RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 JPH4Q96JJ6 628 aa33.23■■■□□ 2.91
PMPCB-205ENST00000453466 KIAA0586Q9BVV6 1533 aa33.2■■■□□ 2.91
PMPCB-205ENST00000453466 FAM9AQ8IZU1 332 aaPredicted RBP33.2■■■□□ 2.91
PMPCB-205ENST00000453466 PRXQ9BXM0 1461 aa33.17■■■□□ 2.9
PMPCB-205ENST00000453466 CYB5RLQ6IPT4 315 aa33.17■■■□□ 2.9
PMPCB-205ENST00000453466 SHROOM2Q13796 1616 aa33.09■■■□□ 2.89
PMPCB-205ENST00000453466 PRG4Q92954 1404 aaPredicted RBP33.09■■■□□ 2.89
PMPCB-205ENST00000453466 ARAP1Q96P48 1450 aa33.09■■■□□ 2.89
PMPCB-205ENST00000453466 ERCC6L2Q5T890 1561 aa32.99■■■□□ 2.87
PMPCB-205ENST00000453466 IQGAP2Q13576 1575 aa32.96■■■□□ 2.87
PMPCB-205ENST00000453466 CARMIL2Q6F5E8 1435 aa32.88■■■□□ 2.85
PMPCB-205ENST00000453466 KIF21BO75037 1637 aa32.81■■■□□ 2.84
PMPCB-205ENST00000453466 UGGT2Q9NYU1 1516 aa32.81■■■□□ 2.84
PMPCB-205ENST00000453466 CTTNBP2Q8WZ74 1663 aa32.8■■■□□ 2.84
PMPCB-205ENST00000453466 TNIKQ9UKE5 1360 aa32.75■■■□□ 2.83
PMPCB-205ENST00000453466 EHMT2Q96KQ7 1210 aa32.75■■■□□ 2.83
PMPCB-205ENST00000453466 PTPRGP23470 1445 aa32.74■■■□□ 2.83
PMPCB-205ENST00000453466 DISP1Q96F81 1524 aa32.74■■■□□ 2.83
PMPCB-205ENST00000453466 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
PMPCB-205ENST00000453466 TTBK1Q5TCY1 1321 aaPredicted RBP32.72■■■□□ 2.83
PMPCB-205ENST00000453466 GOLGA3Q08378 1498 aa32.7■■■□□ 2.83
PMPCB-205ENST00000453466 KIAA0556O60303 1618 aa32.63■■■□□ 2.81
PMPCB-205ENST00000453466 RANGAP1P46060 587 aaPredicted RBP32.6■■■□□ 2.81
PMPCB-205ENST00000453466 NPM1P06748 294 aaKnown RBP eCLIP32.58■■■□□ 2.81
PMPCB-205ENST00000453466 P3H3Q8IVL6 736 aa32.56■■■□□ 2.8
PMPCB-205ENST00000453466 UACAQ9BZF9 1416 aa32.49■■■□□ 2.79
PMPCB-205ENST00000453466 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
PMPCB-205ENST00000453466 ADCY10Q96PN6 1610 aa32.45■■■□□ 2.79
PMPCB-205ENST00000453466 SAMD9Q5K651 1589 aa32.44■■■□□ 2.78
PMPCB-205ENST00000453466 UHRF1BP1LA0JNW5 1464 aa32.43■■■□□ 2.78
PMPCB-205ENST00000453466 EFCAB5A4FU69 1503 aa32.37■■■□□ 2.77
PMPCB-205ENST00000453466 ABCC2Q92887 1545 aa32.37■■■□□ 2.77
PMPCB-205ENST00000453466 PLB1Q6P1J6 1458 aa32.36■■■□□ 2.77
PMPCB-205ENST00000453466 FHOD3Q2V2M9 1422 aa32.33■■■□□ 2.77
PMPCB-205ENST00000453466 ABCA8O94911 1581 aa32.28■■■□□ 2.76
PMPCB-205ENST00000453466 MAPKBP1O60336 1514 aa32.27■■■□□ 2.76
PMPCB-205ENST00000453466 KDM5BQ9UGL1 1544 aa32.26■■■□□ 2.75
PMPCB-205ENST00000453466 ARHGAP35Q9NRY4 1499 aa32.25■■■□□ 2.75
PMPCB-205ENST00000453466 LOC105371045A0A1W2PR82 267 aa32.21■■■□□ 2.75
PMPCB-205ENST00000453466 ASXL2Q76L83 1435 aa32.17■■■□□ 2.74
PMPCB-205ENST00000453466 FAM69CQ0P6D2 419 aa32.16■■■□□ 2.74
PMPCB-205ENST00000453466 CLIP1P30622 1438 aa32.15■■■□□ 2.74
PMPCB-205ENST00000453466 FMN1Q68DA7 1419 aa32.15■■■□□ 2.74
PMPCB-205ENST00000453466 ABCC10Q5T3U5 1492 aa32.14■■■□□ 2.74
PMPCB-205ENST00000453466 ARID3CA6NKF2 412 aa32.14■■■□□ 2.74
PMPCB-205ENST00000453466 RAPGEF6Q8TEU7 1601 aa32.13■■■□□ 2.73
PMPCB-205ENST00000453466 ZCCHC11Q5TAX3 1644 aaKnown RBP32.12■■■□□ 2.73
PMPCB-205ENST00000453466 ATP10BO94823 1461 aa32.08■■■□□ 2.73
PMPCB-205ENST00000453466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.08■■■□□ 2.73
PMPCB-205ENST00000453466 HNRNPUL2Q1KMD3 747 aaKnown RBP32.08■■■□□ 2.73
PMPCB-205ENST00000453466 ATP1B4Q9UN42 357 aaPredicted RBP32.05■■■□□ 2.72
PMPCB-205ENST00000453466 NUP153P49790 1475 aaKnown RBP32.04■■■□□ 2.72
PMPCB-205ENST00000453466 CEP162Q5TB80 1403 aa32.01■■■□□ 2.71
PMPCB-205ENST00000453466 WDR7Q9Y4E6 1490 aa32.01■■■□□ 2.71
PMPCB-205ENST00000453466 DIP2BQ9P265 1576 aa32.01■■■□□ 2.71
PMPCB-205ENST00000453466 KCNH8Q96L42 1107 aa31.98■■■□□ 2.71
PMPCB-205ENST00000453466 KIF13AQ9H1H9 1805 aa31.97■■■□□ 2.71
PMPCB-205ENST00000453466 EPRSP07814 1512 aaKnown RBP31.95■■■□□ 2.71
PMPCB-205ENST00000453466 PLEKHD1A6NEE1 506 aa31.94■■■□□ 2.7
PMPCB-205ENST00000453466 GLI2P10070 1586 aa31.91■■■□□ 2.7
PMPCB-205ENST00000453466 HECW1Q76N89 1606 aa31.89■■■□□ 2.7
PMPCB-205ENST00000453466 CASKIN1Q8WXD9 1431 aa31.88■■■□□ 2.69
PMPCB-205ENST00000453466 CDK11AQ9UQ88 783 aaPredicted RBP31.85■■■□□ 2.69
PMPCB-205ENST00000453466 CDK13Q14004 1512 aaKnown RBP31.82■■■□□ 2.68
PMPCB-205ENST00000453466 FYCO1Q9BQS8 1478 aa31.78■■■□□ 2.68
PMPCB-205ENST00000453466 PCF11O94913 1555 aaKnown RBP31.78■■■□□ 2.68
PMPCB-205ENST00000453466 CD109Q6YHK3 1445 aa31.75■■■□□ 2.67
PMPCB-205ENST00000453466 CCDC18Q5T9S5 1454 aa31.73■■■□□ 2.67
PMPCB-205ENST00000453466 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
PMPCB-205ENST00000453466 TSPOAP1O95153 1857 aa31.71■■■□□ 2.67
PMPCB-205ENST00000453466 TEX14Q8IWB6 1497 aa31.67■■■□□ 2.66
PMPCB-205ENST00000453466 CFAP43Q8NDM7 1665 aa31.65■■■□□ 2.66
PMPCB-205ENST00000453466 MAGI3Q5TCQ9 1506 aa31.64■■■□□ 2.66
PMPCB-205ENST00000453466 TROQ12816 1431 aaPredicted RBP31.63■■■□□ 2.65
PMPCB-205ENST00000453466 ABCA9Q8IUA7 1624 aa31.63■■■□□ 2.65
PMPCB-205ENST00000453466 VPS8Q8N3P4 1428 aa31.62■■■□□ 2.65
PMPCB-205ENST00000453466 LRRIQ1Q96JM4 1722 aa31.6■■■□□ 2.65
PMPCB-205ENST00000453466 PPRC1Q5VV67 1664 aaKnown RBP31.6■■■□□ 2.65
PMPCB-205ENST00000453466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.55■■■□□ 2.64
PMPCB-205ENST00000453466 KDM6BO15054 1643 aa31.5■■■□□ 2.63
PMPCB-205ENST00000453466 PHLDB1Q86UU1 1377 aa31.49■■■□□ 2.63
PMPCB-205ENST00000453466 MTUS2Q5JR59 1369 aa31.48■■■□□ 2.63
PMPCB-205ENST00000453466 KIF14Q15058 1648 aa31.48■■■□□ 2.63
PMPCB-205ENST00000453466 TTC37Q6PGP7 1564 aa31.46■■■□□ 2.63
PMPCB-205ENST00000453466 PLCH2O75038 1416 aa31.44■■■□□ 2.62
PMPCB-205ENST00000453466 NEO1Q92859 1461 aa31.43■■■□□ 2.62
PMPCB-205ENST00000453466 COL17A1Q9UMD9 1497 aaPredicted RBP31.42■■■□□ 2.62
PMPCB-205ENST00000453466 APLP2Q06481 763 aa31.4■■■□□ 2.62
PMPCB-205ENST00000453466 EFCAB2Q5VUJ9 269 aa31.39■■■□□ 2.62
PMPCB-205ENST00000453466 FANCAO15360 1455 aa31.39■■■□□ 2.62
PMPCB-205ENST00000453466 ARAP3Q8WWN8 1544 aa31.36■■■□□ 2.61
PMPCB-205ENST00000453466 AKNAQ7Z591 1439 aa31.35■■■□□ 2.61
PMPCB-205ENST00000453466 TIAM1Q13009 1591 aa31.34■■■□□ 2.61
PMPCB-205ENST00000453466 MAP3K1Q13233 1512 aa31.32■■■□□ 2.6
PMPCB-205ENST00000453466 EHBP1L1Q8N3D4 1523 aa31.32■■■□□ 2.6
PMPCB-205ENST00000453466 CFAP74Q9C0B2 1584 aa31.3■■■□□ 2.6
PMPCB-205ENST00000453466 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
PMPCB-205ENST00000453466 CCNB3Q8WWL7 1395 aa31.28■■■□□ 2.6
PMPCB-205ENST00000453466 ARHGAP5Q13017 1502 aa31.27■■■□□ 2.6
PMPCB-205ENST00000453466 RAPGEF3O95398 923 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms