□□□□ -0.29
PAPD4-204ENST00000453514 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
PAPD4-204ENST00000453514 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
PAPD4-204ENST00000453514 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
PAPD4-204ENST00000453514 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
PAPD4-204ENST00000453514 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
PAPD4-204ENST00000453514 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
PAPD4-204ENST00000453514 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
PAPD4-204ENST00000453514 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
PAPD4-204ENST00000453514 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
PAPD4-204ENST00000453514 CTTNBP2Q8WZ74 1663 aa13.16□□□□□ -0.3
PAPD4-204ENST00000453514 CUL7Q14999 1698 aa13.16□□□□□ -0.3
PAPD4-204ENST00000453514 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
PAPD4-204ENST00000453514 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
PAPD4-204ENST00000453514 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
PAPD4-204ENST00000453514 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
PAPD4-204ENST00000453514 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
PAPD4-204ENST00000453514 ARID3CA6NKF2 412 aa13.13□□□□□ -0.31
PAPD4-204ENST00000453514 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
PAPD4-204ENST00000453514 CLSPNQ9HAW4 1339 aa13.12□□□□□ -0.31
PAPD4-204ENST00000453514 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.31
PAPD4-204ENST00000453514 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
PAPD4-204ENST00000453514 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
PAPD4-204ENST00000453514 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
PAPD4-204ENST00000453514 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
PAPD4-204ENST00000453514 MIER1Q8N108 512 aa13.08□□□□□ -0.32
PAPD4-204ENST00000453514 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
PAPD4-204ENST00000453514 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
PAPD4-204ENST00000453514 ZNF316A6NFI3 1004 aaPredicted RBP13.06□□□□□ -0.32
PAPD4-204ENST00000453514 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
PAPD4-204ENST00000453514 LRRC9Q6ZRR7 1453 aa13.04□□□□□ -0.32
PAPD4-204ENST00000453514 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
PAPD4-204ENST00000453514 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
PAPD4-204ENST00000453514 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
PAPD4-204ENST00000453514 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
PAPD4-204ENST00000453514 ZNF608Q9ULD9 1512 aaPredicted RBP13□□□□□ -0.33
PAPD4-204ENST00000453514 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
PAPD4-204ENST00000453514 EIF5BO60841 1220 aaKnown RBP12.99□□□□□ -0.33
PAPD4-204ENST00000453514 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
PAPD4-204ENST00000453514 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
PAPD4-204ENST00000453514 CCNB3Q8WWL7 1395 aa12.97□□□□□ -0.33
PAPD4-204ENST00000453514 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
PAPD4-204ENST00000453514 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
PAPD4-204ENST00000453514 RBM19Q9Y4C8 960 aaKnown RBP12.96□□□□□ -0.34
PAPD4-204ENST00000453514 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
PAPD4-204ENST00000453514 CCDC136Q96JN2 1154 aa12.95□□□□□ -0.34
PAPD4-204ENST00000453514 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
PAPD4-204ENST00000453514 MSH5O43196 834 aa12.93□□□□□ -0.34
PAPD4-204ENST00000453514 GRIN2BQ13224 1484 aa12.93□□□□□ -0.34
PAPD4-204ENST00000453514 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
PAPD4-204ENST00000453514 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
PAPD4-204ENST00000453514 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
PAPD4-204ENST00000453514 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
PAPD4-204ENST00000453514 THOC2Q8NI27 1593 aaKnown RBP12.9□□□□□ -0.34
PAPD4-204ENST00000453514 WDR62O43379 1518 aa12.89□□□□□ -0.35
PAPD4-204ENST00000453514 MAGI3Q5TCQ9 1506 aa12.89□□□□□ -0.35
PAPD4-204ENST00000453514 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
PAPD4-204ENST00000453514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.88□□□□□ -0.35
PAPD4-204ENST00000453514 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
PAPD4-204ENST00000453514 ITGAEP38570 1179 aa12.85□□□□□ -0.35
PAPD4-204ENST00000453514 RAB3GAP2Q9H2M9 1393 aa12.85□□□□□ -0.35
PAPD4-204ENST00000453514 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
PAPD4-204ENST00000453514 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
PAPD4-204ENST00000453514 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
PAPD4-204ENST00000453514 OSCARQ8IYS5 282 aa12.82□□□□□ -0.36
PAPD4-204ENST00000453514 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
PAPD4-204ENST00000453514 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
PAPD4-204ENST00000453514 UGGT2Q9NYU1 1516 aa12.81□□□□□ -0.36
PAPD4-204ENST00000453514 BCANQ96GW7 911 aa12.8□□□□□ -0.36
PAPD4-204ENST00000453514 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
PAPD4-204ENST00000453514 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
PAPD4-204ENST00000453514 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
PAPD4-204ENST00000453514 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
PAPD4-204ENST00000453514 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
PAPD4-204ENST00000453514 EHBP1L1Q8N3D4 1523 aa12.76□□□□□ -0.37
PAPD4-204ENST00000453514 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
PAPD4-204ENST00000453514 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
PAPD4-204ENST00000453514 DISP1Q96F81 1524 aa12.76□□□□□ -0.37
PAPD4-204ENST00000453514 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
PAPD4-204ENST00000453514 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
PAPD4-204ENST00000453514 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
PAPD4-204ENST00000453514 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
PAPD4-204ENST00000453514 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
PAPD4-204ENST00000453514 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 FANCIQ9NVI1 1328 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
PAPD4-204ENST00000453514 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.37
PAPD4-204ENST00000453514 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.37
PAPD4-204ENST00000453514 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
PAPD4-204ENST00000453514 CCDC18Q5T9S5 1454 aa12.7□□□□□ -0.38
PAPD4-204ENST00000453514 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
PAPD4-204ENST00000453514 KDM6BO15054 1643 aa12.7□□□□□ -0.38
PAPD4-204ENST00000453514 CEP170Q5SW79 1584 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms